MGE detailed information
MGE type: IScluster/Tn MGE length: 34361 bp
Accession: NZ_OW849083 Location: 78669..113029 Organism: Citrobacter freundii isolate 8 Replicon: plasmid P1
Accession: NZ_OW849083 Location: 78669..113029 Organism: Citrobacter freundii isolate 8 Replicon: plasmid P1
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LQ154_RS25845 (AI2642V1_5047) | 75092..75508 | - | 417 | WP_008322222.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| LQ154_RS25850 (AI2642V1_5048) | 75505..75735 | - | 231 | WP_008322219.1 | type II toxin-antitoxin system VapB family antitoxin | Antitoxin Detail |
| LQ154_RS25855 | 75859..75984 | + | 126 | Protein_88 | hypothetical protein | - |
| LQ154_RS25860 (AI2642V1_5049) | 76108..76368 | + | 261 | WP_040219223.1 | type II toxin-antitoxin system ParD family antitoxin | - |
| LQ154_RS25865 (AI2642V1_5050) | 76355..76651 | + | 297 | WP_081364705.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| LQ154_RS25870 (AI2642V1_5051) | 76883..77317 | - | 435 | WP_004152085.1 | copper resistance system metallochaperone PcoE | - |
| LQ154_RS25875 (AI2642V1_5052) | 77534..78622 | - | 1089 | Protein_92 | copper resistance membrane spanning protein PcoS | - |
| LQ154_RS25880 (AI2642V1_5053) | 78669..78923 | + | 255 | Protein_93 | IS1 family transposase IS1R | Transposase |
| LQ154_RS25885 (AI2642V1_5054) | 78961..80499 | - | 1539 | WP_004201219.1 | IS66 family transposase ISKpn24 | Transposase |
| LQ154_RS25890 (AI2642V1_5055) | 80548..80895 | - | 348 | WP_021563201.1 | IS66 family transposase ISKpn24 | Transposase |
| LQ154_RS25895 (AI2642V1_5056) | 80892..81296 | - | 405 | WP_003031976.1 | IS66 family transposase ISKpn24 | Transposase |
| LQ154_RS25900 (AI2642V1_REPA000000123) | 81382..81828 | + | 447 | Protein_97 | IS1 family transposase IS1G | Transposase |
| LQ154_RS25905 (AI2642V1_5058) | 82048..82839 | + | 792 | WP_230129897.1 | EAL domain-containing protein | - |
| LQ154_RS25910 (AI2642V1_5059) | 82873..83577 | - | 705 | WP_016162063.1 | IS6 family transposase IS26 | Transposase |
| LQ154_RS25915 (AI2642V1_5060) | 83685..84263 | - | 579 | WP_071446801.1 | Tn3 family transposase TnpR_ISYps3 | Transposase |
| LQ154_RS25920 (AI2642V1_5061) | 84423..87407 | + | 2985 | WP_071446802.1 | Tn3 family transposase TnpA_ISSba14 | Transposase |
| LQ154_RS25925 (AI2642V1_5062) | 87486..88490 | + | 1005 | WP_000427614.1 | IS110 family transposase IS5075 | Transposase |
| LQ154_RS25930 (AI2642V1_5063) | 88771..89739 | + | 969 | WP_018716208.1 | magnesium and cobalt transport protein CorA | - |
| LQ154_RS25935 (AI2642V1_5064) | 89831..90403 | + | 573 | WP_004099040.1 | hypothetical protein | - |
| LQ154_RS25940 (AI2642V1_5065) | 90491..90940 | + | 450 | WP_004099042.1 | hypothetical protein | - |
| LQ154_RS25945 (AI2642V1_5066) | 91047..91448 | + | 402 | WP_004099044.1 | RidA family protein | - |
| LQ154_RS25950 (AI2642V1_5067) | 91479..92450 | - | 972 | WP_230129899.1 | MFS transporter | - |
| LQ154_RS25955 (AI2642V1_5068) | 92526..93230 | - | 705 | WP_016162063.1 | IS6 family transposase IS26 | Transposase |
| LQ154_RS25960 (AI2642V1_5069) | 93340..94848 | - | 1509 | WP_001189111.1 | group II intron reverse transcriptase/maturase | - |
| LQ154_RS25965 (AI2642V1_REPA000000157) | 95521..95946 | - | 426 | Protein_110 | IS3 family transposase | - |
| LQ154_RS25970 (AI2642V1_5071) | 95956..97107 | - | 1152 | WP_064562008.1 | IS30 family transposase IS30H | Transposase |
| LQ154_RS25975 (AI2642V1_5072) | 97175..97432 | - | 258 | Protein_112 | IS3 family transposase ISEc52 | Transposase |
| LQ154_RS25980 (AI2642V1_REPA000000170) | 97510..97650 | + | 141 | Protein_113 | transposase | - |
| LQ154_RS25985 (AI2642V1_5073) | 97881..99221 | + | 1341 | WP_008786676.1 | IS110 family transposase ISWpi13 | Transposase |
| LQ154_RS25990 (AI2642V1_5074) | 99253..100404 | - | 1152 | WP_022652315.1 | IS30 family transposase IS30D | Transposase |
| LQ154_RS25995 (AI2642V1_REPA000000167) | 100469..100897 | + | 429 | Protein_116 | IS3 family transposase ISEhe3 | Transposase |
| LQ154_RS26000 (AI2642V1_5075) | 101570..103078 | + | 1509 | WP_001189111.1 | group II intron reverse transcriptase/maturase | - |
| LQ154_RS26005 (AI2642V1_REPA000000169) | 103159..103635 | + | 477 | Protein_118 | IS3 family transposase ISEhe3 | Transposase |
| LQ154_RS26010 (AI2642V1_REPA000000147) | 103776..103934 | - | 159 | Protein_119 | IS5/IS1182 family transposase | - |
| LQ154_RS26015 (AI2642V1_5077) | 104027..105526 | + | 1500 | WP_071444479.1 | IS21 family transposase ISEc10 | Transposase |
| LQ154_RS26020 (AI2642V1_5078) | 105523..106287 | + | 765 | WP_071444478.1 | IS21 family transposase ISEc10 | Transposase |
| LQ154_RS26025 (AI2642V1_5079) | 106345..107049 | - | 705 | Protein_122 | IS5 family transposase IS5B | Transposase |
| LQ154_RS26030 (AI2642V1_5080) | 107217..107747 | - | 531 | WP_022652313.1 | GNAT family N-acetyltransferase | Toxin Detail |
| LQ154_RS26035 (AI2642V1_5081) | 107751..108020 | - | 270 | WP_022652312.1 | DUF1778 domain-containing protein | Antitoxin Detail |
| LQ154_RS26040 (AI2642V1_5082) | 108876..109865 | + | 990 | WP_022652311.1 | RepB family plasmid replication initiator protein | - |
| LQ154_RS26045 (AI2642V1_5083) | 110191..110931 | - | 741 | WP_230129906.1 | site-specific integrase | - |
| LQ154_RS26050 (AI2642V1_REPA000000125) | 111408..111715 | + | 308 | Protein_127 | IS1-like element transposase | - |
| LQ154_RS26055 (AI2642V1_5084) | 112007..113029 | - | 1023 | WP_001572362.1 | IS110 family transposase IS1618 | Transposase |
| LQ154_RS26060 (AI2642V1_5085) | 113536..115014 | + | 1479 | WP_022652309.1 | SulP family inorganic anion transporter | - |
| LQ154_RS26065 (AI2642V1_5086) | 115032..115859 | + | 828 | WP_032430841.1 | universal stress protein | - |
| LQ154_RS26070 (AI2642V1_5087) | 115941..116144 | + | 204 | WP_021314636.1 | hypothetical protein | - |
| LQ154_RS26075 (AI2642V1_5088) | 116422..116652 | - | 231 | WP_021314637.1 | thioredoxin family protein | - |
| LQ154_RS26080 (AI2642V1_5089) | 116666..117634 | - | 969 | WP_225986354.1 | permease | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|