TAfinder detailed results
Overview
| Job ID | wrVbGpMxFf | ||
| Sequence name | NZ_CP026085.1 Escherichia coli strain DH5alpha chromosome, complete genome | ||
| Predicted type | II | ||
Orphan Antitoxin (Protein)
| Predicted family | higA (AT171) | Predicted domain | - |
| Locus tag | orf634 | Length | 167 a.a. |
| Coordinates | 658726..659229 (-) |
Genomic Context
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| orf627 | 654010..655254 | - | 1245 | ORF627 | Predicted ORF by PRODIGAL Version 1.20 | - |
| orf628 | 655653..656618 | - | 966 | ORF628 | Predicted ORF by PRODIGAL Version 1.20 | - |
| orf629 | 656901..657887 | - | 987 | ORF629 | Predicted ORF by PRODIGAL Version 1.20 | - |
| orf630 | 657966..658649 | - | 684 | ORF630 | Predicted ORF by PRODIGAL Version 1.20 | - |
| orf631 | 658726..659229 | - | 504 | ORF631 | Predicted ORF by PRODIGAL Version 1.20 | Antitoxin |
| orf632 | 659314..660450 | + | 1137 | ORF632 | Predicted ORF by PRODIGAL Version 1.20 | - |
| orf633 | 660721..661137 | + | 417 | ORF633 | Predicted ORF by PRODIGAL Version 1.20 | - |
| orf634 | 661182..663200 | - | 2019 | ORF634 | Predicted ORF by PRODIGAL Version 1.20 | - |
Domains
The domains were predicted by HMMER and were sorted by score.
Orphan Antitoxin
No domain identified.
Sequences
Orphan Antitoxin
Download Length: Molecular weight: 19455.49 Da Isoelectric Point: 9.6803
>ORF631 Orphan_TA_12 Antitoxin
MSNLTYLQGYPEQLLSQVRTLINEQRLGDVLAKRYPGTHDYATDKALWQYTQDLKNQFLR
NAPPINKVMYDNKIHVLKNALGLHTAVSRVQGGKLKAKAEIRVATVFRNAPEPFLRMIVV
HELAHLKEKEHNKAFYQLCCHMEPQYHQLEFDTRLWLTQLSLGQDKI
MSNLTYLQGYPEQLLSQVRTLINEQRLGDVLAKRYPGTHDYATDKALWQYTQDLKNQFLR
NAPPINKVMYDNKIHVLKNALGLHTAVSRVQGGKLKAKAEIRVATVFRNAPEPFLRMIVV
HELAHLKEKEHNKAFYQLCCHMEPQYHQLEFDTRLWLTQLSLGQDKI
Download Length: 504 bp
>ORF631 Orphan_TA_12 Antitoxin
TCAGATTTTGTCCTGCCCAAGCGACAACTGCGTTAGCCACAGCCGGGTGTCGAACTCAAG
CTGGTGGTACTGCGGCTCCATATGGCAGCACAACTGGTAAAACGCTTTGTTATGCTCTTT
CTCCTTCAGGTGCGCCAGTTCGTGCACCACGATCATACGTAAAAACGGTTCCGGCGCGTT
GCGAAACACAGTAGCGACGCGGATCTCTGCTTTTGCTTTCAGCTTGCCGCCCTGCACACG
AGAAACAGCGGTATGTAACCCGAGCGCGTTTTTTAGCACATGGATCTTATTGTCATACAT
CACTTTATTGATCGGCGGGGCATTGCGCAGAAACTGATTTTTTAGATCCTGAGTATATTG
CCAGAGGGCTTTATCGGTGGCGTAGTCGTGTGTTCCCGGATAGCGTTTTGCCAGCACATC
GCCCAGACGCTGTTCGTTAATCAGCGTTCGCACCTGGGAAAGTAGCTGCTCGGGATAACC
CTGAAGATAAGTAAGATTGCTCAT
TCAGATTTTGTCCTGCCCAAGCGACAACTGCGTTAGCCACAGCCGGGTGTCGAACTCAAG
CTGGTGGTACTGCGGCTCCATATGGCAGCACAACTGGTAAAACGCTTTGTTATGCTCTTT
CTCCTTCAGGTGCGCCAGTTCGTGCACCACGATCATACGTAAAAACGGTTCCGGCGCGTT
GCGAAACACAGTAGCGACGCGGATCTCTGCTTTTGCTTTCAGCTTGCCGCCCTGCACACG
AGAAACAGCGGTATGTAACCCGAGCGCGTTTTTTAGCACATGGATCTTATTGTCATACAT
CACTTTATTGATCGGCGGGGCATTGCGCAGAAACTGATTTTTTAGATCCTGAGTATATTG
CCAGAGGGCTTTATCGGTGGCGTAGTCGTGTGTTCCCGGATAGCGTTTTGCCAGCACATC
GCCCAGACGCTGTTCGTTAATCAGCGTTCGCACCTGGGAAAGTAGCTGCTCGGGATAACC
CTGAAGATAAGTAAGATTGCTCAT
Similar Proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| AT171 | Vibrio cholerae O1 biovar El Tor str. N16961 |
34.884 |
40.952 |
0.09 |