MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 112775 bp
Accession: NZ_OW967264 Location: 1..112775 Organism: Citrobacter freundii isolate 22 Replicon: plasmid P1
Accession: NZ_OW967264 Location: 1..112775 Organism: Citrobacter freundii isolate 22 Replicon: plasmid P1
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LQ176_RS24750 (AI2826V1_4806) | 538..972 | - | 435 | WP_224776423.1 | hypothetical protein | - |
| LQ176_RS24755 (AI2826V1_4807) | 981..1397 | - | 417 | WP_071687483.1 | hypothetical protein | - |
| LQ176_RS24760 (AI2826V1_4808) | 1381..1521 | - | 141 | WP_250323569.1 | hypothetical protein | - |
| LQ176_RS24765 (AI2826V1_4809) | 1570..1794 | - | 225 | WP_071687485.1 | TraR/DksA C4-type zinc finger protein | - |
| LQ176_RS24770 (AI2826V1_4810) | 1906..3267 | - | 1362 | WP_071687486.1 | F-type conjugal transfer pilus assembly protein TraB | - |
| LQ176_RS24775 (AI2826V1_4811) | 3254..3994 | - | 741 | WP_071687487.1 | type-F conjugative transfer system secretin TraK | - |
| LQ176_RS24780 (AI2826V1_4812) | 3984..4547 | - | 564 | WP_071687488.1 | type IV conjugative transfer system protein TraE | - |
| LQ176_RS24785 (AI2826V1_4813) | 4567..4872 | - | 306 | WP_071687511.1 | type IV conjugative transfer system protein TraL | - |
| LQ176_RS24790 (AI2826V1_4814) | 4875..5234 | - | 360 | WP_071687489.1 | type IV conjugative transfer system pilin TraA | - |
| LQ176_RS24795 (AI2826V1_4815) | 5340..5507 | - | 168 | WP_164845037.1 | hypothetical protein | - |
| LQ176_RS24800 (AI2826V1_4816) | 5724..6005 | - | 282 | WP_071687490.1 | conjugal transfer protein TraJ | - |
| LQ176_RS24805 (AI2826V1_4817) | 6512..6895 | - | 384 | WP_071687491.1 | conjugal transfer relaxosome DNA-binding protein TraM | - |
| LQ176_RS24810 (AI2826V1_4818) | 7364..7819 | + | 456 | WP_071687492.1 | transglycosylase SLT domain-containing protein | - |
| LQ176_RS24815 (AI2826V1_4819) | 7830..8360 | - | 531 | WP_071687493.1 | antirestriction protein | - |
| LQ176_RS26660 (AI2826V1_4820) | 8612..8734 | - | 123 | WP_256259396.1 | hypothetical protein | - |
| LQ176_RS24820 (AI2826V1_4821) | 8753..8962 | - | 210 | WP_071687494.1 | hypothetical protein | - |
| LQ176_RS24825 | 9118..9399 | + | 282 | WP_127702263.1 | hypothetical protein | - |
| LQ176_RS24830 (AI2826V1_4822) | 9415..9870 | - | 456 | WP_127663648.1 | conjugation system SOS inhibitor PsiB family protein | - |
| LQ176_RS24835 (AI2826V1_4823) | 9981..10307 | - | 327 | WP_071698816.1 | theronine dehydrogenase | - |
| LQ176_RS24840 (AI2826V1_4824) | 10304..11032 | - | 729 | WP_071687496.1 | plasmid SOS inhibition protein A | - |
| LQ176_RS24845 (AI2826V1_4825) | 11029..11463 | - | 435 | WP_114141097.1 | conjugation system SOS inhibitor PsiB | - |
| LQ176_RS24850 (AI2826V1_4826) | 11506..13557 | - | 2052 | WP_127663647.1 | ParB/RepB/Spo0J family partition protein | - |
| LQ176_RS24855 (AI2826V1_4827) | 13626..13859 | - | 234 | WP_071687499.1 | DUF905 domain-containing protein | - |
| LQ176_RS24860 (AI2826V1_4828) | 13911..14471 | - | 561 | WP_071687500.1 | single-stranded DNA-binding protein | - |
| LQ176_RS24865 | 14805..14947 | + | 143 | Protein_25 | hypothetical protein | - |
| LQ176_RS24870 (AI2826V1_4829) | 15354..15917 | - | 564 | WP_071687501.1 | class I SAM-dependent methyltransferase | - |
| LQ176_RS24875 (AI2826V1_4830) | 15964..17346 | - | 1383 | WP_071687502.1 | DUF3560 domain-containing protein | - |
| LQ176_RS24880 (AI2826V1_4831) | 17398..17628 | - | 231 | WP_071687503.1 | hypothetical protein | - |
| LQ176_RS24885 (AI2826V1_4832) | 17721..17948 | - | 228 | WP_071687504.1 | hypothetical protein | - |
| LQ176_RS24890 | 18216..18364 | + | 149 | Protein_30 | hypothetical protein | - |
| LQ176_RS26665 | 18489..18617 | - | 129 | WP_284454171.1 | hypothetical protein | - |
| LQ176_RS24895 (AI2826V1_4833) | 18634..18967 | - | 334 | Protein_32 | DNA polymerase III subunit theta | - |
| LQ176_RS24900 (AI2826V1_4834) | 19203..19637 | - | 435 | WP_071687506.1 | DUF1380 family protein | - |
| LQ176_RS24905 (AI2826V1_4835) | 19703..20131 | - | 429 | WP_071446529.1 | antirestriction protein | - |
| LQ176_RS24910 (AI2826V1_4836) | 20549..21316 | - | 768 | WP_071446530.1 | hypothetical protein | - |
| LQ176_RS24915 (AI2826V1_4837) | 21384..21788 | - | 405 | WP_071446531.1 | DUF1380 family protein | - |
| LQ176_RS24920 (AI2826V1_4838) | 21844..22263 | - | 420 | WP_071446532.1 | DUF1380 family protein | - |
| LQ176_RS24925 (AI2826V1_4839) | 22274..22495 | - | 222 | WP_071446533.1 | hypothetical protein | - |
| LQ176_RS24930 (AI2826V1_4840) | 22495..23175 | - | 681 | WP_071446534.1 | DNA methylase | - |
| LQ176_RS24935 (AI2826V1_4841) | 23552..23899 | - | 348 | WP_071446535.1 | hypothetical protein | - |
| LQ176_RS24940 (AI2826V1_4842) | 23932..24867 | - | 936 | WP_071446536.1 | DUF1281 domain-containing protein | - |
| LQ176_RS24945 (AI2826V1_4843) | 25408..25830 | + | 423 | WP_045911947.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| LQ176_RS24950 (AI2826V1_4844) | 25830..27104 | + | 1275 | WP_071687509.1 | Y-family DNA polymerase | - |
| LQ176_RS24955 (AI2826V1_4845) | 27153..28406 | - | 1254 | WP_224776425.1 | RES family NAD+ phosphorylase | - |
| LQ176_RS24960 (AI2826V1_4846) | 28578..28901 | - | 324 | WP_071446655.1 | hypothetical protein | - |
| LQ176_RS24965 (AI2826V1_4847) | 28898..29305 | - | 408 | WP_224770004.1 | hypothetical protein | - |
| LQ176_RS24970 (AI2826V1_4848) | 29335..30366 | - | 1032 | WP_071446653.1 | ParB/RepB/Spo0J family partition protein | - |
| LQ176_RS24975 (AI2826V1_4849) | 30366..31232 | - | 867 | WP_071446652.1 | AAA family ATPase | - |
| LQ176_RS24980 (AI2826V1_4851) | 31933..32325 | - | 393 | WP_071446650.1 | hypothetical protein | - |
| LQ176_RS24985 (AI2826V1_4852) | 32462..32965 | - | 504 | WP_071446649.1 | peptidase M14 | - |
| LQ176_RS24990 (AI2826V1_4853) | 33127..33420 | + | 294 | WP_213707353.1 | hypothetical protein | - |
| LQ176_RS24995 (AI2826V1_4854) | 33835..34476 | + | 642 | WP_000497473.1 | Tn3 family transposase TnpR_TnEc1 | Transposase |
| LQ176_RS25000 (AI2826V1_4855) | 34514..34861 | + | 348 | WP_106108091.1 | hypothetical protein | - |
| LQ176_RS25005 (AI2826V1_4856) | 34851..35204 | + | 354 | WP_224770005.1 | hypothetical protein | - |
| LQ176_RS25010 (AI2826V1_4857) | 35241..36179 | + | 939 | WP_008322195.1 | ISNCY family transposase ISRor2 | VF |
| LQ176_RS25015 (AI2826V1_4858) | 36266..37060 | - | 795 | WP_008322197.1 | DNA-binding transcriptional repressor YgbI | - |
| LQ176_RS25020 (AI2826V1_4859) | 37254..38162 | + | 909 | WP_008322199.1 | NAD(P)-dependent oxidoreductase | - |
| LQ176_RS25025 (AI2826V1_4860) | 38159..39421 | + | 1263 | WP_008322201.1 | four-carbon acid sugar kinase family protein | - |
| LQ176_RS25030 (AI2826V1_4861) | 39418..40056 | + | 639 | WP_008322203.1 | aldolase | - |
| LQ176_RS25035 (AI2826V1_4862) | 40061..40837 | + | 777 | WP_008322204.1 | HPr family phosphocarrier protein | - |
| LQ176_RS25040 (AI2826V1_4863) | 40923..42290 | + | 1368 | WP_008322207.1 | GntP family transporter | - |
| LQ176_RS25045 (AI2826V1_4864) | 42489..43280 | - | 792 | WP_008322208.1 | site-specific integrase | - |
| LQ176_RS25050 (AI2826V1_4865) | 43270..43584 | - | 315 | WP_008322211.1 | hypothetical protein | - |
| LQ176_RS25055 (AI2826V1_4866) | 43586..43891 | - | 306 | WP_008322213.1 | type II toxin-antitoxin system toxin CcdB | Toxin Detail |
| LQ176_RS25060 (AI2826V1_4867) | 43893..44111 | - | 219 | WP_032934863.1 | type II toxin-antitoxin system antitoxin CcdA | Antitoxin Detail |
| LQ176_RS25065 (AI2826V1_4868) | 44823..45797 | - | 975 | WP_181219984.1 | sensor domain-containing diguanylate cyclase | - |
| LQ176_RS25080 (AI2826V1_4873) | 47911..48540 | - | 630 | WP_181219980.1 | IS6 family transposase IS26 | Transposase |
| LQ176_RS25085 (AI2826V1_4874) | 48531..49043 | + | 513 | WP_230133460.1 | DM13 domain-containing protein | - |
| LQ176_RS25090 (AI2826V1_4875) | 49031..50302 | + | 1272 | WP_004357638.1 | MFS transporter | - |
| LQ176_RS25095 (AI2826V1_4876) | 50333..50734 | - | 402 | WP_004099044.1 | RidA family protein | - |
| LQ176_RS25100 (AI2826V1_4877) | 50841..51290 | - | 450 | WP_004099042.1 | hypothetical protein | - |
| LQ176_RS25105 (AI2826V1_4878) | 51378..51950 | - | 573 | WP_004099040.1 | hypothetical protein | - |
| LQ176_RS25110 (AI2826V1_4879) | 52042..53010 | - | 969 | WP_018716208.1 | magnesium and cobalt transport protein CorA | - |
| LQ176_RS25115 (AI2826V1_4880) | 53291..54295 | - | 1005 | WP_000427623.1 | IS110 family transposase IS4321R | Transposase |
| LQ176_RS25120 (AI2826V1_4881) | 54374..54931 | - | 558 | WP_003100847.1 | Tn3 family transposase TnpR_ISPa38 | Transposase |
| LQ176_RS25125 (AI2826V1_4882) | 54925..55296 | - | 372 | WP_003100853.1 | hypothetical protein | - |
| LQ176_RS25130 (AI2826V1_4883) | 55293..55793 | - | 501 | WP_003100856.1 | hypothetical protein | - |
| LQ176_RS25135 (AI2826V1_4884) | 55790..56116 | - | 327 | WP_003100858.1 | hypothetical protein | - |
| LQ176_RS25140 (AI2826V1_4885) | 56371..56727 | - | 357 | WP_000215515.1 | cupin domain-containing protein | - |
| LQ176_RS25145 (AI2826V1_4886) | 56717..57118 | - | 402 | WP_230133461.1 | DUF86 domain-containing protein | - |
| LQ176_RS25150 (AI2826V1_4887) | 57115..57405 | - | 291 | WP_001247892.1 | nucleotidyltransferase | - |
| LQ176_RS25155 (AI2826V1_4888) | 57659..58363 | - | 705 | WP_001067848.1 | IS6 family transposase IS15DI | Transposase |
| LQ176_RS25160 (AI2826V1_4889) | 58449..59471 | + | 1023 | WP_008322227.1 | helicase UvrD | - |
| LQ176_RS25165 (AI2826V1_4890) | 59724..59954 | + | 231 | WP_001261276.1 | type II toxin-antitoxin system VapB family antitoxin | Antitoxin Detail |
| LQ176_RS25170 (AI2826V1_4891) | 59951..60367 | + | 417 | WP_008322233.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| LQ176_RS25175 (AI2826V1_4892) | 60913..61833 | - | 921 | WP_008322235.1 | carbohydrate kinase | - |
| LQ176_RS25180 (AI2826V1_4893) | 61830..63170 | - | 1341 | WP_230133462.1 | hypothetical protein | - |
| LQ176_RS25185 (AI2826V1_4894) | 63228..66236 | - | 3009 | WP_001556712.1 | Tn3 family transposase ISEc63 | Transposase |
| LQ176_RS25190 (AI2826V1_4895) | 66400..66972 | + | 573 | WP_001556711.1 | Tn3 family transposase TnpR_Tn3 | Transposase |
| LQ176_RS25195 (AI2826V1_4896) | 66981..67385 | + | 405 | WP_004118313.1 | ArsA-related P-loop ATPase | - |
| LQ176_RS25200 (AI2826V1_4897) | 67416..67841 | - | 426 | WP_000065758.1 | glutaredoxin-dependent arsenate reductase | - |
| LQ176_RS25205 (AI2826V1_4898) | 67854..69143 | - | 1290 | WP_000922630.1 | arsenite efflux transporter membrane subunit ArsB | - |
| LQ176_RS25210 (AI2826V1_4899) | 69192..70943 | - | 1752 | WP_001556710.1 | arsenite efflux transporter ATPase subunit ArsA | - |
| LQ176_RS25215 (AI2826V1_4900) | 70961..71323 | - | 363 | WP_000783215.1 | arsenite efflux transporter metallochaperone ArsD | - |
| LQ176_RS25220 (AI2826V1_4901) | 71371..71724 | - | 354 | WP_001114073.1 | As(III)-sensing metalloregulatory transcriptional repressor ArsR | - |
| LQ176_RS25225 (AI2826V1_REPA000000119) | 71990..72136 | - | 147 | Protein_98 | IS1 family transposase | - |
| LQ176_RS25230 (AI2826V1_REPA000000110) | 72238..72401 | + | 164 | Protein_99 | IS1 family transposase | - |
| LQ176_RS25235 (AI2826V1_4902) | 72442..73920 | - | 1479 | WP_058670812.1 | FGGY-family carbohydrate kinase | - |
| LQ176_RS25240 (AI2826V1_4903) | 73917..74810 | - | 894 | WP_058670811.1 | L-ribulose-5-phosphate 3-epimerase | - |
| LQ176_RS25245 (AI2826V1_4904) | 74810..75856 | - | 1047 | WP_058670810.1 | ABC transporter permease | - |
| LQ176_RS25250 (AI2826V1_4905) | 75870..76856 | - | 987 | WP_058670809.1 | ABC transporter permease | - |
| LQ176_RS25255 (AI2826V1_4906) | 76849..78363 | - | 1515 | WP_058670808.1 | Xylose import ATP-binding protein XylG | VF |
| LQ176_RS25260 (AI2826V1_4907) | 78431..79435 | - | 1005 | WP_058670807.1 | substrate-binding domain-containing protein | - |
| LQ176_RS25265 (AI2826V1_4908) | 79712..80521 | - | 810 | WP_058670806.1 | DeoR/GlpR family DNA-binding transcription regulator | - |
| LQ176_RS25270 (AI2826V1_4910) | 80961..81656 | + | 696 | WP_058670805.1 | L-ribulose-5-phosphate 4-epimerase | - |
| LQ176_RS25275 (AI2826V1_REPA000000115) | 82127..82824 | + | 698 | WP_230133463.1 | IS1 family transposase | - |
| LQ176_RS25280 (AI2826V1_4913) | 83932..84180 | + | 249 | WP_127663654.1 | hypothetical protein | - |
| LQ176_RS25285 (AI2826V1_4914) | 84196..85215 | - | 1020 | WP_071687460.1 | plasmid replication initiator RepA | - |
| LQ176_RS25290 | 85208..85285 | - | 78 | WP_071687510.1 | RepA leader peptide Tap | - |
| LQ176_RS25295 (AI2826V1_4915) | 85518..85775 | - | 258 | WP_071687461.1 | replication regulatory protein RepA | - |
| LQ176_RS25300 (AI2826V1_4916) | 85906..86469 | - | 564 | WP_071687462.1 | Cardiolipin synthase B | VF |
| LQ176_RS25305 (AI2826V1_4917) | 86568..86876 | - | 309 | WP_071687463.1 | hypothetical protein | - |
| LQ176_RS25310 (AI2826V1_4918) | 86873..87583 | - | 711 | WP_181219989.1 | hypothetical protein | - |
| LQ176_RS25315 (AI2826V1_4919) | 87580..87930 | - | 351 | WP_071687465.1 | hypothetical protein | - |
| LQ176_RS25320 (AI2826V1_4921) | 88170..88898 | - | 729 | WP_071687467.1 | type-F conjugative transfer system pilin acetylase TraX | - |
| LQ176_RS25325 (AI2826V1_4922) | 88895..89461 | - | 567 | WP_071687468.1 | DUF2726 domain-containing protein | - |
| LQ176_RS25330 (AI2826V1_4923) | 89480..94780 | - | 5301 | WP_071687469.1 | Multifunctional conjugation protein TraI | Relaxase |
| LQ176_RS25335 (AI2826V1_4924) | 94780..96846 | - | 2067 | WP_127663653.1 | type IV conjugative transfer system coupling protein TraD | - |
| LQ176_RS25340 (AI2826V1_4925) | 96997..97734 | - | 738 | WP_071687471.1 | conjugal transfer complement resistance protein TraT | - |
| LQ176_RS25350 (AI2826V1_4928) | 99254..99829 | - | 576 | WP_071687472.1 | conjugal transfer protein TraS | - |
| LQ176_RS25355 (AI2826V1_4929) | 99839..102733 | - | 2895 | WP_071687473.1 | conjugal transfer mating-pair stabilization protein TraG | - |
| LQ176_RS25360 (AI2826V1_4930) | 102735..104096 | - | 1362 | WP_071687474.1 | conjugal transfer pilus assembly protein TraH | - |
| LQ176_RS25365 (AI2826V1_4931) | 104096..104707 | - | 612 | WP_071446641.1 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
| LQ176_RS25370 (AI2826V1_4932) | 104732..105508 | - | 777 | WP_071446642.1 | type-F conjugative transfer system pilin assembly protein TraF | - |
| LQ176_RS25375 (AI2826V1_4933) | 105505..107334 | - | 1830 | WP_071687475.1 | type-F conjugative transfer system mating-pair stabilization protein TraN | - |
| LQ176_RS25380 (AI2826V1_4934) | 107331..107945 | - | 615 | WP_071687476.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| LQ176_RS25385 (AI2826V1_4935) | 107964..108959 | - | 996 | WP_071687477.1 | conjugal transfer pilus assembly protein TraU | - |
| LQ176_RS25390 (AI2826V1_4936) | 108956..109591 | - | 636 | WP_071687478.1 | type-F conjugative transfer system protein TraW | - |
| LQ176_RS25395 (AI2826V1_4937) | 109591..110055 | - | 465 | WP_071687479.1 | type-F conjugative transfer system protein TrbI | - |
| LQ176_RS25400 (AI2826V1_4938) | 110052..112643 | - | 2592 | WP_081365520.1 | type IV secretion system protein TraC | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|