TAfinder detailed results
Overview
| Job ID | wrVbGpMxFf | ||
| Sequence name | NZ_CP026085.1 Escherichia coli strain DH5alpha chromosome, complete genome | ||
| Predicted type | II | ||
Orphan Antitoxin (Protein)
| Predicted family | higA (AT10133) | Predicted domain | - |
| Locus tag | orf1394 | Length | 151 a.a. |
| Coordinates | 1469641..1470096 (+) |
Genomic Context
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| orf1385 | 1465303..1466598 | + | 1296 | ORF1385 | Predicted ORF by PRODIGAL Version 1.20 | - |
| orf1386 | 1466643..1466897 | + | 255 | ORF1386 | Predicted ORF by PRODIGAL Version 1.20 | - |
| orf1387 | 1466875..1467375 | + | 501 | ORF1387 | Predicted ORF by PRODIGAL Version 1.20 | - |
| orf1388 | 1467375..1468793 | + | 1419 | ORF1388 | Predicted ORF by PRODIGAL Version 1.20 | - |
| orf1389 | 1468793..1469641 | + | 849 | ORF1389 | Predicted ORF by PRODIGAL Version 1.20 | - |
| orf1390 | 1469641..1470096 | + | 456 | ORF1390 | Predicted ORF by PRODIGAL Version 1.20 | Antitoxin |
| orf1391 | 1470099..1470791 | + | 693 | ORF1391 | Predicted ORF by PRODIGAL Version 1.20 | - |
| orf1392 | 1470801..1472189 | + | 1389 | ORF1392 | Predicted ORF by PRODIGAL Version 1.20 | - |
| orf1393 | 1472189..1474186 | + | 1998 | ORF1393 | Predicted ORF by PRODIGAL Version 1.20 | - |
| orf1394 | 1474276..1474536 | - | 261 | ORF1394 | Predicted ORF by PRODIGAL Version 1.20 | - |
Domains
The domains were predicted by HMMER and were sorted by score.
Orphan Antitoxin
No domain identified.
Sequences
Orphan Antitoxin
Download Length: Molecular weight: 17413.93 Da Isoelectric Point: 7.7389
>ORF1390 Orphan_TA_28 Antitoxin
MIQFKPTRNIDLIEAVGNHPDIIAGSNNGDGYDYKPECRYFEVNVHGQFGGIVYYQEIQP
LTFDCHAMYLPEVRGFSKEIGMAFWRYILTNTTVQCVTSFAARKFRHGQMYCAMIGLKRV
GTIKKYFKGVDDVTFYSATREELIDFLNHGR
MIQFKPTRNIDLIEAVGNHPDIIAGSNNGDGYDYKPECRYFEVNVHGQFGGIVYYQEIQP
LTFDCHAMYLPEVRGFSKEIGMAFWRYILTNTTVQCVTSFAARKFRHGQMYCAMIGLKRV
GTIKKYFKGVDDVTFYSATREELIDFLNHGR
Download Length: 456 bp
>ORF1390 Orphan_TA_28 Antitoxin
ATGATTCAGTTCAAACCAACGCGAAACATCGACCTGATAGAAGCAGTCGGAAATCACCCT
GACATTATTGCCGGAAGCAACAACGGTGATGGATACGACTACAAGCCTGAATGCCGTTAC
TTTGAGGTGAACGTGCACGGTCAGTTTGGCGGCATTGTTTACTATCAGGAGATTCAGCCG
CTGACATTCGATTGCCACGCCATGTACCTGCCAGAGGTTCGTGGATTCAGCAAGGAAATC
GGGATGGCGTTCTGGCGATACATTCTGACTAACACCACCGTTCAGTGCGTCACATCGTTC
GCTGCGCGCAAATTCCGCCACGGTCAGATGTACTGCGCAATGATTGGCCTTAAGCGAGTA
GGAACCATCAAGAAATACTTCAAAGGCGTGGATGACGTGACGTTTTACAGCGCCACACGC
GAAGAACTAATCGACTTCCTGAATCACGGGAGATAG
ATGATTCAGTTCAAACCAACGCGAAACATCGACCTGATAGAAGCAGTCGGAAATCACCCT
GACATTATTGCCGGAAGCAACAACGGTGATGGATACGACTACAAGCCTGAATGCCGTTAC
TTTGAGGTGAACGTGCACGGTCAGTTTGGCGGCATTGTTTACTATCAGGAGATTCAGCCG
CTGACATTCGATTGCCACGCCATGTACCTGCCAGAGGTTCGTGGATTCAGCAAGGAAATC
GGGATGGCGTTCTGGCGATACATTCTGACTAACACCACCGTTCAGTGCGTCACATCGTTC
GCTGCGCGCAAATTCCGCCACGGTCAGATGTACTGCGCAATGATTGGCCTTAAGCGAGTA
GGAACCATCAAGAAATACTTCAAAGGCGTGGATGACGTGACGTTTTACAGCGCCACACGC
GAAGAACTAATCGACTTCCTGAATCACGGGAGATAG
Similar Proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| AT10133 | Acetobacter pasteurianus strain Ab3 |
41.379 |
8.011 |
0.079 |