MGE detailed information
MGE type: IScluster/Tn MGE length: 21029 bp
Accession: NZ_OW967264 Location: 45944..66972 Organism: Citrobacter freundii isolate 22 Replicon: plasmid P1
Accession: NZ_OW967264 Location: 45944..66972 Organism: Citrobacter freundii isolate 22 Replicon: plasmid P1
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LQ176_RS25045 (AI2826V1_4864) | 42489..43280 | - | 792 | WP_008322208.1 | site-specific integrase | - |
| LQ176_RS25050 (AI2826V1_4865) | 43270..43584 | - | 315 | WP_008322211.1 | hypothetical protein | - |
| LQ176_RS25055 (AI2826V1_4866) | 43586..43891 | - | 306 | WP_008322213.1 | type II toxin-antitoxin system toxin CcdB | Toxin Detail |
| LQ176_RS25060 (AI2826V1_4867) | 43893..44111 | - | 219 | WP_032934863.1 | type II toxin-antitoxin system antitoxin CcdA | Antitoxin Detail |
| LQ176_RS25065 (AI2826V1_4868) | 44823..45797 | - | 975 | WP_181219984.1 | sensor domain-containing diguanylate cyclase | - |
| LQ176_RS25080 (AI2826V1_4873) | 47911..48540 | - | 630 | WP_181219980.1 | IS6 family transposase IS26 | Transposase |
| LQ176_RS25085 (AI2826V1_4874) | 48531..49043 | + | 513 | WP_230133460.1 | DM13 domain-containing protein | - |
| LQ176_RS25090 (AI2826V1_4875) | 49031..50302 | + | 1272 | WP_004357638.1 | MFS transporter | - |
| LQ176_RS25095 (AI2826V1_4876) | 50333..50734 | - | 402 | WP_004099044.1 | RidA family protein | - |
| LQ176_RS25100 (AI2826V1_4877) | 50841..51290 | - | 450 | WP_004099042.1 | hypothetical protein | - |
| LQ176_RS25105 (AI2826V1_4878) | 51378..51950 | - | 573 | WP_004099040.1 | hypothetical protein | - |
| LQ176_RS25110 (AI2826V1_4879) | 52042..53010 | - | 969 | WP_018716208.1 | magnesium and cobalt transport protein CorA | - |
| LQ176_RS25115 (AI2826V1_4880) | 53291..54295 | - | 1005 | WP_000427623.1 | IS110 family transposase IS4321R | Transposase |
| LQ176_RS25120 (AI2826V1_4881) | 54374..54931 | - | 558 | WP_003100847.1 | Tn3 family transposase TnpR_ISPa38 | Transposase |
| LQ176_RS25125 (AI2826V1_4882) | 54925..55296 | - | 372 | WP_003100853.1 | hypothetical protein | - |
| LQ176_RS25130 (AI2826V1_4883) | 55293..55793 | - | 501 | WP_003100856.1 | hypothetical protein | - |
| LQ176_RS25135 (AI2826V1_4884) | 55790..56116 | - | 327 | WP_003100858.1 | hypothetical protein | - |
| LQ176_RS25140 (AI2826V1_4885) | 56371..56727 | - | 357 | WP_000215515.1 | cupin domain-containing protein | - |
| LQ176_RS25145 (AI2826V1_4886) | 56717..57118 | - | 402 | WP_230133461.1 | DUF86 domain-containing protein | - |
| LQ176_RS25150 (AI2826V1_4887) | 57115..57405 | - | 291 | WP_001247892.1 | nucleotidyltransferase | - |
| LQ176_RS25155 (AI2826V1_4888) | 57659..58363 | - | 705 | WP_001067848.1 | IS6 family transposase IS15DI | Transposase |
| LQ176_RS25160 (AI2826V1_4889) | 58449..59471 | + | 1023 | WP_008322227.1 | helicase UvrD | - |
| LQ176_RS25165 (AI2826V1_4890) | 59724..59954 | + | 231 | WP_001261276.1 | type II toxin-antitoxin system VapB family antitoxin | Antitoxin Detail |
| LQ176_RS25170 (AI2826V1_4891) | 59951..60367 | + | 417 | WP_008322233.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| LQ176_RS25175 (AI2826V1_4892) | 60913..61833 | - | 921 | WP_008322235.1 | carbohydrate kinase | - |
| LQ176_RS25180 (AI2826V1_4893) | 61830..63170 | - | 1341 | WP_230133462.1 | hypothetical protein | - |
| LQ176_RS25185 (AI2826V1_4894) | 63228..66236 | - | 3009 | WP_001556712.1 | Tn3 family transposase ISEc63 | Transposase |
| LQ176_RS25190 (AI2826V1_4895) | 66400..66972 | + | 573 | WP_001556711.1 | Tn3 family transposase TnpR_Tn3 | Transposase |
| LQ176_RS25195 (AI2826V1_4896) | 66981..67385 | + | 405 | WP_004118313.1 | ArsA-related P-loop ATPase | - |
| LQ176_RS25200 (AI2826V1_4897) | 67416..67841 | - | 426 | WP_000065758.1 | glutaredoxin-dependent arsenate reductase | - |
| LQ176_RS25205 (AI2826V1_4898) | 67854..69143 | - | 1290 | WP_000922630.1 | arsenite efflux transporter membrane subunit ArsB | - |
| LQ176_RS25210 (AI2826V1_4899) | 69192..70943 | - | 1752 | WP_001556710.1 | arsenite efflux transporter ATPase subunit ArsA | - |
| LQ176_RS25215 (AI2826V1_4900) | 70961..71323 | - | 363 | WP_000783215.1 | arsenite efflux transporter metallochaperone ArsD | - |
| LQ176_RS25220 (AI2826V1_4901) | 71371..71724 | - | 354 | WP_001114073.1 | As(III)-sensing metalloregulatory transcriptional repressor ArsR | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|