TAfinder detailed results
Overview
| Job ID | wrVbGpMxFf | ||
| Sequence name | NZ_CP026085.1 Escherichia coli strain DH5alpha chromosome, complete genome | ||
| Predicted type | II | ||
Orphan Toxin (Protein)
| Predicted family | vapC (T87) | Predicted domain | - |
| Locus tag | orf1041 | Length | 136 a.a. |
| Coordinates | 1106104..1106514 (+) |
Genomic Context
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| orf1033 | 1102138..1103061 | + | 924 | ORF1033 | Predicted ORF by PRODIGAL Version 1.20 | - |
| orf1034 | 1103079..1104788 | + | 1710 | ORF1034 | Predicted ORF by PRODIGAL Version 1.20 | - |
| orf1035 | 1104798..1105340 | + | 543 | ORF1035 | Predicted ORF by PRODIGAL Version 1.20 | - |
| orf1036 | 1105340..1106107 | + | 768 | ORF1036 | Predicted ORF by PRODIGAL Version 1.20 | - |
| orf1037 | 1106104..1106514 | + | 411 | ORF1037 | Predicted ORF by PRODIGAL Version 1.20 | Toxin |
| orf1038 | 1106507..1106977 | + | 471 | ORF1038 | Predicted ORF by PRODIGAL Version 1.20 | - |
| orf1039 | 1107136..1108560 | - | 1425 | ORF1039 | Predicted ORF by PRODIGAL Version 1.20 | - |
| orf1040 | 1108569..1110026 | - | 1458 | ORF1040 | Predicted ORF by PRODIGAL Version 1.20 | - |
| orf1041 | 1110283..1111296 | + | 1014 | ORF1041 | Predicted ORF by PRODIGAL Version 1.20 | - |
Domains
The domains were predicted by HMMER and were sorted by score.
Orphan Toxin
No domain identified.
Sequences
Orphan Toxin
Download Length: Molecular weight: 15464.66 Da Isoelectric Point: 4.9322
>ORF1037 Orphan_TA_20 Toxin
MSEKVVFSQLSRKFIDENDATPAEAQQVVYYSLAIGHHLGVIDCLEAALTCPWDEYLAWI
ATLEAGSEARRKMEGVPKYGEIVIDINHVPMLANAFDKARAAQTSQQQEWSTMLLSMLHD
IHQENAIYLMVRRLRD
MSEKVVFSQLSRKFIDENDATPAEAQQVVYYSLAIGHHLGVIDCLEAALTCPWDEYLAWI
ATLEAGSEARRKMEGVPKYGEIVIDINHVPMLANAFDKARAAQTSQQQEWSTMLLSMLHD
IHQENAIYLMVRRLRD
Download Length: 411 bp
>ORF1037 Orphan_TA_20 Toxin
ATGAGTGAAAAGGTGGTGTTCAGTCAACTGAGCCGTAAATTTATTGATGAGAACGATGCC
ACGCCCGCCGAGGCGCAGCAGGTGGTCTATTACAGCCTGGCGATTGGTCACCACCTTGGG
GTTATCGATTGCCTGGAAGCGGCGCTCACCTGCCCGTGGGATGAATATCTGGCATGGATT
GCCACTCTGGAGGCGGGCAGCGAAGCCCGCCGCAAAATGGAAGGCGTGCCGAAATATGGT
GAGATCGTCATCGATATTAACCATGTGCCGATGCTGGCCAACGCATTCGATAAAGCCCGG
GCAGCGCAAACTTCGCAGCAGCAGGAATGGAGTACAATGCTGTTAAGTATGCTGCATGAT
ATTCATCAGGAAAACGCCATCTATTTGATGGTGAGGAGATTGCGTGACTGA
ATGAGTGAAAAGGTGGTGTTCAGTCAACTGAGCCGTAAATTTATTGATGAGAACGATGCC
ACGCCCGCCGAGGCGCAGCAGGTGGTCTATTACAGCCTGGCGATTGGTCACCACCTTGGG
GTTATCGATTGCCTGGAAGCGGCGCTCACCTGCCCGTGGGATGAATATCTGGCATGGATT
GCCACTCTGGAGGCGGGCAGCGAAGCCCGCCGCAAAATGGAAGGCGTGCCGAAATATGGT
GAGATCGTCATCGATATTAACCATGTGCCGATGCTGGCCAACGCATTCGATAAAGCCCGG
GCAGCGCAAACTTCGCAGCAGCAGGAATGGAGTACAATGCTGTTAAGTATGCTGCATGAT
ATTCATCAGGAAAACGCCATCTATTTGATGGTGAGGAGATTGCGTGACTGA
Similar Proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| T87 | Mycobacterium tuberculosis H37Rv |
39.394 |
23.239 |
0.096 |