MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 103859 bp
Accession: NZ_OX352944 Location: 595772..699630 Organism: Streptococcus suis isolate 861160_LM_H Replicon: chromosome
Accession: NZ_OX352944 Location: 595772..699630 Organism: Streptococcus suis isolate 861160_LM_H Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| QNH68_RS02915 | 591349..592512 | - | 1164 | WP_156688692.1 | IS110 family transposase | - |
| QNH68_RS02920 | 593063..593347 | + | 285 | Protein_557 | ISL3 family transposase | - |
| QNH68_RS02925 | 593795..594433 | - | 639 | WP_011922101.1 | MBL fold metallo-hydrolase | - |
| QNH68_RS02930 | 594550..597009 | + | 2460 | WP_232049080.1 | bifunctional DnaQ family exonuclease/ATP-dependent helicase | - |
| QNH68_RS02935 | 597169..598245 | + | 1077 | WP_074390225.1 | glutamate 5-kinase | - |
| QNH68_RS02940 | 598310..599548 | + | 1239 | WP_011922104.1 | glutamate-5-semialdehyde dehydrogenase | - |
| QNH68_RS02945 | 599558..600343 | + | 786 | WP_011922105.1 | pyrroline-5-carboxylate reductase | - |
| QNH68_RS02950 | 600366..600770 | - | 405 | WP_011922106.1 | TetR/AcrR family transcriptional regulator | - |
| QNH68_RS02955 | 600897..601748 | + | 852 | WP_002938910.1 | DegV family protein | - |
| QNH68_RS02960 | 601847..603106 | - | 1260 | WP_011922108.1 | PLP-dependent aminotransferase family protein | - |
| QNH68_RS02965 | 603229..603963 | + | 735 | WP_012775019.1 | peroxide stress protein YaaA | - |
| QNH68_RS02970 | 604068..605513 | + | 1446 | WP_012775020.1 | Polyisoprenyl-teichoic acid--peptidoglycan teichoic acid transferase TagU | VF |
| QNH68_RS02975 | 605531..606220 | + | 690 | WP_011922111.1 | putative capsular polysaccharide biosynthesis protein YwqC | VF |
| QNH68_RS02980 | 606230..606907 | + | 678 | WP_012775429.1 | Tyrosine-protein kinase CpsD | VF |
| QNH68_RS02985 | 606946..607677 | + | 732 | WP_002936359.1 | Tyrosine-protein phosphatase CpsB | VF |
| QNH68_RS02990 | 607702..609081 | + | 1380 | WP_002936357.1 | hypothetical protein | VF |
| QNH68_RS02995 | 609116..610285 | + | 1170 | WP_282920893.1 | glycosyltransferase family 1 protein | - |
| QNH68_RS03000 | 610289..611446 | + | 1158 | WP_002936352.1 | glycosyltransferase family 4 protein | - |
| QNH68_RS03005 | 611760..613205 | + | 1446 | WP_011922116.1 | glycosyltransferase family 2 protein | - |
| QNH68_RS03010 | 613273..614472 | + | 1200 | WP_009909570.1 | oligosaccharide repeat unit polymerase Wzy | - |
| QNH68_RS03015 | 614611..615609 | + | 999 | WP_002936347.1 | hypothetical protein | VF |
| QNH68_RS03020 | 615602..616606 | + | 1005 | WP_011922118.1 | Undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase | VF |
| QNH68_RS03025 | 616646..616957 | + | 312 | WP_009909574.1 | hypothetical protein | - |
| QNH68_RS03030 | 617426..617665 | + | 240 | WP_226961159.1 | hypothetical protein | - |
| QNH68_RS03035 | 617833..618012 | + | 180 | Protein_580 | acylneuraminate cytidylyltransferase | - |
| QNH68_RS03040 | 618449..619420 | + | 972 | WP_011922741.1 | hypothetical protein | VF |
| QNH68_RS03045 | 619429..620835 | + | 1407 | WP_002936324.1 | hypothetical protein | VF |
| QNH68_RS03050 | 621358..622374 | + | 1017 | WP_002936321.1 | N,N'-diacetyllegionaminic acid synthase | VF |
| QNH68_RS03055 | 622386..623519 | + | 1134 | WP_009909585.1 | Polysialic acid biosynthesis protein P7 | VF |
| QNH68_RS03060 | 623509..624159 | + | 651 | WP_011922122.1 | Putative acetyltransferase EpsM | VF |
| QNH68_RS03065 | 624168..625400 | + | 1233 | WP_012775023.1 | N-acylneuraminate cytidylyltransferase | VF |
| QNH68_RS03070 | 625597..626470 | + | 874 | Protein_587 | IS5 family transposase ISSth7 | Transposase |
| QNH68_RS03075 | 626720..627567 | + | 848 | WP_087892711.1 | IS630 family transposase | - |
| QNH68_RS03080 | 627604..627789 | + | 186 | WP_014635926.1 | hypothetical protein | - |
| QNH68_RS03085 | 627770..628057 | + | 288 | WP_011922127.1 | IS66 family transposase ISDeal1 | Transposase |
| QNH68_RS03090 | 628174..628380 | + | 207 | WP_002936301.1 | IS66 family transposase ISBthe6 | Transposase |
| QNH68_RS03095 | 628334..629666 | + | 1333 | Protein_592 | IS66 family transposase ISSwo2 | Transposase |
| QNH68_RS03100 | 629801..630691 | + | 891 | Protein_593 | IS30 family transposase ISSpn8 | Transposase |
| QNH68_RS03105 | 631051..631964 | - | 914 | Protein_594 | tyrosine-type recombinase/integrase | - |
| QNH68_RS03110 | 632059..632313 | + | 255 | WP_014636268.1 | hypothetical protein | - |
| QNH68_RS03115 | 632347..632712 | + | 366 | WP_228381327.1 | D-alanine--D-alanine ligase | - |
| QNH68_RS03120 | 633050..635407 | - | 2358 | WP_012775024.1 | hypothetical protein | - |
| QNH68_RS03125 | 635624..636904 | + | 1281 | WP_012775025.1 | 3-phosphoshikimate 1-carboxyvinyltransferase | - |
| QNH68_RS03130 | 636913..637404 | + | 492 | WP_011922141.1 | shikimate kinase | - |
| QNH68_RS03135 | 637395..638222 | + | 828 | WP_009909609.1 | prephenate dehydratase | - |
| QNH68_RS03140 | 638234..639559 | + | 1326 | WP_011922144.1 | LCP family protein | - |
| QNH68_RS03145 | 639625..640023 | + | 399 | Protein_602 | TRAM domain-containing protein | - |
| QNH68_RS03150 | 640274..640447 | + | 174 | WP_032510356.1 | hypothetical protein | - |
| QNH68_RS03155 | 640444..641262 | + | 819 | WP_074390218.1 | replication initiator protein A | - |
| QNH68_RS03160 | 641411..642766 | + | 1356 | WP_074400600.1 | DNA (cytosine-5-)-methyltransferase | - |
| QNH68_RS03165 | 642750..643178 | + | 429 | WP_074400601.1 | hypothetical protein | - |
| QNH68_RS03170 | 643189..643578 | + | 390 | WP_074389343.1 | hypothetical protein | - |
| QNH68_RS03175 | 643581..643814 | + | 234 | WP_001005708.1 | hypothetical protein | - |
| QNH68_RS03180 | 643817..644401 | + | 585 | WP_074389344.1 | CPBP family intramembrane metalloprotease | - |
| QNH68_RS03185 | 644478..644966 | + | 489 | WP_074400602.1 | hypothetical protein | - |
| QNH68_RS03190 | 644966..646783 | + | 1818 | Protein_611 | type IV secretory system conjugative DNA transfer family protein | - |
| QNH68_RS03195 | 646801..647043 | + | 243 | WP_024405437.1 | hypothetical protein | - |
| QNH68_RS03200 | 647062..647916 | + | 855 | WP_024405438.1 | conjugal transfer protein TrbL | - |
| QNH68_RS03205 | 647978..648331 | + | 354 | WP_001097579.1 | PrgI family protein | - |
| QNH68_RS03210 | 648288..650639 | + | 2352 | WP_029750526.1 | ATPase AAA | - |
| QNH68_RS03215 | 650641..653442 | + | 2802 | WP_074400605.1 | phage tail tip lysozyme | - |
| QNH68_RS03220 | 653505..654350 | - | 846 | WP_074390209.1 | nucleotidyl transferase AbiEii/AbiGii toxin family protein | Toxin Detail |
| QNH68_RS03225 | 654347..654937 | - | 591 | WP_000037239.1 | type IV toxin-antitoxin system AbiEi family antitoxin domain-containing protein | Antitoxin Detail |
| QNH68_RS03230 | 655215..660110 | + | 4896 | WP_074390207.1 | hypothetical protein | VF |
| QNH68_RS03235 | 660111..660302 | + | 192 | WP_074390206.1 | calcium-binding protein | - |
| QNH68_RS03240 | 660286..660837 | + | 552 | WP_074390205.1 | hypothetical protein | - |
| QNH68_RS03245 | 660886..667710 | + | 6825 | WP_074400606.1 | SNF2-related protein | - |
| QNH68_RS03250 | 667781..668080 | + | 300 | WP_074389384.1 | DUF5962 family protein | - |
| QNH68_RS03255 | 668094..668390 | + | 297 | WP_074400607.1 | DUF5966 family protein | - |
| QNH68_RS03260 | 668730..668903 | + | 174 | WP_012775117.1 | type A2 lanthipeptide | - |
| QNH68_RS03265 | 668987..671482 | + | 2496 | WP_232049082.1 | DUF4135 domain-containing protein | - |
| QNH68_RS03270 | 671502..673571 | + | 2070 | WP_232049084.1 | cysteine peptidase family C39 domain-containing protein | - |
| QNH68_RS03275 | 673543..674457 | + | 915 | WP_074400609.1 | Bacitracin transport ATP-binding protein BcrA | VF |
| QNH68_RS03280 | 674435..675154 | + | 720 | WP_074400610.1 | ABC transporter permease | - |
| QNH68_RS03285 | 675164..675859 | + | 696 | WP_074400611.1 | ABC transporter permease | - |
| QNH68_RS03290 | 676381..677364 | + | 984 | WP_232049085.1 | hypothetical protein | - |
| QNH68_RS03295 | 677342..677941 | + | 600 | WP_024381910.1 | response regulator transcription factor | - |
| QNH68_RS03300 | 679533..680171 | + | 639 | WP_074400613.1 | peptidylprolyl isomerase | - |
| QNH68_RS03305 | 680211..681287 | + | 1077 | WP_074400614.1 | toprim domain-containing protein | - |
| QNH68_RS03310 | 681341..681568 | + | 228 | WP_024418314.1 | DUF5965 family protein | - |
| QNH68_RS03315 | 681565..681954 | + | 390 | WP_024405544.1 | DUF5945 family protein | - |
| QNH68_RS03320 | 682004..682294 | + | 291 | WP_024405543.1 | hypothetical protein | - |
| QNH68_RS03325 | 682364..682840 | + | 477 | WP_024405542.1 | type II toxin-antitoxin system antitoxin PezA | Antitoxin Detail |
| QNH68_RS03330 | 682840..683616 | + | 777 | WP_024405541.1 | type II toxin-antitoxin system toxin PezT | Toxin Detail |
| QNH68_RS03335 | 683613..685673 | + | 2061 | WP_074400615.1 | AAA family ATPase | - |
| QNH68_RS03340 | 685660..687474 | + | 1815 | WP_024405539.1 | ATP-dependent helicase | - |
| QNH68_RS03345 | 687569..688732 | - | 1164 | WP_024405538.1 | ATP-binding protein | - |
| QNH68_RS03350 | 689102..689461 | + | 360 | WP_024405537.1 | SAG1252 family conjugative relaxosome accessory protein | - |
| QNH68_RS03355 | 689471..689836 | + | 366 | WP_024405536.1 | plasmid mobilization relaxosome protein MobC | - |
| QNH68_RS03360 | 689823..691685 | + | 1863 | WP_074400616.1 | SAG1250 family conjugative relaxase | - |
| QNH68_RS03365 | 691770..692624 | - | 855 | WP_024405534.1 | helix-turn-helix transcriptional regulator | - |
| QNH68_RS03370 | 693345..696176 | + | 2832 | WP_173018630.1 | type 2 lanthipeptide synthetase LanM | - |
| QNH68_RS03375 | 696274..696480 | + | 207 | WP_024405531.1 | hypothetical protein | VF |
| QNH68_RS03380 | 696493..696729 | + | 237 | WP_024405530.1 | hypothetical protein | VF |
| QNH68_RS03385 | 696996..697733 | + | 738 | WP_024405529.1 | flavodoxin family protein | - |
| QNH68_RS03390 | 697723..699834 | + | 2112 | WP_024405528.1 | peptidase domain-containing ABC transporter | - |
| QNH68_RS03395 | 699847..700233 | + | 387 | WP_024405527.1 | hypothetical protein | - |
| QNH68_RS03400 | 700287..701594 | + | 1308 | WP_024405526.1 | S8 family serine peptidase | - |
| QNH68_RS03405 | 702231..702455 | + | 225 | WP_024405525.1 | helix-turn-helix transcriptional regulator | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|