TAfinder detailed results
Overview
| Job ID | wrVbGpMxFf | ||
| Sequence name | NZ_CP026085.1 Escherichia coli strain DH5alpha chromosome, complete genome | ||
| Predicted type | II | ||
Orphan Antitoxin (Protein)
| Predicted family | NpoA (AT10134) | Predicted domain | - |
| Locus tag | orf1290 | Length | 263 a.a. |
| Coordinates | 1374945..1375736 (+) |
Genomic Context
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| orf1282 | 1370162..1371466 | - | 1305 | ORF1282 | Predicted ORF by PRODIGAL Version 1.20 | - |
| orf1283 | 1371471..1372895 | - | 1425 | ORF1283 | Predicted ORF by PRODIGAL Version 1.20 | - |
| orf1284 | 1372899..1373795 | - | 897 | ORF1284 | Predicted ORF by PRODIGAL Version 1.20 | - |
| orf1285 | 1373959..1374816 | + | 858 | ORF1285 | Predicted ORF by PRODIGAL Version 1.20 | - |
| orf1286 | 1374945..1375736 | + | 792 | ORF1286 | Predicted ORF by PRODIGAL Version 1.20 | Antitoxin |
| orf1287 | 1375907..1376923 | + | 1017 | ORF1287 | Predicted ORF by PRODIGAL Version 1.20 | - |
| orf1288 | 1376923..1377756 | + | 834 | ORF1288 | Predicted ORF by PRODIGAL Version 1.20 | - |
| orf1289 | 1377756..1378631 | + | 876 | ORF1289 | Predicted ORF by PRODIGAL Version 1.20 | - |
| orf1290 | 1378621..1379718 | + | 1098 | ORF1290 | Predicted ORF by PRODIGAL Version 1.20 | - |
Domains
The domains were predicted by HMMER and were sorted by score.
Orphan Antitoxin
No domain identified.
Sequences
Orphan Antitoxin
Download Length: Molecular weight: 27864.00 Da Isoelectric Point: 4.8975
>ORF1286 Orphan_TA_23 Antitoxin
MGKLTGKTALITGALQGIGEGIARTFARHGANLILLDISPEIEKLADELCGRGHRCTAVV
ADVRDPASVAAAIKRAKEKEGRIDILVNNAGVCRLGSFLDMSDEDRDFHIDINIKGVWNV
TKAVLPEMIARKDGRIVMMSSVTGDMVADPGETAYALTKAAIVGLTKSLAVEYAQSGIRV
NAICPGYVRTPMAESIARQSNPEDPESVLTEMAKAIPMRRLADPLEVGELAAFLASDESS
YLTGTQNVIDGGSTLPETVSVGI
MGKLTGKTALITGALQGIGEGIARTFARHGANLILLDISPEIEKLADELCGRGHRCTAVV
ADVRDPASVAAAIKRAKEKEGRIDILVNNAGVCRLGSFLDMSDEDRDFHIDINIKGVWNV
TKAVLPEMIARKDGRIVMMSSVTGDMVADPGETAYALTKAAIVGLTKSLAVEYAQSGIRV
NAICPGYVRTPMAESIARQSNPEDPESVLTEMAKAIPMRRLADPLEVGELAAFLASDESS
YLTGTQNVIDGGSTLPETVSVGI
Download Length: 792 bp
>ORF1286 Orphan_TA_23 Antitoxin
ATGGGTAAACTCACGGGCAAGACAGCACTGATTACGGGCGCATTGCAGGGAATTGGCGAA
GGAATTGCCAGAACTTTTGCGCGTCATGGCGCAAACCTAATCTTGCTGGATATCTCCCCT
GAGATCGAAAAGCTGGCGGACGAACTGTGTGGTCGTGGTCATCGCTGTACGGCGGTTGTC
GCCGATGTGCGTGACCCGGCGTCGGTAGCCGCAGCTATCAAACGCGCGAAGGAAAAAGAA
GGGCGCATTGATATCCTGGTGAATAACGCAGGCGTTTGTCGTCTGGGCAGTTTCCTCGAT
ATGAGCGATGAAGATCGCGATTTCCATATTGACATCAATATTAAAGGCGTATGGAACGTC
ACGAAGGCGGTGCTGCCAGAGATGATTGCGCGCAAAGATGGTCGCATTGTGATGATGTCT
TCAGTCACTGGTGATATGGTGGCCGATCCTGGCGAAACGGCGTACGCCTTAACGAAAGCG
GCGATTGTTGGCCTGACAAAATCGCTGGCGGTGGAGTACGCGCAGTCTGGTATTCGCGTT
AACGCCATTTGCCCGGGATACGTGCGCACACCAATGGCGGAAAGCATTGCCCGCCAGTCG
AACCCGGAAGATCCAGAGTCGGTGCTGACTGAAATGGCGAAAGCAATCCCGATGCGTCGC
CTCGCCGATCCGCTGGAAGTCGGCGAACTGGCGGCCTTCCTCGCATCGGATGAATCCAGC
TATTTAACCGGTACACAGAATGTGATTGATGGCGGCAGCACACTGCCGGAGACGGTTAGC
GTCGGTATCTGA
ATGGGTAAACTCACGGGCAAGACAGCACTGATTACGGGCGCATTGCAGGGAATTGGCGAA
GGAATTGCCAGAACTTTTGCGCGTCATGGCGCAAACCTAATCTTGCTGGATATCTCCCCT
GAGATCGAAAAGCTGGCGGACGAACTGTGTGGTCGTGGTCATCGCTGTACGGCGGTTGTC
GCCGATGTGCGTGACCCGGCGTCGGTAGCCGCAGCTATCAAACGCGCGAAGGAAAAAGAA
GGGCGCATTGATATCCTGGTGAATAACGCAGGCGTTTGTCGTCTGGGCAGTTTCCTCGAT
ATGAGCGATGAAGATCGCGATTTCCATATTGACATCAATATTAAAGGCGTATGGAACGTC
ACGAAGGCGGTGCTGCCAGAGATGATTGCGCGCAAAGATGGTCGCATTGTGATGATGTCT
TCAGTCACTGGTGATATGGTGGCCGATCCTGGCGAAACGGCGTACGCCTTAACGAAAGCG
GCGATTGTTGGCCTGACAAAATCGCTGGCGGTGGAGTACGCGCAGTCTGGTATTCGCGTT
AACGCCATTTGCCCGGGATACGTGCGCACACCAATGGCGGAAAGCATTGCCCGCCAGTCG
AACCCGGAAGATCCAGAGTCGGTGCTGACTGAAATGGCGAAAGCAATCCCGATGCGTCGC
CTCGCCGATCCGCTGGAAGTCGGCGAACTGGCGGCCTTCCTCGCATCGGATGAATCCAGC
TATTTAACCGGTACACAGAATGTGATTGATGGCGGCAGCACACTGCCGGAGACGGTTAGC
GTCGGTATCTGA
Similar Proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| AT10134 | Acetobacter pasteurianus strain Ab3 |
31.907 |
90.493 |
0.312 |