MGE detailed information
MGE type: Conjugative plasmid MGE length: 149443 bp
Accession: NZ_OW849529 Location: 1..149443 Organism: Citrobacter freundii isolate 22 Replicon: plasmid P2
Accession: NZ_OW849529 Location: 1..149443 Organism: Citrobacter freundii isolate 22 Replicon: plasmid P2
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LQ181_RS26445 (AI2661V1_5147) | 1..942 | + | 942 | WP_165690017.1 | plasmid replication initiator RepA | - |
| LQ181_RS26450 (AI2661V1_5149) | 2400..3422 | - | 1023 | WP_045899963.1 | IS110 family transposase ISSm1 | Transposase |
| LQ181_RS26455 (AI2661V1_5150) | 3758..4417 | + | 660 | WP_001567320.1 | Tn3 family transposase TnpR_TnEc1 | Transposase |
| LQ181_RS26460 (AI2661V1_5152) | 5141..5791 | + | 651 | WP_001567322.1 | type II CAAX endopeptidase family protein | - |
| LQ181_RS26465 (AI2661V1_5153) | 5794..7047 | + | 1254 | WP_001567323.1 | HlyD family efflux transporter periplasmic adaptor subunit | - |
| LQ181_RS26470 (AI2661V1_5154) | 7047..9206 | + | 2160 | WP_022652277.1 | peptidase domain-containing ABC transporter | - |
| LQ181_RS26475 (AI2661V1_5155) | 9221..9802 | - | 582 | Protein_6 | Tn3 family transposase ISEc63 | Transposase |
| LQ181_RS26480 (AI2661V1_5156) | 9867..10571 | + | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| LQ181_RS26485 | 10640..10921 | + | 282 | Protein_8 | transposase | - |
| LQ181_RS26490 (AI2661V1_5157) | 11330..12805 | - | 1476 | WP_020324153.1 | SEC-C metal-binding domain-containing protein | - |
| LQ181_RS26495 | 13666..13866 | - | 201 | Protein_10 | MerR family transcriptional regulator | - |
| LQ181_RS26500 (AI2661V1_5158) | 13882..16110 | - | 2229 | Protein_11 | Tn3 family transposase TnpA_Tn5403 | Transposase |
| LQ181_RS26505 (AI2661V1_5159) | 16181..17161 | + | 981 | WP_220131381.1 | IS5 family transposase IS5D | Transposase |
| LQ181_RS26510 | 17307..17426 | + | 120 | Protein_13 | plasmid partition protein ParG | - |
| LQ181_RS26515 (AI2661V1_5160) | 17442..17950 | - | 509 | Protein_14 | IS1 family transposase IS1R | Transposase |
| LQ181_RS26520 (AI2661V1_5161) | 18173..18859 | + | 687 | WP_041205587.1 | nucleoside recognition domain-containing protein | - |
| LQ181_RS26525 (AI2661V1_5162) | 18856..19317 | + | 462 | WP_005326786.1 | YjiG family protein | - |
| LQ181_RS26530 (AI2661V1_5163) | 19330..20496 | + | 1167 | WP_059593932.1 | Isoaspartyl dipeptidase | VF |
| LQ181_RS26535 (AI2661V1_5165) | 21030..21734 | - | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| LQ181_RS26540 (AI2661V1_5166) | 21799..24342 | + | 2544 | Protein_19 | Tn3 family transposase ISEc63 | Transposase |
| LQ181_RS26545 (AI2661V1_5167) | 24631..24987 | - | 357 | WP_000215515.1 | cupin domain-containing protein | - |
| LQ181_RS26550 (AI2661V1_REPA000000114) | 25382..26067 | - | 686 | Protein_21 | IS6 family transposase IS15DI | Transposase |
| LQ181_RS26555 (AI2661V1_5170) | 26138..26473 | + | 336 | WP_001172026.1 | helix-turn-helix transcriptional regulator | - |
| LQ181_RS26560 (AI2661V1_5171) | 26488..26823 | + | 336 | WP_000741275.1 | hypothetical protein | - |
| LQ181_RS26565 (AI2661V1_5172) | 26847..27173 | + | 327 | WP_000091614.1 | hypothetical protein | - |
| LQ181_RS26570 | 27170..27550 | + | 381 | Protein_25 | hypothetical protein | - |
| LQ181_RS27655 | 27707..27961 | + | 255 | WP_230138381.1 | DUF3391 domain-containing protein | - |
| LQ181_RS26575 (AI2661V1_5174) | 27996..28922 | + | 927 | WP_227506525.1 | HD-GYP domain-containing protein | - |
| LQ181_RS26580 (AI2661V1_5175) | 29072..30103 | - | 1032 | WP_001809438.1 | IS630 family transposase ISAhy2 | Transposase |
| LQ181_RS26585 | 30366..30644 | + | 279 | WP_010465808.1 | Tn3 family transposase TnpR_ISThsp9 | Transposase |
| LQ181_RS26590 (AI2661V1_REPA000000132) | 30685..31380 | + | 696 | Protein_30 | IS5 family transposase ISKpn26 | Transposase |
| LQ181_RS26595 (AI2661V1_5178) | 31697..32197 | - | 501 | WP_001752509.1 | non-heme ferritin-like protein | - |
| LQ181_RS26600 (AI2661V1_5179) | 32524..33228 | - | 705 | WP_157705156.1 | IS6 family transposase IS26 | Transposase |
| LQ181_RS26605 (AI2661V1_5181) | 33945..35366 | - | 1422 | WP_110129319.1 | MFS transporter | - |
| LQ181_RS26610 (AI2661V1_5182) | 35483..36661 | - | 1179 | WP_110129318.1 | M20 aminoacylase family protein | - |
| LQ181_RS26615 (AI2661V1_5183) | 36857..39154 | + | 2298 | WP_230138376.1 | helix-turn-helix domain-containing protein | - |
| LQ181_RS26620 (AI2661V1_5184) | 39398..42406 | - | 3009 | WP_115074994.1 | Tn3 family transposase ISEc63 | Transposase |
| LQ181_RS26625 (AI2661V1_5185) | 42570..43142 | + | 573 | WP_001556711.1 | Tn3 family transposase TnpR_Tn3 | Transposase |
| LQ181_RS26630 (AI2661V1_5186) | 43181..43555 | + | 375 | WP_000110555.1 | ArsA-related P-loop ATPase | - |
| LQ181_RS26635 (AI2661V1_5187) | 43586..44011 | - | 426 | WP_000065758.1 | glutaredoxin-dependent arsenate reductase | - |
| LQ181_RS26640 (AI2661V1_5188) | 44024..45313 | - | 1290 | WP_000922630.1 | arsenite efflux transporter membrane subunit ArsB | - |
| LQ181_RS26645 (AI2661V1_5189) | 45362..47113 | - | 1752 | WP_001556710.1 | arsenite efflux transporter ATPase subunit ArsA | - |
| LQ181_RS26650 (AI2661V1_5190) | 47131..47493 | - | 363 | WP_000783215.1 | arsenite efflux transporter metallochaperone ArsD | - |
| LQ181_RS26655 (AI2661V1_5191) | 47541..47894 | - | 354 | WP_001114073.1 | As(III)-sensing metalloregulatory transcriptional repressor ArsR | - |
| LQ181_RS26660 (AI2661V1_5192) | 48169..49083 | - | 915 | Protein_44 | Tn3 family transposase TnpA_TnAs1 | Transposase |
| LQ181_RS26665 | 49087..49479 | + | 393 | WP_001351729.1 | isochorismatase family cysteine hydrolase | - |
| LQ181_RS26670 (AI2661V1_5193) | 49617..50501 | + | 885 | WP_000058717.1 | EamA family transporter | - |
| LQ181_RS26675 (AI2661V1_5194) | 50533..51732 | - | 1200 | WP_000804064.1 | Tetracycline resistance protein, class C | ARG |
| LQ181_RS26680 (AI2661V1_5195) | 51838..52488 | + | 651 | WP_000164043.1 | tetracycline resistance transcriptional repressor TetR(A) | - |
| LQ181_RS26685 (AI2661V1_5196) | 52520..52762 | - | 243 | WP_000844627.1 | transposase | - |
| LQ181_RS26690 (AI2661V1_5197) | 52820..55786 | - | 2967 | WP_001138014.1 | Tn3 family transposase TnpA_TnAs1 | Transposase |
| LQ181_RS26695 (AI2661V1_5198) | 55790..56350 | - | 561 | WP_001161490.1 | Tn3 family transposase TnpR_TnAs1 | Transposase |
| LQ181_RS26700 (AI2661V1_5199) | 56526..56738 | - | 213 | WP_000993245.1 | DUF3330 domain-containing protein | - |
| LQ181_RS26705 (AI2661V1_5200) | 56804..57040 | - | 237 | WP_001087807.1 | broad-spectrum mercury transporter MerE | - |
| LQ181_RS26710 (AI2661V1_5201) | 57037..57402 | - | 366 | WP_001277466.1 | mercury resistance co-regulator MerD | - |
| LQ181_RS26715 (AI2661V1_5202) | 57420..59105 | - | 1686 | WP_000209296.1 | mercury(II) reductase | - |
| LQ181_RS26720 (AI2661V1_5203) | 59144..59569 | - | 426 | WP_000522996.1 | organomercurial transporter MerC | - |
| LQ181_RS26725 (AI2661V1_5204) | 59597..59872 | - | 276 | WP_000732275.1 | mercury resistance system periplasmic binding protein MerP | - |
| LQ181_RS26730 (AI2661V1_5205) | 59888..60238 | - | 351 | WP_031623830.1 | mercuric ion transporter MerT | - |
| LQ181_RS26735 (AI2661V1_5206) | 60310..60765 | + | 456 | WP_001166628.1 | IS607 family transposase ISChh1 | Transposase |
| LQ181_RS26740 (AI2661V1_5207) | 60859..61842 | - | 984 | WP_022652268.1 | tyrosine-type recombinase/integrase | - |
| LQ181_RS26745 (AI2661V1_5208) | 62031..62858 | + | 828 | WP_022652267.1 | hypothetical protein | - |
| LQ181_RS26750 | 63004..63411 | + | 408 | WP_224776060.1 | hypothetical protein | - |
| LQ181_RS26755 (AI2661V1_5210) | 63408..64556 | + | 1149 | WP_230138377.1 | hypothetical protein | - |
| LQ181_RS26765 (AI2661V1_5213) | 65865..66671 | - | 807 | WP_165473012.1 | SecC motif-containing protein | - |
| LQ181_RS26770 (AI2661V1_5214) | 66680..67120 | - | 441 | WP_059509659.1 | hypothetical protein | - |
| LQ181_RS26775 (AI2661V1_5216) | 67352..68713 | - | 1362 | WP_059509657.1 | FRG domain-containing protein | - |
| LQ181_RS26780 (AI2661V1_5217) | 68727..69530 | - | 804 | WP_059509655.1 | tetratricopeptide repeat protein | - |
| LQ181_RS26785 (AI2661V1_5218) | 69591..70937 | - | 1347 | WP_080400673.1 | ISNCY family transposase ISLad2 | Transposase |
| LQ181_RS26790 (AI2661V1_5219) | 71164..71796 | + | 633 | WP_001567369.1 | hypothetical protein | - |
| LQ181_RS26795 (AI2661V1_5220) | 71825..73228 | - | 1404 | WP_001567368.1 | ISNCY family transposase ISKpn21 | Transposase |
| LQ181_RS26800 (AI2661V1_5221) | 73429..73911 | - | 483 | WP_003026803.1 | GNAT family N-acetyltransferase | Toxin Detail |
| LQ181_RS26805 (AI2661V1_5222) | 73899..74165 | - | 267 | WP_003026799.1 | DUF1778 domain-containing protein | Antitoxin Detail |
| LQ181_RS26810 (AI2661V1_5223) | 74610..74840 | - | 231 | WP_023307222.1 | hypothetical protein | - |
| LQ181_RS26815 (AI2661V1_5224) | 74854..75057 | - | 204 | WP_004213596.1 | HHA domain-containing protein | - |
| LQ181_RS26820 (AI2661V1_5225) | 75302..76270 | + | 969 | WP_023307223.1 | IS5 family transposase IS903B | Transposase |
| LQ181_RS26825 | 76391..76459 | + | 69 | Protein_77 | serine/threonine protein kinase | - |
| LQ181_RS26830 (AI2661V1_5226) | 76634..77374 | + | 741 | WP_022652310.1 | site-specific integrase | - |
| LQ181_RS26835 (AI2661V1_5227) | 77700..78689 | - | 990 | WP_022652311.1 | RepB family plasmid replication initiator protein | - |
| LQ181_RS26840 (AI2661V1_5228) | 79545..79814 | + | 270 | WP_022652312.1 | DUF1778 domain-containing protein | Antitoxin Detail |
| LQ181_RS26845 (AI2661V1_5229) | 79818..80348 | + | 531 | WP_022652313.1 | GNAT family N-acetyltransferase | Toxin Detail |
| LQ181_RS26850 (AI2661V1_5230) | 80516..81373 | + | 858 | WP_022652314.1 | IS5 family transposase IS5D | Transposase |
| LQ181_RS26855 (AI2661V1_REPA000000146) | 81514..82407 | - | 894 | Protein_83 | IS3 family transposase ISEhe3 | Transposase |
| LQ181_RS26860 (AI2661V1_5232) | 82475..83626 | + | 1152 | WP_022652315.1 | IS30 family transposase IS30D | Transposase |
| LQ181_RS26865 (AI2661V1_5234) | 84115..84462 | + | 348 | WP_000609174.1 | IS66 family transposase ISCfr14 | Transposase |
| LQ181_RS26870 (AI2661V1_5235) | 84512..86047 | + | 1536 | WP_001000409.1 | IS66 family transposase ISSgsp1 | Transposase |
| LQ181_RS26875 (AI2661V1_5236) | 86104..87444 | - | 1341 | WP_008786676.1 | IS110 family transposase ISWpi13 | Transposase |
| LQ181_RS26880 (AI2661V1_5237) | 87675..87917 | - | 243 | Protein_88 | IS3 family transposase ISEhe3 | Transposase |
| LQ181_RS26885 (AI2661V1_5238) | 88288..89454 | + | 1167 | WP_022652317.1 | plasmid-partitioning protein SopA | - |
| LQ181_RS26890 (AI2661V1_5239) | 89454..90419 | + | 966 | WP_022652318.1 | ParB/RepB/Spo0J family plasmid partition protein | - |
| LQ181_RS26895 | 91152..92194 | - | 1043 | Protein_91 | translesion error-prone DNA polymerase V subunit UmuC | - |
| LQ181_RS26900 (AI2661V1_5242) | 92448..94586 | + | 2139 | WP_022652236.1 | hypothetical protein | - |
| LQ181_RS26905 (AI2661V1_5243) | 94890..96323 | + | 1434 | WP_022652237.1 | DNA cytosine methyltransferase | - |
| LQ181_RS26910 (AI2661V1_5244) | 96357..97571 | - | 1215 | WP_022652238.1 | type II site-specific deoxyribonuclease | - |
| LQ181_RS26915 (AI2661V1_5245) | 97720..99846 | - | 2127 | WP_022652239.1 | tyrosine-type recombinase/integrase | - |
| LQ181_RS26920 (AI2661V1_5247) | 99830..100834 | - | 1005 | Protein_96 | tyrosine-type recombinase/integrase | - |
| LQ181_RS26925 (AI2661V1_5248) | 100908..101135 | - | 228 | Protein_97 | DNA polymerase V subunit UmuC | - |
| LQ181_RS26930 (AI2661V1_5249) | 101135..101557 | - | 423 | WP_022652242.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| LQ181_RS26935 (AI2661V1_5250) | 101737..102408 | - | 672 | WP_022652243.1 | SOS response-associated peptidase family protein | - |
| LQ181_RS26940 (AI2661V1_5251) | 102768..103445 | + | 678 | WP_022652244.1 | DNA methylase | - |
| LQ181_RS26945 (AI2661V1_5252) | 103445..103666 | + | 222 | WP_022652245.1 | hypothetical protein | - |
| LQ181_RS26950 (AI2661V1_5253) | 103677..104096 | + | 420 | WP_016479994.1 | DUF1380 family protein | - |
| LQ181_RS26955 (AI2661V1_5254) | 104150..104929 | + | 780 | WP_230138378.1 | hypothetical protein | - |
| LQ181_RS26960 (AI2661V1_5255) | 105336..105842 | + | 507 | WP_015062672.1 | antirestriction protein ArdA | - |
| LQ181_RS26965 (AI2661V1_5256) | 105885..106076 | + | 192 | WP_022652248.1 | hypothetical protein | - |
| LQ181_RS26970 (AI2661V1_5257) | 106268..106522 | + | 255 | WP_072200699.1 | DNA polymerase III subunit theta | - |
| LQ181_RS26975 (AI2661V1_5258) | 106557..106874 | + | 318 | WP_032430831.1 | hypothetical protein | - |
| LQ181_RS26980 | 106997..107218 | - | 222 | WP_015062665.1 | hypothetical protein | - |
| LQ181_RS26985 (AI2661V1_5259) | 107549..108103 | + | 555 | WP_020842505.1 | single-stranded DNA-binding protein | - |
| LQ181_RS26990 (AI2661V1_5260) | 108156..108398 | + | 243 | WP_032430848.1 | DUF905 domain-containing protein | - |
| LQ181_RS26995 (AI2661V1_5261) | 108469..110502 | + | 2034 | Protein_111 | ParB/RepB/Spo0J family partition protein | - |
| LQ181_RS27000 (AI2661V1_5263) | 110543..110977 | + | 435 | WP_086538015.1 | conjugation system SOS inhibitor PsiB | - |
| LQ181_RS27005 (AI2661V1_5264) | 110974..111702 | + | 729 | WP_032430829.1 | plasmid SOS inhibition protein A | - |
| LQ181_RS27010 (AI2661V1_5265) | 111699..112052 | + | 354 | WP_020833567.1 | hypothetical protein | - |
| LQ181_RS27015 (AI2661V1_5267) | 112406..112780 | + | 375 | WP_020833566.1 | hypothetical protein | - |
| LQ181_RS27020 (AI2661V1_5268) | 113503..113910 | + | 408 | WP_223290845.1 | ammonia monooxygenase | - |
| LQ181_RS27025 (AI2661V1_5269) | 113967..114314 | + | 348 | WP_032430827.1 | hypothetical protein | - |
| LQ181_RS27030 (AI2661V1_5270) | 114409..114555 | + | 147 | WP_001159045.1 | hypothetical protein | - |
| LQ181_RS27035 (AI2661V1_5271) | 114602..115435 | + | 834 | WP_032430826.1 | N-6 DNA methylase | - |
| LQ181_RS27040 (AI2661V1_5272) | 116026..116612 | + | 587 | Protein_120 | antirestriction protein | - |
| LQ181_RS27045 (AI2661V1_5273) | 116623..117078 | - | 456 | WP_032430824.1 | hypothetical protein | VF |
| LQ181_RS27050 (AI2661V1_5274) | 117547..117930 | + | 384 | WP_015062650.1 | conjugal transfer relaxosome DNA-binding protein TraM | - |
| LQ181_RS27055 (AI2661V1_5275) | 118227..118676 | + | 450 | WP_020833561.1 | helix-turn-helix domain-containing protein | - |
| LQ181_RS27060 (AI2661V1_5276) | 118882..119115 | + | 234 | WP_032430823.1 | TraY domain-containing protein | - |
| LQ181_RS27065 (AI2661V1_5277) | 119233..119592 | + | 360 | WP_032430822.1 | type IV conjugative transfer system pilin TraA | - |
| LQ181_RS27070 (AI2661V1_5278) | 119594..119899 | + | 306 | WP_000398849.1 | type IV conjugative transfer system protein TraL | - |
| LQ181_RS27075 (AI2661V1_5279) | 119919..120482 | + | 564 | WP_032430821.1 | type IV conjugative transfer system protein TraE | - |
| LQ181_RS27080 (AI2661V1_5280) | 120472..121212 | + | 741 | WP_032430820.1 | type-F conjugative transfer system secretin TraK | - |
| LQ181_RS27085 (AI2661V1_5281) | 121199..122560 | + | 1362 | WP_032430819.1 | F-type conjugal transfer pilus assembly protein TraB | - |
| LQ181_RS27090 | 122803..122889 | + | 87 | WP_223290847.1 | hypothetical protein | - |
| LQ181_RS27095 (AI2661V1_5282) | 122902..123354 | + | 453 | WP_032430818.1 | hypothetical protein | - |
| LQ181_RS27100 (AI2661V1_5283) | 123372..123971 | + | 600 | WP_047715683.1 | type IV conjugative transfer system lipoprotein TraV | - |
| LQ181_RS27105 (AI2661V1_5284) | 123982..126573 | + | 2592 | WP_032430816.1 | type IV secretion system protein TraC | - |
| LQ181_RS27110 (AI2661V1_5285) | 126570..127034 | + | 465 | WP_032430815.1 | type-F conjugative transfer system protein TrbI | - |
| LQ181_RS27115 (AI2661V1_5286) | 127034..127669 | + | 636 | WP_032430814.1 | type-F conjugative transfer system protein TraW | - |
| LQ181_RS27120 (AI2661V1_5287) | 127666..128661 | + | 996 | WP_032430813.1 | conjugal transfer pilus assembly protein TraU | - |
| LQ181_RS27125 (AI2661V1_5288) | 128672..129040 | + | 369 | WP_032430812.1 | hypothetical protein | - |
| LQ181_RS27130 (AI2661V1_5289) | 129037..129651 | + | 615 | WP_032430811.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| LQ181_RS27135 (AI2661V1_5290) | 129648..131501 | + | 1854 | WP_032430810.1 | type-F conjugative transfer system mating-pair stabilization protein TraN | - |
| LQ181_RS27140 (AI2661V1_5291) | 131498..132277 | + | 780 | WP_032430809.1 | type-F conjugative transfer system pilin assembly protein TraF | - |
| LQ181_RS27145 (AI2661V1_5292) | 132303..132914 | + | 612 | WP_032430808.1 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
| LQ181_RS27150 (AI2661V1_5293) | 132914..134275 | + | 1362 | WP_032430807.1 | conjugal transfer pilus assembly protein TraH | - |
| LQ181_RS27155 (AI2661V1_5294) | 134277..137174 | + | 2898 | WP_047715678.1 | conjugal transfer mating-pair stabilization protein TraG | - |
| LQ181_RS27160 (AI2661V1_5295) | 137186..137746 | + | 561 | WP_230138379.1 | protein traS | - |
| LQ181_RS27165 (AI2661V1_5296) | 137922..138659 | + | 738 | WP_047715675.1 | conjugal transfer complement resistance protein TraT | - |
| LQ181_RS27170 (AI2661V1_5297) | 138810..141044 | + | 2235 | WP_047715674.1 | type IV conjugative transfer system coupling protein TraD | - |
| LQ181_RS27175 (AI2661V1_5298) | 141044..146347 | + | 5304 | WP_230138380.1 | Multifunctional conjugation protein TraI | Relaxase |
| LQ181_RS27180 (AI2661V1_5299) | 146366..146932 | + | 567 | WP_047715672.1 | DUF2726 domain-containing protein | - |
| LQ181_RS27185 (AI2661V1_5300) | 146929..147660 | + | 732 | WP_047715671.1 | type-F conjugative transfer system pilin acetylase TraX | - |
| LQ181_RS27190 (AI2661V1_5301) | 147702..148055 | + | 354 | WP_047715670.1 | hypothetical protein | - |
| LQ181_RS27195 (AI2661V1_5302) | 148204..148767 | + | 564 | WP_047715669.1 | Cardiolipin synthase A | VF |
| LQ181_RS27200 (AI2661V1_5303) | 148899..149141 | + | 243 | WP_000078032.1 | replication regulatory protein RepA | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|