TAfinder detailed results
Overview
| Job ID | wrVbGpMxFf | ||
| Sequence name | NZ_CP026085.1 Escherichia coli strain DH5alpha chromosome, complete genome | ||
| Predicted type | II | ||
Orphan Antitoxin (Protein)
| Predicted family | relB (AT10123) | Predicted domain | - |
| Locus tag | orf4099 | Length | 239 a.a. |
| Coordinates | 4368818..4369537 (+) |
Genomic Context
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| orf4090 | 4364135..4365652 | + | 1518 | ORF4090 | Predicted ORF by PRODIGAL Version 1.20 | - |
| orf4091 | 4365771..4365944 | - | 174 | ORF4091 | Predicted ORF by PRODIGAL Version 1.20 | - |
| orf4092 | 4365972..4366268 | - | 297 | ORF4092 | Predicted ORF by PRODIGAL Version 1.20 | - |
| orf4093 | 4366495..4366767 | - | 273 | ORF4093 | Predicted ORF by PRODIGAL Version 1.20 | - |
| orf4094 | 4366779..4367009 | - | 231 | ORF4094 | Predicted ORF by PRODIGAL Version 1.20 | - |
| orf4095 | 4367190..4368821 | + | 1632 | ORF4095 | Predicted ORF by PRODIGAL Version 1.20 | - |
| orf4096 | 4368818..4369537 | + | 720 | ORF4096 | Predicted ORF by PRODIGAL Version 1.20 | Antitoxin |
| orf4097 | 4370108..4371448 | + | 1341 | ORF4097 | Predicted ORF by PRODIGAL Version 1.20 | - |
| orf4098 | 4371526..4373172 | + | 1647 | ORF4098 | Predicted ORF by PRODIGAL Version 1.20 | - |
| orf4099 | 4373295..4373924 | + | 630 | ORF4099 | Predicted ORF by PRODIGAL Version 1.20 | - |
Domains
The domains were predicted by HMMER and were sorted by score.
Orphan Antitoxin
No domain identified.
Sequences
Orphan Antitoxin
Download Length: Molecular weight: 27488.43 Da Isoelectric Point: 6.2899
>ORF4096 Orphan_TA_101 Antitoxin
MINVLIIDDDAMVAELNRRYVAQIPGFQCCGTASTLEKAKEIIFNSDTPIDLILLDIYMQ
KENGLDLLPVLHNARCKSDVIVISSAADAATIKDSLHYGVVDYLIKPFQASRFEEALTGW
RQKKMALEKHQYYDQAELDQLIHGSSSNEQDPRRLPKGLTPQTLRTLCQWIDAHQDYEFS
TDELANEVNISRVSCRKYLIWLVNCHILFTSIHYGVTGRPVYRYRIQAEHYSLLKQYCQ
MINVLIIDDDAMVAELNRRYVAQIPGFQCCGTASTLEKAKEIIFNSDTPIDLILLDIYMQ
KENGLDLLPVLHNARCKSDVIVISSAADAATIKDSLHYGVVDYLIKPFQASRFEEALTGW
RQKKMALEKHQYYDQAELDQLIHGSSSNEQDPRRLPKGLTPQTLRTLCQWIDAHQDYEFS
TDELANEVNISRVSCRKYLIWLVNCHILFTSIHYGVTGRPVYRYRIQAEHYSLLKQYCQ
Download Length: 720 bp
>ORF4096 Orphan_TA_101 Antitoxin
ATGATCAATGTATTAATTATCGATGACGACGCAATGGTCGCGGAGCTGAATCGCCGATAC
GTAGCACAAATCCCAGGCTTTCAATGCTGTGGAACAGCCTCGACGCTGGAGAAAGCCAAA
GAGATTATCTTCAATAGCGATACGCCTATCGACCTGATATTGCTCGATATCTATATGCAA
AAAGAGAACGGGCTCGATTTACTGCCTGTCCTGCATAACGCGCGTTGCAAAAGTGATGTG
ATTGTCATCTCCTCCGCAGCCGATGCGGCAACCATTAAAGATTCGCTGCATTACGGTGTC
GTGGATTACCTGATCAAACCCTTCCAGGCTTCCCGCTTTGAAGAGGCGCTCACCGGCTGG
CGGCAAAAGAAAATGGCGCTGGAAAAACATCAGTATTATGACCAGGCCGAGCTTGATCAG
CTAATCCACGGCAGCAGCTCCAACGAACAGGATCCTCGTCGCTTGCCAAAAGGCTTAACG
CCGCAGACGTTACGCACGCTGTGCCAGTGGATTGACGCGCATCAGGACTATGAGTTTTCA
ACCGACGAGCTGGCTAACGAGGTTAACATCTCGCGTGTTTCCTGCCGTAAATACCTCATC
TGGCTGGTCAACTGCCACATCTTGTTCACCAGTATCCATTATGGCGTCACGGGGCGTCCG
GTTTACCGTTACCGTATTCAGGCAGAACACTACTCACTACTGAAACAATATTGCCAATAA
ATGATCAATGTATTAATTATCGATGACGACGCAATGGTCGCGGAGCTGAATCGCCGATAC
GTAGCACAAATCCCAGGCTTTCAATGCTGTGGAACAGCCTCGACGCTGGAGAAAGCCAAA
GAGATTATCTTCAATAGCGATACGCCTATCGACCTGATATTGCTCGATATCTATATGCAA
AAAGAGAACGGGCTCGATTTACTGCCTGTCCTGCATAACGCGCGTTGCAAAAGTGATGTG
ATTGTCATCTCCTCCGCAGCCGATGCGGCAACCATTAAAGATTCGCTGCATTACGGTGTC
GTGGATTACCTGATCAAACCCTTCCAGGCTTCCCGCTTTGAAGAGGCGCTCACCGGCTGG
CGGCAAAAGAAAATGGCGCTGGAAAAACATCAGTATTATGACCAGGCCGAGCTTGATCAG
CTAATCCACGGCAGCAGCTCCAACGAACAGGATCCTCGTCGCTTGCCAAAAGGCTTAACG
CCGCAGACGTTACGCACGCTGTGCCAGTGGATTGACGCGCATCAGGACTATGAGTTTTCA
ACCGACGAGCTGGCTAACGAGGTTAACATCTCGCGTGTTTCCTGCCGTAAATACCTCATC
TGGCTGGTCAACTGCCACATCTTGTTCACCAGTATCCATTATGGCGTCACGGGGCGTCCG
GTTTACCGTTACCGTATTCAGGCAGAACACTACTCACTACTGAAACAATATTGCCAATAA
Similar Proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| AT10123 | Paracoccus phage vB_PkoS_Pkon1 |
42.857 |
24.779 |
0.05 |