TAfinder detailed results
Overview
| Job ID | wrVbGpMxFf | ||
| Sequence name | NZ_CP026085.1 Escherichia coli strain DH5alpha chromosome, complete genome | ||
| Predicted type | II | ||
Orphan Antitoxin (Protein)
| Predicted family | NpoA (AT10134) | Predicted domain | - |
| Locus tag | orf1595 | Length | 253 a.a. |
| Coordinates | 1700978..1701739 (+) |
Genomic Context
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| orf1587 | 1696515..1697210 | - | 696 | ORF1587 | Predicted ORF by PRODIGAL Version 1.20 | - |
| orf1588 | 1697207..1697605 | - | 399 | ORF1588 | Predicted ORF by PRODIGAL Version 1.20 | - |
| orf1589 | 1697844..1698794 | + | 951 | ORF1589 | Predicted ORF by PRODIGAL Version 1.20 | - |
| orf1590 | 1699735..1700925 | + | 1191 | ORF1590 | Predicted ORF by PRODIGAL Version 1.20 | - |
| orf1591 | 1700978..1701739 | + | 762 | ORF1591 | Predicted ORF by PRODIGAL Version 1.20 | Antitoxin |
| orf1592 | 1701869..1702447 | - | 579 | ORF1592 | Predicted ORF by PRODIGAL Version 1.20 | - |
| orf1593 | 1702617..1703204 | + | 588 | ORF1593 | Predicted ORF by PRODIGAL Version 1.20 | - |
| orf1594 | 1703378..1704310 | + | 933 | ORF1594 | Predicted ORF by PRODIGAL Version 1.20 | - |
| orf1595 | 1704348..1706063 | - | 1716 | ORF1595 | Predicted ORF by PRODIGAL Version 1.20 | - |
Domains
The domains were predicted by HMMER and were sorted by score.
Orphan Antitoxin
No domain identified.
Sequences
Orphan Antitoxin
Download Length: Molecular weight: 26981.87 Da Isoelectric Point: 5.0962
>ORF1591 Orphan_TA_30 Antitoxin
MAQVAIITASDSGIGKECALLLAQQGFDIGITWHSDEEGAKDTAREVVSHGVRAEIVQLD
LGKLPEGAQALEKLIQRLGRIDVLVNNAGAMTKAPFLDMAFDEWRKIFTVDVDGAFLCSQ
IAARQMVKQGQGGRIINITSVHEHTPLPDASAYTAAKHALGGLTKTMALELVRHKILVNA
VAPGAIATPMNGMDDSDVKPDAEPSIPLRRFGATHEIASLVAWLCSEGANYTTGQSLIVD
GGFMLANPQFNPE
MAQVAIITASDSGIGKECALLLAQQGFDIGITWHSDEEGAKDTAREVVSHGVRAEIVQLD
LGKLPEGAQALEKLIQRLGRIDVLVNNAGAMTKAPFLDMAFDEWRKIFTVDVDGAFLCSQ
IAARQMVKQGQGGRIINITSVHEHTPLPDASAYTAAKHALGGLTKTMALELVRHKILVNA
VAPGAIATPMNGMDDSDVKPDAEPSIPLRRFGATHEIASLVAWLCSEGANYTTGQSLIVD
GGFMLANPQFNPE
Download Length: 762 bp
>ORF1591 Orphan_TA_30 Antitoxin
ATGGCACAGGTTGCGATTATTACCGCCTCCGATTCGGGGATCGGCAAAGAGTGCGCGTTA
TTACTGGCGCAGCAGGGGTTTGATATTGGCATTACCTGGCACTCAGATGAAGAAGGGGCA
AAAGATACCGCGCGTGAGGTAGTTAGCCACGGCGTACGTGCGGAGATCGTGCAGCTGGAT
CTCGGTAAACTGCCAGAAGGTGCGCAGGCGCTGGAGAAACTCATTCAACGGCTGGGGCGT
ATTGATGTGCTGGTGAATAATGCGGGCGCAATGACCAAAGCGCCGTTTCTTGATATGGCT
TTCGATGAGTGGCGCAAGATTTTTACCGTTGATGTCGATGGTGCATTTTTATGCTCACAA
ATTGCGGCCCGCCAGATGGTGAAACAAGGGCAGGGCGGTCGCATCATCAACATTACGTCG
GTACATGAACATACGCCGCTGCCGGATGCCAGCGCTTACACAGCCGCTAAACATGCGCTC
GGCGGGTTAACCAAAACGATGGCGCTGGAGCTGGTCAGGCATAAGATTTTGGTGAACGCA
GTCGCGCCTGGGGCGATCGCCACGCCAATGAATGGCATGGATGACAGCGACGTGAAGCCC
GACGCGGAGCCTTCGATTCCTCTGCGGCGTTTTGGCGCAACGCATGAGATTGCCAGCCTG
GTAGCGTGGCTGTGCTCAGAGGGCGCAAATTACACCACCGGGCAGTCGTTGATAGTGGAT
GGCGGCTTTATGTTGGCGAATCCGCAGTTCAACCCAGAATAG
ATGGCACAGGTTGCGATTATTACCGCCTCCGATTCGGGGATCGGCAAAGAGTGCGCGTTA
TTACTGGCGCAGCAGGGGTTTGATATTGGCATTACCTGGCACTCAGATGAAGAAGGGGCA
AAAGATACCGCGCGTGAGGTAGTTAGCCACGGCGTACGTGCGGAGATCGTGCAGCTGGAT
CTCGGTAAACTGCCAGAAGGTGCGCAGGCGCTGGAGAAACTCATTCAACGGCTGGGGCGT
ATTGATGTGCTGGTGAATAATGCGGGCGCAATGACCAAAGCGCCGTTTCTTGATATGGCT
TTCGATGAGTGGCGCAAGATTTTTACCGTTGATGTCGATGGTGCATTTTTATGCTCACAA
ATTGCGGCCCGCCAGATGGTGAAACAAGGGCAGGGCGGTCGCATCATCAACATTACGTCG
GTACATGAACATACGCCGCTGCCGGATGCCAGCGCTTACACAGCCGCTAAACATGCGCTC
GGCGGGTTAACCAAAACGATGGCGCTGGAGCTGGTCAGGCATAAGATTTTGGTGAACGCA
GTCGCGCCTGGGGCGATCGCCACGCCAATGAATGGCATGGATGACAGCGACGTGAAGCCC
GACGCGGAGCCTTCGATTCCTCTGCGGCGTTTTGGCGCAACGCATGAGATTGCCAGCCTG
GTAGCGTGGCTGTGCTCAGAGGGCGCAAATTACACCACCGGGCAGTCGTTGATAGTGGAT
GGCGGCTTTATGTTGGCGAATCCGCAGTTCAACCCAGAATAG
Similar Proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| AT10134 | Acetobacter pasteurianus strain Ab3 |
32.51 |
85.563 |
0.312 |