TAfinder detailed results
Overview
| Job ID | wrVbGpMxFf | ||
| Sequence name | NZ_CP026085.1 Escherichia coli strain DH5alpha chromosome, complete genome | ||
| Predicted type | II | ||
Orphan Antitoxin (Protein)
| Predicted family | ata (AT6025) | Predicted domain | - |
| Locus tag | orf1363 | Length | 171 a.a. |
| Coordinates | 1445263..1445778 (-) |
Genomic Context
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| orf1343 | 1440658..1441458 | - | 801 | ORF1343 | Predicted ORF by PRODIGAL Version 1.20 | - |
| orf1344 | 1441501..1441785 | - | 285 | ORF1344 | Predicted ORF by PRODIGAL Version 1.20 | - |
| orf1345 | 1441778..1442467 | - | 690 | ORF1345 | Predicted ORF by PRODIGAL Version 1.20 | - |
| orf1346 | 1442469..1443068 | - | 600 | ORF1346 | Predicted ORF by PRODIGAL Version 1.20 | - |
| orf1347 | 1443065..1443709 | - | 645 | ORF1347 | Predicted ORF by PRODIGAL Version 1.20 | - |
| orf1348 | 1443706..1444224 | - | 519 | ORF1348 | Predicted ORF by PRODIGAL Version 1.20 | - |
| orf1349 | 1444396..1444689 | - | 294 | ORF1349 | Predicted ORF by PRODIGAL Version 1.20 | - |
| orf1350 | 1444706..1445254 | - | 549 | ORF1350 | Predicted ORF by PRODIGAL Version 1.20 | - |
| orf1351 | 1445263..1445778 | - | 516 | ORF1351 | Predicted ORF by PRODIGAL Version 1.20 | Antitoxin |
| orf1352 | 1445779..1446486 | - | 708 | ORF1352 | Predicted ORF by PRODIGAL Version 1.20 | - |
| orf1353 | 1446586..1446744 | - | 159 | ORF1353 | Predicted ORF by PRODIGAL Version 1.20 | - |
| orf1354 | 1446741..1446911 | - | 171 | ORF1354 | Predicted ORF by PRODIGAL Version 1.20 | - |
| orf1355 | 1447097..1447285 | - | 189 | ORF1355 | Predicted ORF by PRODIGAL Version 1.20 | - |
| orf1356 | 1447285..1447614 | - | 330 | ORF1356 | Predicted ORF by PRODIGAL Version 1.20 | - |
| orf1357 | 1447667..1448032 | - | 366 | ORF1357 | Predicted ORF by PRODIGAL Version 1.20 | - |
| orf1358 | 1448090..1448368 | - | 279 | ORF1358 | Predicted ORF by PRODIGAL Version 1.20 | - |
| orf1359 | 1448371..1448679 | - | 309 | ORF1359 | Predicted ORF by PRODIGAL Version 1.20 | - |
| orf1360 | 1449033..1449686 | - | 654 | ORF1360 | Predicted ORF by PRODIGAL Version 1.20 | - |
| orf1361 | 1449804..1450019 | + | 216 | ORF1361 | Predicted ORF by PRODIGAL Version 1.20 | - |
| orf1362 | 1450129..1450425 | + | 297 | ORF1362 | Predicted ORF by PRODIGAL Version 1.20 | - |
| orf1363 | 1450458..1450604 | + | 147 | ORF1363 | Predicted ORF by PRODIGAL Version 1.20 | - |
Domains
The domains were predicted by HMMER and were sorted by score.
Orphan Antitoxin
No domain identified.
Sequences
Orphan Antitoxin
Download Length: Molecular weight: 19283.54 Da Isoelectric Point: 8.5373
>ORF1351 Orphan_TA_25 Antitoxin
MASRGVNKVIIIGRLGHDPEIRYSPSGTAFANLTVATSEQWRDKKTGEQKEQTEWHRVVM
SWKLAEIASEYLRKGSEVYLEGKLRTRKWQDQSGQDRFTTEVIVGVGGTMQMLGGKQGGN
EQSSPQRNNGQQQRQQPQQQGNHSEPPMDFDDDIPFAPVTLPFPRHAIHAI
MASRGVNKVIIIGRLGHDPEIRYSPSGTAFANLTVATSEQWRDKKTGEQKEQTEWHRVVM
SWKLAEIASEYLRKGSEVYLEGKLRTRKWQDQSGQDRFTTEVIVGVGGTMQMLGGKQGGN
EQSSPQRNNGQQQRQQPQQQGNHSEPPMDFDDDIPFAPVTLPFPRHAIHAI
Download Length: 516 bp
>ORF1351 Orphan_TA_25 Antitoxin
TTAAATTGCGTGAATAGCGTGACGAGGGAAGGGGAGAGTTACTGGTGCAAAGGGGATATC
GTCGTCAAAATCCATAGGTGGTTCGCTGTGATTTCCCTGCTGCTGAGGTTGCTGTCTTTG
TTGCTGACCATTATTTCGCTGAGGTGAAGACTGTTCATTGCCTCCTTGCTTGCCACCAAG
CATTTGCATGGTTCCACCAACGCCCACGATGACTTCGGTAGTGAACCGATCCTGTCCGCT
TTGATCCTGCCATTTTCTTGTCCGCAATTTGCCTTCAAGATAAACCTCAGAGCCTTTTCG
CAGATATTCGCTGGCAATTTCTGCCAGTTTCCAGCTCATTACCACGCGGTGCCACTCCGT
CTGCTCCTTTTGCTCTCCAGTTTTCTTATCACGCCATTGTTCTGACGTAGCAACGGTAAG
GTTTGCAAATGCCGTTCCTGATGGTGAATATCTGATTTCTGGATCATGCCCAAGGCGACC
AATAATGATCACCTTATTTACGCCTCTGCTTGCCAT
TTAAATTGCGTGAATAGCGTGACGAGGGAAGGGGAGAGTTACTGGTGCAAAGGGGATATC
GTCGTCAAAATCCATAGGTGGTTCGCTGTGATTTCCCTGCTGCTGAGGTTGCTGTCTTTG
TTGCTGACCATTATTTCGCTGAGGTGAAGACTGTTCATTGCCTCCTTGCTTGCCACCAAG
CATTTGCATGGTTCCACCAACGCCCACGATGACTTCGGTAGTGAACCGATCCTGTCCGCT
TTGATCCTGCCATTTTCTTGTCCGCAATTTGCCTTCAAGATAAACCTCAGAGCCTTTTCG
CAGATATTCGCTGGCAATTTCTGCCAGTTTCCAGCTCATTACCACGCGGTGCCACTCCGT
CTGCTCCTTTTGCTCTCCAGTTTTCTTATCACGCCATTGTTCTGACGTAGCAACGGTAAG
GTTTGCAAATGCCGTTCCTGATGGTGAATATCTGATTTCTGGATCATGCCCAAGGCGACC
AATAATGATCACCTTATTTACGCCTCTGCTTGCCAT
Similar Proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| AT6025 | Pseudomonas sp. LM13 |
40.741 |
24.324 |
0.064 |