TAfinder detailed results
Overview
| Job ID | wrVbGpMxFf | ||
| Sequence name | NZ_CP026085.1 Escherichia coli strain DH5alpha chromosome, complete genome | ||
| Predicted type | II | ||
Orphan Toxin (Protein)
| Predicted family | vapC (T76) | Predicted domain | PF00126 (HTH_1) |
| Locus tag | orf616 | Length | 298 a.a. |
| Coordinates | 635624..636520 (+) |
Genomic Context
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| orf603 | 631750..633081 | + | 1332 | ORF603 | Predicted ORF by PRODIGAL Version 1.20 | - |
| orf604 | 633109..634419 | + | 1311 | ORF604 | Predicted ORF by PRODIGAL Version 1.20 | - |
| orf605 | 634631..634795 | - | 165 | ORF605 | Predicted ORF by PRODIGAL Version 1.20 | - |
| orf606 | 634818..635519 | - | 702 | ORF606 | Predicted ORF by PRODIGAL Version 1.20 | - |
| orf607 | 635624..636520 | + | 897 | ORF607 | Predicted ORF by PRODIGAL Version 1.20 | Toxin |
| orf608 | 636571..636927 | - | 357 | ORF608 | Predicted ORF by PRODIGAL Version 1.20 | - |
| orf609 | 637169..637534 | - | 366 | ORF609 | Predicted ORF by PRODIGAL Version 1.20 | - |
| orf610 | 637827..638813 | - | 987 | ORF610 | Predicted ORF by PRODIGAL Version 1.20 | - |
| orf611 | 638883..639365 | - | 483 | ORF611 | Predicted ORF by PRODIGAL Version 1.20 | - |
| orf612 | 639461..639760 | - | 300 | ORF612 | Predicted ORF by PRODIGAL Version 1.20 | - |
| orf613 | 639750..640154 | - | 405 | ORF613 | Predicted ORF by PRODIGAL Version 1.20 | - |
| orf614 | 640157..640462 | - | 306 | ORF614 | Predicted ORF by PRODIGAL Version 1.20 | - |
| orf615 | 640500..640868 | - | 369 | ORF615 | Predicted ORF by PRODIGAL Version 1.20 | - |
| orf616 | 641015..641398 | - | 384 | ORF616 | Predicted ORF by PRODIGAL Version 1.20 | - |
Domains
The domains were predicted by HMMER and were sorted by score.
Orphan Toxin
No domain identified.
Sequences
Orphan Toxin
Download Length: Molecular weight: 33229.38 Da Isoelectric Point: 6.3675
>ORF607 Orphan_TA_11 Toxin
MAKERALTLEALRVMDAIDRRGSFAAAADELGRVPSALSYTMQKLEEELDVVLFDRSGHR
TKFTNVGRMLLERGRVLLEAADKLTTDAEALARGWETHLTIVTEALVPTPAFFPLIDKLA
AKANTQLAIITEVLAGAWERLEQGRADIVIAPDMHFRSSSEINSRKLYTLMNVYVAAPDH
PIHQEPEPLSEVTRVKYRGIAVADTARERPVLTVQLLDKQPRLTVSTIEDKRQALLAGLG
VATMPYPMVEKDIAEGRLRVVSPESTSEIDIIMAWRRDSMGEAKSWCLREIPKLFSGK
MAKERALTLEALRVMDAIDRRGSFAAAADELGRVPSALSYTMQKLEEELDVVLFDRSGHR
TKFTNVGRMLLERGRVLLEAADKLTTDAEALARGWETHLTIVTEALVPTPAFFPLIDKLA
AKANTQLAIITEVLAGAWERLEQGRADIVIAPDMHFRSSSEINSRKLYTLMNVYVAAPDH
PIHQEPEPLSEVTRVKYRGIAVADTARERPVLTVQLLDKQPRLTVSTIEDKRQALLAGLG
VATMPYPMVEKDIAEGRLRVVSPESTSEIDIIMAWRRDSMGEAKSWCLREIPKLFSGK
Download Length: 897 bp
>ORF607 Orphan_TA_11 Toxin
ATGGCCAAAGAAAGGGCATTAACGCTGGAAGCACTACGGGTTATGGATGCGATCGATCGC
CGGGGCAGTTTTGCGGCGGCGGCGGATGAGCTGGGACGCGTGCCTTCCGCACTTAGCTAC
ACCATGCAAAAACTGGAAGAAGAGCTGGATGTGGTGCTGTTTGACCGCTCGGGCCATCGC
ACCAAATTCACCAATGTCGGGAGGATGTTGCTGGAGCGAGGGCGCGTTTTGCTGGAAGCC
GCAGATAAACTGACTACCGATGCGGAAGCCCTCGCGCGCGGTTGGGAAACGCATCTCACC
ATTGTGACCGAGGCGCTGGTACCGACACCTGCCTTTTTCCCGTTAATCGACAAACTGGCG
GCAAAAGCCAATACCCAACTGGCAATCATCACCGAAGTGCTGGCGGGGGCGTGGGAACGA
CTGGAGCAGGGGCGGGCGGATATCGTTATCGCGCCGGATATGCATTTTCGTTCCTCGTCG
GAGATCAACTCGCGCAAGCTCTATACCTTAATGAACGTCTACGTTGCCGCGCCTGATCAC
CCGATTCATCAGGAGCCGGAACCGTTATCTGAAGTGACGCGCGTGAAATATCGTGGAATT
GCGGTAGCGGATACCGCTCGTGAGCGCCCGGTGTTGACCGTACAGCTGCTGGACAAACAG
CCGCGCTTAACGGTGAGCACGATTGAAGATAAACGTCAGGCATTACTGGCGGGGCTTGGC
GTGGCGACGATGCCGTATCCGATGGTCGAAAAAGATATTGCGGAAGGGCGGTTGCGTGTC
GTCAGCCCGGAATCGACCAGCGAGATCGATATTATTATGGCCTGGCGTCGTGACAGTATG
GGGGAAGCGAAATCCTGGTGTCTGCGGGAAATTCCCAAACTTTTTAGCGGAAAATAA
ATGGCCAAAGAAAGGGCATTAACGCTGGAAGCACTACGGGTTATGGATGCGATCGATCGC
CGGGGCAGTTTTGCGGCGGCGGCGGATGAGCTGGGACGCGTGCCTTCCGCACTTAGCTAC
ACCATGCAAAAACTGGAAGAAGAGCTGGATGTGGTGCTGTTTGACCGCTCGGGCCATCGC
ACCAAATTCACCAATGTCGGGAGGATGTTGCTGGAGCGAGGGCGCGTTTTGCTGGAAGCC
GCAGATAAACTGACTACCGATGCGGAAGCCCTCGCGCGCGGTTGGGAAACGCATCTCACC
ATTGTGACCGAGGCGCTGGTACCGACACCTGCCTTTTTCCCGTTAATCGACAAACTGGCG
GCAAAAGCCAATACCCAACTGGCAATCATCACCGAAGTGCTGGCGGGGGCGTGGGAACGA
CTGGAGCAGGGGCGGGCGGATATCGTTATCGCGCCGGATATGCATTTTCGTTCCTCGTCG
GAGATCAACTCGCGCAAGCTCTATACCTTAATGAACGTCTACGTTGCCGCGCCTGATCAC
CCGATTCATCAGGAGCCGGAACCGTTATCTGAAGTGACGCGCGTGAAATATCGTGGAATT
GCGGTAGCGGATACCGCTCGTGAGCGCCCGGTGTTGACCGTACAGCTGCTGGACAAACAG
CCGCGCTTAACGGTGAGCACGATTGAAGATAAACGTCAGGCATTACTGGCGGGGCTTGGC
GTGGCGACGATGCCGTATCCGATGGTCGAAAAAGATATTGCGGAAGGGCGGTTGCGTGTC
GTCAGCCCGGAATCGACCAGCGAGATCGATATTATTATGGCCTGGCGTCGTGACAGTATG
GGGGAAGCGAAATCCTGGTGTCTGCGGGAAATTCCCAAACTTTTTAGCGGAAAATAA
Similar Proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| T76 | Mycobacterium tuberculosis H37Rv |
35.417 |
35.556 |
0.057 |