TAfinder detailed results
Overview
| Job ID | wrVbGpMxFf | ||
| Sequence name | NZ_CP026085.1 Escherichia coli strain DH5alpha chromosome, complete genome | ||
| Predicted type | II | ||
Orphan Antitoxin (Protein)
| Predicted family | higA (AT325) | Predicted domain | smart00530 (HTH_XRE) |
| Locus tag | orf1367 | Length | 217 a.a. |
| Coordinates | 1449033..1449686 (-) |
Genomic Context
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| orf1349 | 1444396..1444689 | - | 294 | ORF1349 | Predicted ORF by PRODIGAL Version 1.20 | - |
| orf1350 | 1444706..1445254 | - | 549 | ORF1350 | Predicted ORF by PRODIGAL Version 1.20 | - |
| orf1351 | 1445263..1445778 | - | 516 | ORF1351 | Predicted ORF by PRODIGAL Version 1.20 | - |
| orf1352 | 1445779..1446486 | - | 708 | ORF1352 | Predicted ORF by PRODIGAL Version 1.20 | - |
| orf1353 | 1446586..1446744 | - | 159 | ORF1353 | Predicted ORF by PRODIGAL Version 1.20 | - |
| orf1354 | 1446741..1446911 | - | 171 | ORF1354 | Predicted ORF by PRODIGAL Version 1.20 | - |
| orf1355 | 1447097..1447285 | - | 189 | ORF1355 | Predicted ORF by PRODIGAL Version 1.20 | - |
| orf1356 | 1447285..1447614 | - | 330 | ORF1356 | Predicted ORF by PRODIGAL Version 1.20 | - |
| orf1357 | 1447667..1448032 | - | 366 | ORF1357 | Predicted ORF by PRODIGAL Version 1.20 | - |
| orf1358 | 1448090..1448368 | - | 279 | ORF1358 | Predicted ORF by PRODIGAL Version 1.20 | - |
| orf1359 | 1448371..1448679 | - | 309 | ORF1359 | Predicted ORF by PRODIGAL Version 1.20 | - |
| orf1360 | 1449033..1449686 | - | 654 | ORF1360 | Predicted ORF by PRODIGAL Version 1.20 | Antitoxin |
| orf1361 | 1449804..1450019 | + | 216 | ORF1361 | Predicted ORF by PRODIGAL Version 1.20 | - |
| orf1362 | 1450129..1450425 | + | 297 | ORF1362 | Predicted ORF by PRODIGAL Version 1.20 | - |
| orf1363 | 1450458..1450604 | + | 147 | ORF1363 | Predicted ORF by PRODIGAL Version 1.20 | - |
| orf1364 | 1450597..1451496 | + | 900 | ORF1364 | Predicted ORF by PRODIGAL Version 1.20 | - |
| orf1365 | 1451486..1452922 | + | 1437 | ORF1365 | Predicted ORF by PRODIGAL Version 1.20 | - |
| orf1366 | 1453317..1453763 | + | 447 | ORF1366 | Predicted ORF by PRODIGAL Version 1.20 | - |
| orf1367 | 1453760..1454287 | + | 528 | ORF1367 | Predicted ORF by PRODIGAL Version 1.20 | - |
Domains
The domains were predicted by HMMER and were sorted by score.
Orphan Antitoxin
No domain identified.
Sequences
Orphan Antitoxin
Download Length: Molecular weight: 24142.36 Da Isoelectric Point: 4.9398
>ORF1360 Orphan_TA_26 Antitoxin
MKWYELARSRMKELGITQEKLAEELGMTQGGIGHWLRGSRHPSLDEIGVVFKYLGIDNVS
FNHDGTFSPAGEYSSAPVKKQYEYPVFSHVQAGMFSPELRTFTKGDAERWVSTTKKASDC
AFWLEVEGNSMTAPTGSKPSFPDGMLILVDPEQAVEPGDFCIARLGGDEFTFKKLIRDSG
QVFLQPLNPQYPMIPCNDSCSVVGKVIASQWPEETFS
MKWYELARSRMKELGITQEKLAEELGMTQGGIGHWLRGSRHPSLDEIGVVFKYLGIDNVS
FNHDGTFSPAGEYSSAPVKKQYEYPVFSHVQAGMFSPELRTFTKGDAERWVSTTKKASDC
AFWLEVEGNSMTAPTGSKPSFPDGMLILVDPEQAVEPGDFCIARLGGDEFTFKKLIRDSG
QVFLQPLNPQYPMIPCNDSCSVVGKVIASQWPEETFS
Download Length: 654 bp
>ORF1360 Orphan_TA_26 Antitoxin
TTAACTAAATGTCTCTTCAGGCCACTGGCTGGCGATAACTTTCCCTACTACGGAACAGCT
ATCATTGCATGGGATCATTGGATATTGCGGGTTTAGTGGTTGTAGGAACACCTGACCGCT
ATCCCTGATCAGTTTCTTGAAGGTAAACTCGTCACCGCCAAGTCTGGCTATGCAGAAATC
TCCTGGCTCAACAGCCTGCTCAGGGTCAACGAGAATTAACATTCCGTCAGGAAAGCTTGG
CTTGGATCCTGTTGGTGCGGTCATGGAATTACCTTCAACTTCAAGCCAAAACGCACAATC
ACTGGCTTTTTTGGTTGTGCTGACCCATCTCTCCGCATCACCTTTGGTAAAGGTTCTAAG
CTCAGGCGAGAACATCCCGGCCTGAACATGAGAAAAAACAGGGTACTCATATTGTTTTTT
AACGGGGGCAGATGAGTATTCGCCAGCAGGTGAAAATGTACCGTCGTGGTTGAATGAGAC
GTTATCAATACCAAGGTATTTAAACACCACACCAATCTCGTCAAGAGATGGATGACGAGA
TCCGCGCAACCAGTGACCAATTCCACCCTGCGTCATACCAAGCTCTTCAGCTAACTTCTC
TTGAGTTATGCCGAGCTCTTTCATTCTGGATCTAGCCAGTTCATACCATTTCAT
TTAACTAAATGTCTCTTCAGGCCACTGGCTGGCGATAACTTTCCCTACTACGGAACAGCT
ATCATTGCATGGGATCATTGGATATTGCGGGTTTAGTGGTTGTAGGAACACCTGACCGCT
ATCCCTGATCAGTTTCTTGAAGGTAAACTCGTCACCGCCAAGTCTGGCTATGCAGAAATC
TCCTGGCTCAACAGCCTGCTCAGGGTCAACGAGAATTAACATTCCGTCAGGAAAGCTTGG
CTTGGATCCTGTTGGTGCGGTCATGGAATTACCTTCAACTTCAAGCCAAAACGCACAATC
ACTGGCTTTTTTGGTTGTGCTGACCCATCTCTCCGCATCACCTTTGGTAAAGGTTCTAAG
CTCAGGCGAGAACATCCCGGCCTGAACATGAGAAAAAACAGGGTACTCATATTGTTTTTT
AACGGGGGCAGATGAGTATTCGCCAGCAGGTGAAAATGTACCGTCGTGGTTGAATGAGAC
GTTATCAATACCAAGGTATTTAAACACCACACCAATCTCGTCAAGAGATGGATGACGAGA
TCCGCGCAACCAGTGACCAATTCCACCCTGCGTCATACCAAGCTCTTCAGCTAACTTCTC
TTGAGTTATGCCGAGCTCTTTCATTCTGGATCTAGCCAGTTCATACCATTTCAT
Similar Proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| AT325 | Streptococcus pneumoniae TIGR4 |
39.216 |
52.577 |
0.092 |