MGE detailed information
MGE type: Genomic_island MGE length: 61466 bp
Accession: NZ_OW848980 Location: 4305332..4366797 Organism: Escherichia coli isolate 23 Replicon: chromosome
Accession: NZ_OW848980 Location: 4305332..4366797 Organism: Escherichia coli isolate 23 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LQ157_RS21050 (4300808) | 4300808..4301146 | + | 339 | WP_000883400.1 | divalent cation tolerance protein CutA | - |
| LQ157_RS21055 (4301122) | 4301122..4302819 | + | 1698 | WP_000068978.1 | protein-disulfide reductase DsbD | - |
| LQ157_RS21060 (4302856) | 4302856..4303431 | + | 576 | WP_001188520.1 | transcriptional regulator | - |
| LQ157_RS21070 (4303811) | 4303811..4305076 | + | 1266 | WP_001218795.1 | integrase arm-type DNA-binding domain-containing protein | - |
| LQ157_RS21075 (4305332) | 4305332..4306375 | + | 1044 | WP_000147019.1 | hypothetical protein | - |
| LQ157_RS21080 (4306735) | 4306735..4308237 | - | 1503 | WP_001347203.1 | phosphoethanolamine transferase | - |
| LQ157_RS21085 (4308419) | 4308419..4309159 | - | 741 | WP_001045031.1 | outer membrane beta-barrel protein | - |
| LQ157_RS21090 (4309377) | 4309377..4309745 | - | 369 | WP_001275823.1 | hypothetical protein | - |
| LQ157_RS21095 (4310479) | 4310479..4310858 | + | 380 | Protein_4139 | GTP-binding protein | - |
| LQ157_RS21100 (4311111) | 4311111..4311348 | - | 238 | Protein_4140 | IS21 family transposase ISSso4 | Transposase |
| LQ157_RS21105 (4311654) | 4311654..4311995 | + | 342 | WP_001049879.1 | FxLYD domain-containing protein | - |
| LQ157_RS21110 (4312299) | 4312299..4313258 | + | 960 | Protein_4142 | IS21 family transposase ISEc12 | Transposase |
| LQ157_RS21115 (4313610) | 4313610..4314161 | - | 552 | WP_001445604.1 | Transcriptional repressor MprA | VF |
| LQ157_RS21125 (4315757) | 4315757..4316008 | - | 252 | Protein_4145 | IS3 family transposase ISSfl10 | Transposase |
| LQ157_RS21130 (4316127) | 4316127..4317179 | - | 1053 | WP_230132629.1 | PapG chaperone-binding domain-containing protein | - |
| LQ157_RS21135 (4317282) | 4317282..4317782 | - | 501 | WP_000620428.1 | Minor fimbrial protein PrsF | VF |
| LQ157_RS21140 (4317858) | 4317858..4318385 | - | 528 | WP_000720140.1 | Fimbrial protein PapE | VF |
| LQ157_RS21145 (4318412) | 4318412..4318948 | - | 537 | WP_000597715.1 | Fimbrial adapter PapK | VF |
| LQ157_RS21150 (4318958) | 4318958..4319539 | - | 582 | WP_000261302.1 | hypothetical protein | VF |
| LQ157_RS21155 (4319576) | 4319576..4320295 | - | 720 | WP_001363619.1 | Chaperone protein PapD | VF |
| LQ157_RS21160 (4320381) | 4320381..4322891 | - | 2511 | WP_001318123.1 | Outer membrane usher protein PapC | VF |
| LQ157_RS21165 (4322949) | 4322949..4323509 | - | 561 | WP_000274057.1 | PAP fimbrial minor pilin protein | VF |
| LQ157_RS21170 (4323599) | 4323599..4324150 | - | 552 | WP_021526048.1 | Pap fimbrial major pilin protein | VF |
| LQ157_RS21175 (4324356) | 4324356..4324670 | - | 315 | WP_000930064.1 | Major pilu subunit operon regulatory protein PapB | VF |
| LQ157_RS21180 (4325074) | 4325074..4325307 | + | 234 | WP_000006211.1 | P fimbrial regulatory protein KS71A | VF |
| LQ157_RS21185 (4325771) | 4325771..4326080 | - | 310 | Protein_4157 | integrase core domain-containing protein | - |
| LQ157_RS21190 (4326097) | 4326097..4327173 | - | 1077 | WP_024177929.1 | IS110 family transposase ISEc21 | Transposase |
| LQ157_RS21195 (4327455) | 4327455..4327634 | - | 180 | Protein_4159 | IS3 family transposase | - |
| LQ157_RS21200 (4327715) | 4327715..4329223 | - | 1509 | WP_001189123.1 | group II intron reverse transcriptase/maturase | - |
| LQ157_RS21205 (4329896) | 4329896..4330321 | - | 426 | Protein_4161 | IS3 family transposase | - |
| LQ157_RS21210 (4330330) | 4330330..4331271 | + | 942 | Protein_4162 | IS3 family transposase ISSd1 | Transposase |
| LQ157_RS21215 (4331228) | 4331228..4331731 | + | 504 | WP_000261583.1 | ProQ/FinO family protein | - |
| LQ157_RS21220 (4331750) | 4331750..4332298 | - | 549 | WP_001167424.1 | hypothetical protein | - |
| LQ157_RS21225 (4332756) | 4332756..4333214 | + | 459 | WP_021513224.1 | hypothetical protein | - |
| LQ157_RS21230 (4333314) | 4333314..4334000 | + | 687 | WP_000406622.1 | type II CAAX endopeptidase family protein | - |
| LQ157_RS21235 (4334175) | 4334175..4334453 | - | 279 | WP_071526565.1 | microcin McmA | - |
| LQ157_RS21240 (4334706) | 4334706..4334996 | - | 291 | Protein_4168 | ATP-binding cassette domain-containing protein | - |
| LQ157_RS21245 (4335286) | 4335286..4335519 | - | 234 | WP_000958500.1 | AlpA family transcriptional regulator | - |
| LQ157_RS21250 (4335588) | 4335588..4336160 | - | 573 | WP_021525981.1 | hypothetical protein | - |
| LQ157_RS21255 (4336407) | 4336407..4336974 | - | 568 | Protein_4171 | inovirus-type Gp2 protein | - |
| LQ157_RS21260 (4338325) | 4338325..4339149 | - | 825 | WP_001082114.1 | hypothetical protein | - |
| LQ157_RS21265 (4339616) | 4339616..4340152 | + | 537 | WP_000056329.1 | hypothetical protein | - |
| LQ157_RS21270 (4340696) | 4340696..4340914 | + | 219 | WP_000382622.1 | hypothetical protein | - |
| LQ157_RS21275 (4341313) | 4341313..4342335 | + | 1023 | WP_001367704.1 | IS21 family transposase IS100kyp | Transposase |
| LQ157_RS21280 (4342332) | 4342332..4343114 | + | 783 | WP_001317493.1 | IS21 family transposase IS100kyp | Transposase |
| LQ157_RS21285 (4343406) | 4343406..4344197 | + | 792 | WP_127781554.1 | hypothetical protein | - |
| LQ157_RS21290 (4344395) | 4344395..4345219 | + | 825 | WP_023147405.1 | hypothetical protein | VF |
| LQ157_RS21295 (4345770) | 4345770..4346501 | - | 732 | WP_001075466.1 | inovirus-type Gp2 protein | - |
| LQ157_RS21300 (4347985) | 4347985..4349208 | - | 1224 | WP_001107214.1 | hypothetical protein | - |
| LQ157_RS21305 (4349309) | 4349309..4350193 | + | 885 | WP_001116802.1 | YfjP family GTPase | - |
| LQ157_RS21310 (4350396) | 4350396..4351076 | + | 681 | WP_001282919.1 | WYL domain-containing protein | - |
| LQ157_RS21315 (4351224) | 4351224..4351901 | + | 678 | WP_001097305.1 | hypothetical protein | - |
| LQ157_RS21320 (4351907) | 4351907..4352140 | + | 234 | WP_001278287.1 | DUF905 family protein | - |
| LQ157_RS21325 (4352230) | 4352230..4353048 | + | 819 | WP_001175169.1 | DUF932 domain-containing protein | - |
| LQ157_RS21330 (4353140) | 4353140..4353625 | + | 486 | WP_000206658.1 | antirestriction protein | - |
| LQ157_RS21335 (4353641) | 4353641..4354117 | + | 477 | WP_001367707.1 | RadC family protein | - |
| LQ157_RS21340 (4354204) | 4354204..4354425 | + | 222 | WP_000691819.1 | DUF987 domain-containing protein | - |
| LQ157_RS21345 (4354505) | 4354505..4354873 | + | 369 | WP_021525985.1 | type IV toxin-antitoxin system YeeU family antitoxin | Antitoxin Detail |
| LQ157_RS21350 (4354963) | 4354963..4355337 | + | 375 | WP_001094442.1 | TA system toxin CbtA family protein | Toxin Detail |
| LQ157_RS21355 (4355334) | 4355334..4355822 | + | 489 | WP_000777553.1 | DUF5983 family protein | - |
| LQ157_RS21360 (4355834) | 4355834..4356031 | + | 198 | WP_000839281.1 | DUF957 domain-containing protein | - |
| LQ157_RS21365 (4356128) | 4356128..4356697 | + | 570 | WP_001290249.1 | DUF4942 domain-containing protein | - |
| LQ157_RS21370 (4357446) | 4357446..4358984 | + | 1539 | WP_001187182.1 | lysine decarboxylation/transport transcriptional activator CadC | - |
| LQ157_RS21375 (4359350) | 4359350..4360684 | + | 1335 | WP_000092909.1 | cadaverine/lysine antiporter | - |
| LQ157_RS21380 (4360764) | 4360764..4362911 | + | 2148 | WP_001295383.1 | lysine decarboxylase CadA | - |
| LQ157_RS21385 (4362970) | 4362970..4364427 | + | 1458 | WP_000856841.1 | dipeptide/tripeptide permease DtpC | - |
| LQ157_RS21390 (4364664) | 4364664..4366181 | + | 1518 | WP_001295074.1 | lysine--tRNA ligase | - |
| LQ157_RS21395 (4366300) | 4366300..4366473 | - | 174 | WP_001173343.1 | type V toxin-antitoxin system toxin GhoT | Toxin Detail |
| LQ157_RS21400 (4366501) | 4366501..4366797 | - | 297 | WP_001425728.1 | type V toxin-antitoxin system endoribonuclease antitoxin GhoS | Antitoxin Detail |
| LQ157_RS21405 (4367024) | 4367024..4367296 | - | 273 | WP_000405647.1 | GNAT family N-acetyltransferase | - |
| LQ157_RS21410 (4367308) | 4367308..4367538 | - | 231 | WP_000371700.1 | 4Fe-4S mono-cluster protein YjdI | - |
| LQ157_RS21415 (4367719) | 4367719..4369350 | + | 1632 | WP_001216487.1 | sensor histidine kinase | - |
| LQ157_RS21420 (4369347) | 4369347..4370066 | + | 720 | WP_000611288.1 | two-component system response regulator DcuR | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|