MGE detailed information
MGE type: Conjugative plasmid MGE length: 123938 bp
Accession: NZ_OX637965 Location: 1..123938 Organism: Escherichia coli O25b:H4-ST131 isolate 46 Replicon: plasmid P1
Accession: NZ_OX637965 Location: 1..123938 Organism: Escherichia coli O25b:H4-ST131 isolate 46 Replicon: plasmid P1
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| QQG90_RS25700 (1) | 1..978 | + | 978 | WP_250664240.1 | RepB family plasmid replication initiator protein | - |
| QQG90_RS25705 (1263) | 1263..2003 | - | 741 | WP_033550837.1 | tyrosine-type recombinase/integrase | - |
| QQG90_RS25710 (2124) | 2124..2312 | - | 189 | WP_001309252.1 | hypothetical protein | - |
| QQG90_RS25715 (2679) | 2679..3848 | + | 1170 | WP_001072358.1 | hypothetical protein | - |
| QQG90_RS25720 (4074) | 4074..4249 | - | 176 | Protein_4 | IS3 family transposase | - |
| QQG90_RS25725 (4695) | 4695..4967 | - | 273 | WP_001322642.1 | Major pilu subunit operon regulatory protein PapB | VF |
| QQG90_RS25730 (5528) | 5528..6232 | + | 705 | WP_001067858.1 | IS6 family transposase IS15DI | Transposase |
| QQG90_RS25735 (6285) | 6285..6560 | - | 276 | Protein_7 | Tn3 family transposase TnpR_Tn5403 | Transposase |
| QQG90_RS25740 (6655) | 6655..7605 | + | 951 | Protein_8 | Tn3 family transposase TnpA_Tn5403 | Transposase |
| QQG90_RS25745 (7669) | 7669..8373 | + | 705 | WP_001067858.1 | IS6 family transposase IS15DI | Transposase |
| QQG90_RS25750 (8511) | 8511..8681 | + | 171 | Protein_10 | DsbA family protein | - |
| QQG90_RS25755 (8671) | 8671..9177 | + | 507 | WP_000949452.1 | protein disulfide oxidoreductase | - |
| QQG90_RS25760 (9360) | 9360..10175 | + | 816 | WP_012372823.1 | Na(+)-translocating NADH-quinone reductase subunit C | - |
| QQG90_RS25765 (10522) | 10522..12408 | + | 1887 | WP_000118029.1 | FTR1 family protein | - |
| QQG90_RS25770 (12449) | 12449..12976 | + | 528 | WP_000178050.1 | iron transporter | - |
| QQG90_RS25775 (13080) | 13080..14459 | + | 1380 | WP_000119836.1 | Fe-S-containing protein | - |
| QQG90_RS25780 (14462) | 14462..15745 | + | 1284 | WP_000964653.1 | ABC transporter permease | - |
| QQG90_RS25785 (15735) | 15735..16865 | + | 1131 | WP_000729218.1 | ABC transporter permease | - |
| QQG90_RS25790 (16870) | 16870..17565 | + | 696 | WP_000117262.1 | Lipoprotein-releasing system ATP-binding protein LolD | VF |
| QQG90_RS25795 (17552) | 17552..18037 | + | 486 | WP_001267176.1 | TlpA disulfide reductase family protein | - |
| QQG90_RS25800 (18062) | 18062..18547 | + | 486 | WP_000874189.1 | hypothetical protein | - |
| QQG90_RS25805 (18669) | 18669..19302 | + | 634 | Protein_21 | histidine-type phosphatase | - |
| QQG90_RS25810 (19452) | 19452..19625 | - | 174 | Protein_22 | IS5 family transposase ISKpn26 | Transposase |
| QQG90_RS25815 (19626) | 19626..19940 | - | 315 | Protein_23 | IS5 family transposase ISKpn26 | Transposase |
| QQG90_RS25820 (20613) | 20613..21352 | - | 740 | Protein_24 | IS3 family transposase IS629 | Transposase |
| QQG90_RS25825 (21454) | 21454..21714 | + | 261 | WP_000371882.1 | hypothetical protein | - |
| QQG90_RS25830 (21711) | 21711..22220 | + | 510 | WP_000194542.1 | hypothetical protein | - |
| QQG90_RS25835 (22240) | 22240..22587 | - | 348 | WP_000142452.1 | DUF6404 family protein | - |
| QQG90_RS25840 (22716) | 22716..23051 | + | 336 | WP_001080732.1 | colicin E1 family microcin immunity protein | - |
| QQG90_RS25845 (24503) | 24503..25128 | + | 626 | Protein_29 | replication initiation protein | - |
| QQG90_RS25850 (25502) | 25502..26377 | + | 876 | WP_001224623.1 | ChaN family lipoprotein | - |
| QQG90_RS25855 (26385) | 26385..27161 | + | 777 | WP_000981091.1 | energy transducer TonB | - |
| QQG90_RS25860 (27330) | 27330..29591 | + | 2262 | WP_001100763.1 | TonB-dependent receptor | - |
| QQG90_RS25865 (29660) | 29660..30835 | + | 1176 | WP_001020413.1 | putative protein YncE | VF |
| QQG90_RS25870 (31358) | 31358..31663 | - | 306 | Protein_34 | IS91 family transposase ISSbo1 | Transposase |
| QQG90_RS25875 (31689) | 31689..32428 | + | 740 | Protein_35 | IS3 family transposase IS629 | Transposase |
| QQG90_RS25880 (33037) | 33037..33741 | - | 705 | WP_001067858.1 | IS6 family transposase IS15DI | Transposase |
| QQG90_RS25885 (33806) | 33806..34351 | - | 546 | Protein_37 | IS91 family transposase ISAzo26 | Transposase |
| QQG90_RS25890 (34509) | 34509..34982 | + | 474 | WP_001389366.1 | Dihydrofolate reductase type 1 | ARG |
| QQG90_RS25895 (35113) | 35113..35901 | + | 789 | WP_000503573.1 | Streptomycin 3''-adenylyltransferase | ARG |
| QQG90_RS25900 (36107) | 36107..36454 | + | 348 | WP_000679427.1 | Multidrug transporter EmrE | ARG |
| QQG90_RS25905 (36448) | 36448..37287 | + | 840 | WP_000259031.1 | Dihydropteroate synthase | ARG |
| QQG90_RS25910 (37415) | 37415..37618 | + | 204 | WP_000376616.1 | hypothetical protein | - |
| QQG90_RS25915 (37774) | 37774..38364 | + | 591 | Protein_43 | chromate transporter | - |
| QQG90_RS25920 (38428) | 38428..39132 | + | 705 | WP_001067858.1 | IS6 family transposase IS15DI | Transposase |
| QQG90_RS25925 (39187) | 39187..41139 | + | 1953 | Protein_45 | Tn3 family transposase TnpA_Tn5403 | Transposase |
| QQG90_RS25930 (41276) | 41276..41677 | - | 402 | WP_001398199.1 | type II toxin-antitoxin system toxin endoribonuclease PemK | - |
| QQG90_RS25935 (41610) | 41610..41867 | - | 258 | WP_000557619.1 | type II toxin-antitoxin system antitoxin PemI | - |
| QQG90_RS25940 (41960) | 41960..42613 | - | 654 | WP_000616807.1 | CPBP family intramembrane metalloprotease | - |
| QQG90_RS25945 (43553) | 43553..44410 | - | 858 | WP_000130640.1 | incFII family plasmid replication initiator RepA | - |
| QQG90_RS25950 (44403) | 44403..44477 | - | 75 | WP_031943482.1 | RepA leader peptide Tap | - |
| QQG90_RS25955 (44714) | 44714..44929 | - | 216 | Protein_51 | replication regulatory protein RepA | - |
| QQG90_RS25960 (45120) | 45120..46661 | + | 1542 | WP_002431311.1 | IS21 family transposase ISEc12 | Transposase |
| QQG90_RS25965 (46676) | 46676..47422 | + | 747 | WP_001016257.1 | IS21 family transposase ISEc12 | Transposase |
| QQG90_RS25970 (47851) | 47851..47985 | - | 135 | WP_023144756.1 | Hok/Gef family protein | Toxin Detail |
| - (48030) | 48030..48090 | + | 61 | NuclAT_2 | - | Antitoxin Detail |
| - (48030) | 48030..48090 | + | 61 | NuclAT_2 | - | Antitoxin Detail |
| - (48030) | 48030..48090 | + | 61 | NuclAT_2 | - | Antitoxin Detail |
| - (48030) | 48030..48090 | + | 61 | NuclAT_2 | - | Antitoxin Detail |
| QQG90_RS25975 (48057) | 48057..48343 | - | 287 | Protein_55 | DUF2726 domain-containing protein | - |
| QQG90_RS25980 (48856) | 48856..49068 | - | 213 | WP_013023861.1 | hypothetical protein | - |
| QQG90_RS25985 (49199) | 49199..49759 | - | 561 | WP_000139341.1 | fertility inhibition protein FinO | - |
| QQG90_RS25990 (49814) | 49814..50560 | - | 747 | WP_000205718.1 | conjugal transfer pilus acetylase TraX | - |
| QQG90_RS25995 (50580) | 50580..55850 | - | 5271 | WP_042045338.1 | Multifunctional conjugation protein TraI | Relaxase |
| QQG90_RS26000 (55850) | 55850..58039 | - | 2190 | WP_024946705.1 | type IV conjugative transfer system coupling protein TraD | - |
| QQG90_RS26005 (58036) | 58036..58815 | - | 780 | WP_000199914.1 | hypothetical protein | - |
| QQG90_RS26010 (59018) | 59018..59749 | - | 732 | WP_000850429.1 | conjugal transfer complement resistance protein TraT | - |
| QQG90_RS26015 (59781) | 59781..60278 | - | 498 | WP_000605862.1 | entry exclusion protein | - |
| QQG90_RS26020 (60297) | 60297..63116 | - | 2820 | WP_001007062.1 | conjugal transfer mating-pair stabilization protein TraG | - |
| QQG90_RS26025 (63113) | 63113..64486 | - | 1374 | WP_000944328.1 | conjugal transfer pilus assembly protein TraH | - |
| QQG90_RS26030 (64473) | 64473..64865 | - | 393 | WP_000659962.1 | F-type conjugal transfer protein TrbF | - |
| QQG90_RS26035 (64846) | 64846..65193 | - | 348 | WP_071571857.1 | P-type conjugative transfer protein TrbJ | - |
| QQG90_RS26040 (65123) | 65123..65668 | - | 546 | WP_000059829.1 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
| QQG90_RS26045 (65655) | 65655..65939 | - | 285 | WP_001617873.1 | type-F conjugative transfer system pilin chaperone TraQ | - |
| QQG90_RS26050 (66066) | 66066..66386 | - | 321 | WP_001348757.1 | conjugal transfer protein TrbA | - |
| QQG90_RS26060 (67286) | 67286..68266 | - | 981 | WP_000019450.1 | IS5 family transposase ISKpn26 | Transposase |
| QQG90_RS26065 (68396) | 68396..69139 | - | 744 | WP_001030401.1 | type-F conjugative transfer system pilin assembly protein TraF | - |
| QQG90_RS26070 (69132) | 69132..69389 | - | 258 | WP_000864347.1 | conjugal transfer protein TrbE | - |
| QQG90_RS26075 (69416) | 69416..71266 | - | 1851 | WP_000821866.1 | type-F conjugative transfer system mating-pair stabilization protein TraN | - |
| QQG90_RS26080 (71263) | 71263..71901 | - | 639 | WP_001080259.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| QQG90_RS26085 (71910) | 71910..72215 | - | 306 | WP_000224413.1 | hypothetical protein | - |
| QQG90_RS26090 (72311) | 72311..72736 | + | 426 | WP_000422741.1 | IS66 family transposase ISEc23 | Transposase |
| QQG90_RS26095 (72733) | 72733..73083 | + | 351 | WP_000624722.1 | IS66 family transposase ISEc23 | Transposase |
| QQG90_RS26100 (73114) | 73114..74727 | + | 1614 | WP_000080200.1 | IS66 family transposase ISEc23 | Transposase |
| QQG90_RS26105 (74785) | 74785..75777 | - | 993 | WP_000830190.1 | conjugal transfer pilus assembly protein TraU | - |
| QQG90_RS26110 (75774) | 75774..76406 | - | 633 | WP_001203727.1 | type-F conjugative transfer system protein TraW | - |
| QQG90_RS26115 (76403) | 76403..76789 | - | 387 | WP_000214084.1 | type-F conjugative transfer system protein TrbI | - |
| QQG90_RS26120 (76786) | 76786..79413 | - | 2628 | WP_001064258.1 | type IV secretion system protein TraC | - |
| QQG90_RS26125 (79573) | 79573..79794 | - | 222 | WP_001278694.1 | conjugal transfer protein TraR | - |
| QQG90_RS26130 (79929) | 79929..80444 | - | 516 | WP_000809886.1 | type IV conjugative transfer system lipoprotein TraV | - |
| QQG90_RS26135 (80444) | 80444..80755 | - | 312 | WP_001057272.1 | conjugal transfer protein TrbD | - |
| QQG90_RS26140 (80742) | 80742..81308 | - | 567 | WP_000896601.1 | conjugal transfer pilus-stabilizing protein TraP | - |
| QQG90_RS26145 (81298) | 81298..82749 | - | 1452 | WP_000146687.1 | F-type conjugal transfer pilus assembly protein TraB | - |
| QQG90_RS26150 (82749) | 82749..83477 | - | 729 | WP_001230808.1 | type-F conjugative transfer system secretin TraK | - |
| QQG90_RS26155 (83464) | 83464..84030 | - | 567 | WP_000399791.1 | type IV conjugative transfer system protein TraE | - |
| QQG90_RS26160 (84052) | 84052..84363 | - | 312 | WP_000012107.1 | type IV conjugative transfer system protein TraL | - |
| QQG90_RS26165 (84378) | 84378..84737 | - | 360 | WP_024210418.1 | type IV conjugative transfer system pilin TraA | - |
| QQG90_RS26170 (84771) | 84771..84998 | - | 228 | WP_001254388.1 | conjugal transfer relaxosome protein TraY | - |
| QQG90_RS26175 (85086) | 85086..85763 | - | 678 | WP_123371434.1 | PAS domain-containing protein | - |
| QQG90_RS26180 (85897) | 85897..86280 | - | 384 | WP_001151566.1 | conjugal transfer relaxosome DNA-binding protein TraM | - |
| QQG90_RS26185 (86622) | 86622..87212 | + | 591 | WP_001376243.1 | hypothetical protein | VF |
| QQG90_RS26190 (87509) | 87509..88330 | - | 822 | WP_001234469.1 | DUF932 domain-containing protein | - |
| QQG90_RS26195 (88449) | 88449..88736 | - | 288 | WP_000107535.1 | hypothetical protein | - |
| QQG90_RS26200 (88761) | 88761..88967 | - | 207 | WP_000275859.1 | hypothetical protein | - |
| QQG90_RS26205 (89037) | 89037..89210 | + | 174 | Protein_101 | hypothetical protein | - |
| QQG90_RS26210 (89208) | 89208..89438 | - | 231 | WP_001426396.1 | hypothetical protein | - |
| QQG90_RS26215 (89658) | 89658..89783 | - | 126 | WP_001372321.1 | type I toxin-antitoxin system Hok family toxin | Toxin Detail |
| QQG90_RS26220 (89725) | 89725..89874 | - | 150 | Protein_104 | plasmid maintenance protein Mok | - |
| - (89860) | 89860..89987 | - | 128 | NuclAT_0 | - | Antitoxin Detail |
| - (89860) | 89860..89987 | - | 128 | NuclAT_0 | - | Antitoxin Detail |
| - (89860) | 89860..89987 | - | 128 | NuclAT_0 | - | Antitoxin Detail |
| - (89860) | 89860..89987 | - | 128 | NuclAT_0 | - | Antitoxin Detail |
| - (91429) | 91429..91531 | - | 103 | NuclAT_1 | - | - |
| - (91429) | 91429..91531 | - | 103 | NuclAT_1 | - | - |
| - (91429) | 91429..91531 | - | 103 | NuclAT_1 | - | - |
| - (91429) | 91429..91531 | - | 103 | NuclAT_1 | - | - |
| QQG90_RS26230 (91500) | 91500..92262 | - | 763 | Protein_106 | plasmid SOS inhibition protein A | - |
| QQG90_RS26235 (92259) | 92259..92693 | - | 435 | WP_000845949.1 | conjugation system SOS inhibitor PsiB | - |
| QQG90_RS26240 (92748) | 92748..94706 | - | 1959 | WP_042045562.1 | ParB/RepB/Spo0J family partition protein | - |
| QQG90_RS26245 (94772) | 94772..95005 | - | 234 | WP_000005990.1 | DUF905 family protein | - |
| QQG90_RS26250 (95068) | 95068..95565 | - | 498 | WP_042045560.1 | single-stranded DNA-binding protein | - |
| QQG90_RS26255 (95715) | 95715..97616 | - | 1902 | WP_000936285.1 | group II intron reverse transcriptase/maturase | - |
| QQG90_RS26260 (98294) | 98294..98500 | - | 207 | WP_000547975.1 | hypothetical protein | - |
| QQG90_RS26265 (98741) | 98741..99010 | - | 270 | WP_071977877.1 | hypothetical protein | - |
| QQG90_RS26270 (98911) | 98911..99135 | - | 225 | WP_016238251.1 | hypothetical protein | - |
| QQG90_RS26275 (99161) | 99161..99724 | - | 564 | WP_123371481.1 | class I SAM-dependent methyltransferase | - |
| QQG90_RS26280 (99772) | 99772..101133 | - | 1362 | WP_000170714.1 | DUF3560 domain-containing protein | - |
| QQG90_RS26285 (101185) | 101185..101415 | - | 231 | WP_000218642.1 | hypothetical protein | - |
| QQG90_RS26290 (102450) | 102450..102641 | - | 192 | WP_001027516.1 | hypothetical protein | - |
| QQG90_RS26295 (102638) | 102638..103060 | - | 423 | WP_000271753.1 | DUF1380 family protein | - |
| QQG90_RS26300 (103107) | 103107..103532 | - | 426 | WP_001198928.1 | antirestriction protein | - |
| QQG90_RS26305 (104109) | 104109..105221 | - | 1113 | WP_001300563.1 | IS4 family transposase IS421 | Transposase |
| QQG90_RS26310 (105298) | 105298..106074 | - | 777 | WP_001753849.1 | hypothetical protein | - |
| QQG90_RS26315 (106125) | 106125..106643 | - | 519 | WP_123325260.1 | DUF1380 family protein | - |
| QQG90_RS26320 (106573) | 106573..106794 | - | 222 | WP_001104873.1 | hypothetical protein | - |
| QQG90_RS26325 (106795) | 106795..107478 | - | 684 | WP_000086185.1 | DNA methylase | - |
| QQG90_RS26330 (107555) | 107555..107866 | - | 312 | WP_042045883.1 | hypothetical protein | - |
| QQG90_RS26335 (107863) | 107863..108765 | - | 903 | WP_077727434.1 | DUF1281 domain-containing protein | - |
| QQG90_RS26340 (109632) | 109632..110603 | - | 972 | WP_000817036.1 | ParB/RepB/Spo0J family plasmid partition protein | - |
| QQG90_RS26345 (110603) | 110603..111769 | - | 1167 | WP_000772446.1 | hypothetical protein | VF |
| QQG90_RS26350 (112357) | 112357..113112 | - | 756 | WP_000852146.1 | replication initiation protein RepE | - |
| QQG90_RS26355 (113886) | 113886..114692 | - | 807 | WP_000016982.1 | site-specific integrase | - |
| QQG90_RS26360 (114693) | 114693..114998 | - | 306 | WP_001159868.1 | type II toxin-antitoxin system toxin CcdB | Toxin Detail |
| QQG90_RS26365 (115000) | 115000..115218 | - | 219 | WP_000813634.1 | type II toxin-antitoxin system antitoxin CcdA | Antitoxin Detail |
| QQG90_RS26370 (115798) | 115798..116886 | + | 1089 | WP_000952217.1 | transcriptional repressor PifC | - |
| QQG90_RS26375 (116888) | 116888..119113 | + | 2226 | WP_000698737.1 | P-loop NTPase fold protein | - |
| QQG90_RS26380 (119163) | 119163..120062 | - | 900 | WP_000963206.1 | nucleotide-binding protein | - |
| QQG90_RS26385 (120052) | 120052..120342 | - | 291 | WP_000538310.1 | hypothetical protein | - |
| QQG90_RS26390 (122458) | 122458..123099 | + | 642 | WP_033550835.1 | hypothetical protein | - |
| QQG90_RS26395 (123872) | 123872..123938 | - | 67 | Protein_139 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|