Detailed information of TA system
Bioinformatically predictedOverview
TA module
Type | II | Classification (family/domain) | sezT-pezT/zeta-couple_hipB |
Location | 682364..683616 | Replicon | chromosome |
Accession | NZ_OX352944 | ||
Organism | Streptococcus suis isolate 861160_LM_H |
Toxin (Protein)
Gene name | sezT | Uniprot ID | - |
Locus tag | QNH68_RS03330 | Protein ID | WP_024405541.1 |
Coordinates | 682840..683616 (+) | Length | 259 a.a. |
Antitoxin (Protein)
Gene name | pezT | Uniprot ID | - |
Locus tag | QNH68_RS03325 | Protein ID | WP_024405542.1 |
Coordinates | 682364..682840 (+) | Length | 159 a.a. |
Genomic Context
Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
---|---|---|---|---|---|---|
QNH68_RS03300 | 679533..680171 | + | 639 | WP_074400613.1 | peptidylprolyl isomerase | - |
QNH68_RS03305 | 680211..681287 | + | 1077 | WP_074400614.1 | toprim domain-containing protein | - |
QNH68_RS03310 | 681341..681568 | + | 228 | WP_024418314.1 | DUF5965 family protein | - |
QNH68_RS03315 | 681565..681954 | + | 390 | WP_024405544.1 | DUF5945 family protein | - |
QNH68_RS03320 | 682004..682294 | + | 291 | WP_024405543.1 | hypothetical protein | - |
QNH68_RS03325 | 682364..682840 | + | 477 | WP_024405542.1 | type II toxin-antitoxin system antitoxin PezA | Antitoxin |
QNH68_RS03330 | 682840..683616 | + | 777 | WP_024405541.1 | type II toxin-antitoxin system toxin PezT | Toxin |
QNH68_RS03335 | 683613..685673 | + | 2061 | WP_074400615.1 | AAA family ATPase | - |
QNH68_RS03340 | 685660..687474 | + | 1815 | WP_024405539.1 | ATP-dependent helicase | - |
Associated MGEs
MGE detail |
Similar MGEs |
Relative position |
MGE Type | Cargo ARG | Virulence gene | Coordinates | Length (bp) |
---|---|---|---|---|---|---|---|
- | inside | Integrative and Conjugative Element | - | neuB | 595772..699630 | 103858 |
Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.
Sequences
Toxin
Download Length: 259 a.a. Molecular weight: 29222.90 Da Isoelectric Point: 5.6995
>T296678 WP_024405541.1 NZ_OX352944:682840-683616 [Streptococcus suis]
MRLEEFSEEEFQKALQRTIRAQSRGKTIPNQPRAILLGGQSGAGKTTIHRIKQKEFQGNIIIIDGDSYRSQHPNYLALQD
KYGKDSVDYTKGFAGKMVEHLVDELSTQGYHLLIEGTLRTTQVPRQTAQLLSSKGYQVSLAVIGTKPELSYLSTLIRYEE
LYAIDPNQARATPKEHHDGIVENLVDNLKELESDKLFDQIQIYQRDRTCIYDSETDEGSAAEVLQNCLFGKWSKVEEEML
KVGQERLGELVSANGEKK
MRLEEFSEEEFQKALQRTIRAQSRGKTIPNQPRAILLGGQSGAGKTTIHRIKQKEFQGNIIIIDGDSYRSQHPNYLALQD
KYGKDSVDYTKGFAGKMVEHLVDELSTQGYHLLIEGTLRTTQVPRQTAQLLSSKGYQVSLAVIGTKPELSYLSTLIRYEE
LYAIDPNQARATPKEHHDGIVENLVDNLKELESDKLFDQIQIYQRDRTCIYDSETDEGSAAEVLQNCLFGKWSKVEEEML
KVGQERLGELVSANGEKK
Download Length: 777 bp
Antitoxin
Download Length: 159 a.a. Molecular weight: 18303.70 Da Isoelectric Point: 4.3241
>AT296678 WP_024405542.1 NZ_OX352944:682364-682840 [Streptococcus suis]
MIGDNIKSLRRTHDLTQPEFAKMVGISRNSLSRYENGTSTVSTELIDRICQKFNVSYVDIVGEDKMLTPVEDYQLTLKVE
VIKERGAAILSQLYRYQDSQDIAFDDESNPWILMSDDLAELINTKIYLVDTFDEIERYNGYLDGIERMLDMVHHWVVA
MIGDNIKSLRRTHDLTQPEFAKMVGISRNSLSRYENGTSTVSTELIDRICQKFNVSYVDIVGEDKMLTPVEDYQLTLKVE
VIKERGAAILSQLYRYQDSQDIAFDDESNPWILMSDDLAELINTKIYLVDTFDEIERYNGYLDGIERMLDMVHHWVVA
Download Length: 477 bp
Similar Proteins
Only experimentally validated proteins are listed.
Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
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Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
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Structures
Toxin
Source | ID | Structure |
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Antitoxin
Source | ID | Structure |
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