MGE detailed information
MGE type: Conjugative plasmid MGE length: 108855 bp
Accession: NZ_OX461106 Location: 1..108855 Organism: Serratia proteamaculans strain EBP3064 isolate EBP3064 Replicon: plasmid EBP3064_p1
Accession: NZ_OX461106 Location: 1..108855 Organism: Serratia proteamaculans strain EBP3064 isolate EBP3064 Replicon: plasmid EBP3064_p1
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| QOT07_RS25160 | 1..918 | + | 918 | WP_283604454.1 | plasmid replication initiator RepA | - |
| QOT07_RS25165 | 1491..1733 | + | 243 | WP_000124732.1 | type II toxin-antitoxin system ParD family antitoxin | - |
| QOT07_RS25170 | 1726..2010 | + | 285 | WP_283604457.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| QOT07_RS25175 | 2073..3017 | - | 945 | WP_283604541.1 | reverse transcriptase family protein | - |
| QOT07_RS25180 | 2983..3300 | - | 318 | WP_064645508.1 | helix-turn-helix transcriptional regulator | - |
| QOT07_RS25185 | 3333..3491 | - | 159 | WP_211271130.1 | hypothetical protein | - |
| QOT07_RS25190 | 4030..4278 | + | 249 | WP_041691825.1 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | Antitoxin Detail |
| QOT07_RS25195 | 4279..4611 | + | 333 | WP_283604460.1 | endoribonuclease MazF | Toxin Detail |
| QOT07_RS25200 | 4653..4898 | + | 246 | WP_283604462.1 | hypothetical protein | - |
| QOT07_RS25205 | 5082..5309 | - | 228 | WP_283604464.1 | plasmid partition protein ParG | - |
| QOT07_RS25210 | 5349..5969 | - | 621 | WP_283604466.1 | ParA family partition ATPase | - |
| QOT07_RS25215 | 6123..6260 | - | 138 | WP_224718488.1 | hypothetical protein | - |
| QOT07_RS25220 | 6312..6917 | - | 606 | WP_000509966.1 | Tn3 family transposase TnpR_Tn5403 | Transposase |
| QOT07_RS25225 | 7012..9909 | + | 2898 | WP_129941809.1 | Tn3 family transposase TnpA_Tn5403 | Transposase |
| QOT07_RS25230 | 10360..11622 | - | 1263 | WP_130016804.1 | translesion error-prone DNA polymerase V subunit UmuC | - |
| QOT07_RS25235 | 11625..12041 | - | 417 | WP_130016803.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| QOT07_RS25240 | 12237..12923 | - | 687 | WP_283604542.1 | SOS response-associated peptidase family protein | - |
| QOT07_RS25245 | 13122..13985 | - | 864 | WP_129935308.1 | hypothetical protein | - |
| QOT07_RS25250 | 14005..14961 | - | 957 | WP_129935310.1 | hypothetical protein | - |
| QOT07_RS25255 | 14958..15209 | - | 252 | WP_006322729.1 | hypothetical protein | - |
| QOT07_RS25260 | 15582..17297 | + | 1716 | WP_242503221.1 | colicin-like pore-forming protein | - |
| QOT07_RS25265 | 17314..17652 | - | 339 | WP_130016801.1 | colicin E1 family microcin immunity protein | - |
| QOT07_RS25270 | 17720..18079 | - | 360 | WP_165366317.1 | TonB family protein | - |
| QOT07_RS25275 | 18531..18704 | - | 174 | WP_261159723.1 | hypothetical protein | - |
| QOT07_RS25280 | 18972..20021 | - | 1050 | WP_207213988.1 | Abi family protein | - |
| QOT07_RS25285 | 20174..21043 | - | 870 | WP_130016798.1 | hypothetical protein | - |
| QOT07_RS25290 | 21907..22587 | + | 681 | WP_130016796.1 | hypothetical protein | - |
| QOT07_RS25295 | 22584..23369 | + | 786 | WP_261159727.1 | IS91 family transposase ISSod25 | Transposase |
| QOT07_RS25300 | 23410..24135 | + | 726 | WP_207213989.1 | hypothetical protein | - |
| QOT07_RS25305 | 24282..24983 | - | 702 | WP_130016795.1 | DNA-binding protein | - |
| QOT07_RS25310 | 24983..25123 | - | 141 | WP_165366318.1 | hypothetical protein | - |
| QOT07_RS25315 | 25897..26145 | + | 249 | WP_130016794.1 | helix-turn-helix transcriptional regulator | - |
| QOT07_RS25320 | 26262..26690 | - | 429 | WP_130016793.1 | plasmid protein | - |
| QOT07_RS25325 | 26774..27046 | - | 273 | WP_127146980.1 | CopG family transcriptional regulator | - |
| QOT07_RS25330 | 27105..27749 | - | 645 | WP_129935326.1 | Chromosome-partitioning ATPase Soj | VF |
| QOT07_RS25335 | 28111..28881 | + | 771 | WP_130016792.1 | N-6 DNA methylase | - |
| QOT07_RS25340 | 29343..29846 | + | 504 | WP_130016790.1 | hypothetical protein | - |
| QOT07_RS25345 | 29892..30233 | + | 342 | WP_165366319.1 | DUF3085 domain-containing protein | - |
| QOT07_RS25350 | 30490..31464 | + | 975 | WP_130016788.1 | plasmid segregation protein ParM | - |
| QOT07_RS25355 | 31467..31871 | + | 405 | WP_129935331.1 | plasmid partitioning/stability family protein | - |
| QOT07_RS25360 | 31956..32513 | + | 558 | WP_130016787.1 | helix-turn-helix transcriptional regulator | - |
| QOT07_RS25365 | 32937..33344 | + | 408 | WP_165366320.1 | hypothetical protein | - |
| QOT07_RS25370 | 33398..33634 | + | 237 | WP_130016784.1 | hypothetical protein | - |
| QOT07_RS25375 | 33961..34467 | + | 507 | WP_130016783.1 | antirestriction protein | - |
| QOT07_RS25380 | 35150..37186 | + | 2037 | WP_130016782.1 | ParB/RepB/Spo0J family partition protein | - |
| QOT07_RS25385 | 37227..37691 | + | 465 | WP_130016781.1 | conjugation system SOS inhibitor PsiB | - |
| QOT07_RS25390 | 37688..38416 | + | 729 | WP_130016780.1 | plasmid SOS inhibition protein A | - |
| QOT07_RS25395 | 38531..38842 | + | 312 | WP_017891116.1 | type II toxin-antitoxin system HigB family toxin | Toxin Detail |
| QOT07_RS25400 | 38839..39282 | + | 444 | WP_127147056.1 | helix-turn-helix domain-containing protein | Antitoxin Detail |
| QOT07_RS25405 | 39846..40298 | + | 453 | WP_129935340.1 | hypothetical protein | - |
| QOT07_RS25410 | 40359..40508 | + | 150 | WP_165366321.1 | hypothetical protein | - |
| QOT07_RS25415 | 40955..41773 | + | 819 | WP_130016779.1 | DUF932 domain-containing protein | - |
| QOT07_RS25420 | 42262..42603 | - | 342 | WP_242503224.1 | mobilization protein MobC | - |
| QOT07_RS25425 | 42872..43177 | + | 306 | WP_130016778.1 | plasmid mobilization protein MobA | - |
| QOT07_RS25430 | 43188..45143 | + | 1956 | WP_130016777.1 | Protein TraI | Relaxase |
| QOT07_RS25435 | 45333..46481 | + | 1149 | WP_283604497.1 | IS30 family transposase ISCfr4 | Transposase |
| QOT07_RS25440 | 46748..47101 | + | 354 | WP_001114073.1 | As(III)-sensing metalloregulatory transcriptional repressor ArsR | - |
| QOT07_RS25445 | 47149..47511 | + | 363 | WP_000783215.1 | arsenite efflux transporter metallochaperone ArsD | - |
| QOT07_RS25450 | 47529..49280 | + | 1752 | WP_001556710.1 | arsenite efflux transporter ATPase subunit ArsA | - |
| QOT07_RS25455 | 49329..50618 | + | 1290 | WP_000922630.1 | arsenite efflux transporter membrane subunit ArsB | - |
| QOT07_RS25460 | 50631..51056 | + | 426 | WP_000065758.1 | glutaredoxin-dependent arsenate reductase | - |
| QOT07_RS25465 | 51087..51461 | - | 375 | WP_000110555.1 | ArsA-related P-loop ATPase | - |
| QOT07_RS25470 | 51500..52072 | - | 573 | WP_001556711.1 | Tn3 family transposase TnpR_Tn3 | Transposase |
| QOT07_RS25475 | 52236..55244 | + | 3009 | WP_012817690.1 | Tn3 family transposase ISEc63 | Transposase |
| QOT07_RS25480 | 55269..55403 | - | 135 | WP_283604502.1 | hypothetical protein | - |
| QOT07_RS25485 | 55495..56463 | - | 969 | WP_032640602.1 | magnesium and cobalt transport protein CorA | - |
| QOT07_RS25490 | 56500..57057 | - | 558 | WP_003100847.1 | Tn3 family transposase TnpR_ISPa38 | Transposase |
| QOT07_RS25495 | 57051..57422 | - | 372 | WP_003100853.1 | hypothetical protein | - |
| QOT07_RS25500 | 57419..57919 | - | 501 | WP_003100856.1 | hypothetical protein | - |
| QOT07_RS25505 | 57916..58242 | - | 327 | WP_003100858.1 | hypothetical protein | - |
| QOT07_RS25510 | 58497..58853 | - | 357 | WP_000215515.1 | cupin domain-containing protein | - |
| QOT07_RS25515 | 58843..59244 | - | 402 | WP_001293886.1 | DUF86 domain-containing protein | - |
| QOT07_RS25520 | 59241..59531 | - | 291 | WP_001247892.1 | nucleotidyltransferase | - |
| QOT07_RS25525 | 59690..62678 | + | 2989 | Protein_73 | Tn3 family transposase TnpA_ISPa38 | Transposase |
| QOT07_RS25530 | 62647..63414 | - | 768 | WP_223610753.1 | glutathione S-transferase N-terminal domain-containing protein | - |
| QOT07_RS25535 | 63547..64086 | - | 540 | WP_004099036.1 | Peptide methionine sulfoxide reductase MsrA 3 | VF |
| QOT07_RS25540 | 64088..64531 | - | 444 | WP_004099035.1 | Peptide methionine sulfoxide reductase MsrB | VF |
| QOT07_RS25545 | 64656..65687 | + | 1032 | WP_032425611.1 | IS630 family transposase ISEc33 | Transposase |
| QOT07_RS25550 | 65833..66708 | - | 876 | WP_011191349.1 | LysR family transcriptional regulator | - |
| QOT07_RS25555 | 66937..68169 | + | 1233 | WP_004357650.1 | bifunctional alpha/beta hydrolase/OsmC family protein | - |
| QOT07_RS25560 | 68277..68765 | + | 489 | WP_045269765.1 | Peptide methionine sulfoxide reductase MsrA | VF |
| QOT07_RS25565 | 68765..69790 | + | 1026 | WP_004357654.1 | hypothetical protein | VF |
| QOT07_RS25570 | 70187..70681 | - | 495 | WP_004099028.1 | MarR family winged helix-turn-helix transcriptional regulator | - |
| QOT07_RS25575 | 71239..71727 | - | 489 | WP_004099027.1 | DUF417 family protein | - |
| QOT07_RS25580 | 72025..72384 | + | 360 | WP_166479491.1 | DUF6314 family protein | - |
| QOT07_RS25585 | 72423..73382 | - | 960 | WP_004099025.1 | YeeE/YedE thiosulfate transporter family protein | - |
| QOT07_RS25590 | 73409..73831 | - | 423 | WP_223296479.1 | MarR family transcriptional regulator | - |
| QOT07_RS25595 | 74199..75095 | + | 897 | WP_011191354.1 | LysR family transcriptional regulator | - |
| QOT07_RS25600 | 75092..75328 | - | 237 | WP_026227538.1 | DUF2274 domain-containing protein | - |
| QOT07_RS25605 | 75331..76551 | - | 1221 | WP_011191355.1 | hypothetical protein | VF |
| QOT07_RS25610 | 76548..77597 | - | 1050 | WP_129941811.1 | P-type conjugative transfer protein TrbG | - |
| QOT07_RS25615 | 77594..77914 | - | 321 | Protein_91 | conjugal transfer protein TrbF | - |
| QOT07_RS25620 | 78192..79232 | - | 1041 | WP_283604543.1 | IS110 family transposase IS4321 | Transposase |
| QOT07_RS25625 | 79257..79961 | + | 705 | WP_047389788.1 | IS6 family transposase IS26 | Transposase |
| QOT07_RS25630 | 80141..80788 | - | 648 | WP_024262784.1 | recombinase family protein | - |
| QOT07_RS25635 | 80954..84073 | - | 3120 | WP_283604520.1 | type I restriction endonuclease subunit R | - |
| QOT07_RS25640 | 84207..85394 | - | 1188 | WP_050110598.1 | restriction endonuclease subunit S | - |
| QOT07_RS25645 | 85391..86947 | - | 1557 | WP_050110596.1 | type I restriction-modification system subunit M | - |
| QOT07_RS25650 | 87160..87471 | - | 312 | WP_050110594.1 | putative addiction module antidote protein | - |
| QOT07_RS25655 | 87476..87793 | - | 318 | WP_050110592.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| QOT07_RS25660 | 88367..89329 | + | 963 | WP_269129741.1 | zincin-like metallopeptidase domain-containing protein | - |
| QOT07_RS25665 | 89514..90026 | - | 513 | WP_064645499.1 | hypothetical protein | VF |
| QOT07_RS25670 | 90019..90765 | - | 747 | WP_050110586.1 | hypothetical protein | Relaxase |
| QOT07_RS25675 | 90775..92610 | - | 1836 | WP_226716605.1 | TraG/TraD/VirD4 family protein | - |
| QOT07_RS25680 | 93560..94003 | - | 444 | WP_145529656.1 | H-NS family nucleoid-associated regulatory protein | - |
| QOT07_RS25685 | 94065..96287 | - | 2223 | WP_145529654.1 | type IA DNA topoisomerase | - |
| QOT07_RS25690 | 96290..96595 | - | 306 | WP_040118350.1 | conjugal transfer protein | - |
| QOT07_RS25695 | 96699..97103 | - | 405 | WP_040118349.1 | cag pathogenicity island Cag12 family protein | - |
| QOT07_RS25700 | 97090..98118 | - | 1029 | WP_040118348.1 | Type IV secretion system protein VirB11 | VF |
| QOT07_RS25705 | 98129..99409 | - | 1281 | WP_283604533.1 | hypothetical protein | VF |
| QOT07_RS25710 | 99406..100302 | - | 897 | WP_283604534.1 | Type IV secretion system protein virB9 | VF |
| QOT07_RS25715 | 100302..100985 | - | 684 | WP_283604535.1 | Type IV secretion system protein PtlE | VF |
| QOT07_RS25720 | 100978..101115 | - | 138 | WP_169818577.1 | hypothetical protein | - |
| QOT07_RS25725 | 101185..102186 | - | 1002 | WP_032490878.1 | type IV secretion system protein | - |
| QOT07_RS25730 | 102179..102472 | - | 294 | WP_032490877.1 | EexN family lipoprotein | - |
| QOT07_RS25735 | 102487..103209 | - | 723 | WP_283604538.1 | type IV secretion system protein | - |
| QOT07_RS25740 | 103221..105968 | - | 2748 | WP_283604539.1 | Type IV secretion system protein virB4 | VF |
| QOT07_RS25745 | 105978..106271 | - | 294 | Protein_117 | TrbC/VirB2 family protein | - |
| QOT07_RS25750 | 106281..106949 | - | 669 | WP_008815930.1 | hypothetical protein | VF |
| QOT07_RS25755 | 106970..107194 | - | 225 | WP_008815931.1 | hypothetical protein | - |
| QOT07_RS25760 | 107273..107728 | - | 456 | WP_016361119.1 | transcription termination/antitermination NusG family protein | - |
| QOT07_RS25765 | 107987..108349 | + | 363 | WP_008815933.1 | helix-turn-helix transcriptional regulator | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|