MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 167269 bp
Accession: NZ_OW485604 Location: 1..167269 Organism: Rhodovastum atsumiense strain G2-11 Replicon: plasmid RHOApc
Accession: NZ_OW485604 Location: 1..167269 Organism: Rhodovastum atsumiense strain G2-11 Replicon: plasmid RHOApc
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NBY65_RS30875 (RHOA_PC0001) | 66..854 | - | 789 | WP_150045475.1 | Octopine permease ATP-binding protein P | VF |
| NBY65_RS30880 (RHOA_PC0002) | 897..1589 | - | 693 | WP_150045476.1 | ABC transporter permease subunit | - |
| NBY65_RS30885 (RHOA_PC0003) | 1594..2310 | - | 717 | WP_150045477.1 | ABC transporter permease subunit | - |
| NBY65_RS30890 (RHOA_PC0004) | 2636..3415 | - | 780 | WP_203330741.1 | transporter substrate-binding domain-containing protein | - |
| NBY65_RS33975 (RHOA_PC0006) | 3879..4394 | - | 516 | WP_150045479.1 | IS630 family transposase ISAli3 | Transposase |
| NBY65_RS30900 (RHOA_PC0007) | 4400..5155 | + | 756 | WP_250266005.1 | transposase | - |
| NBY65_RS30905 (RHOA_PC0008) | 5224..6207 | + | 984 | WP_150045481.1 | IS1595 family transposase ISMtsp22 | Transposase |
| NBY65_RS30910 (RHOA_PC0009) | 6204..6629 | - | 426 | WP_150045482.1 | hypothetical protein | - |
| NBY65_RS30915 (RHOA_PC0010) | 6733..7575 | + | 843 | WP_250266006.1 | transposase | - |
| NBY65_RS30920 (RHOA_PC0011) | 7731..9269 | - | 1539 | WP_250266007.1 | Fic family protein | - |
| NBY65_RS30925 (RHOA_PC0012) | 9537..9880 | + | 344 | Protein_10 | IS3 family transposase ISAli5 | Transposase |
| NBY65_RS30930 | 9954..10091 | + | 138 | WP_162530926.1 | IS3 family transposase ISAav4 | Transposase |
| NBY65_RS30935 (RHOA_PC0014) | 10441..10896 | - | 456 | WP_275266347.1 | winged helix-turn-helix domain-containing protein | - |
| NBY65_RS30940 (RHOA_PC0015) | 10883..11368 | - | 486 | WP_250266036.1 | IS5 family transposase ISAzs9 | Transposase |
| NBY65_RS30945 (RHOA_PC0016) | 11266..11640 | - | 375 | WP_250266008.1 | IS5 family transposase ISAli9 | Transposase |
| NBY65_RS30950 (RHOA_PC0018) | 11814..11987 | - | 174 | WP_162530925.1 | hypothetical protein | - |
| NBY65_RS30955 (RHOA_PC0019) | 12415..13125 | + | 711 | WP_150045759.1 | AAA family ATPase | - |
| NBY65_RS30960 (RHOA_PC0020) | 13232..13807 | + | 576 | WP_150045758.1 | DUF3102 domain-containing protein | - |
| NBY65_RS30965 | 13986..14330 | - | 345 | WP_150045757.1 | hypothetical protein | - |
| NBY65_RS30970 (RHOA_PC0024) | 14845..15063 | - | 219 | WP_150045755.1 | hypothetical protein | - |
| NBY65_RS30975 (RHOA_PC0025) | 15041..15664 | - | 624 | WP_162530923.1 | zinc ribbon domain-containing protein | - |
| NBY65_RS30980 (RHOA_PC0026) | 15726..16931 | + | 1206 | WP_250266009.1 | IS256 family transposase ISCARN47 | Transposase |
| NBY65_RS30985 | 17685..17798 | + | 114 | Protein_22 | transposase | - |
| NBY65_RS30990 (RHOA_PC0029) | 18005..18922 | - | 918 | WP_150045795.1 | replication protein RepA | - |
| NBY65_RS30995 (RHOA_PC0032) | 19980..20612 | - | 633 | WP_203330776.1 | IS66 family transposase ISSme3 | Transposase |
| NBY65_RS31000 (RHOA_PC0033) | 20609..22186 | - | 1578 | WP_250266011.1 | IS66 family transposase ISSme3 | Transposase |
| NBY65_RS31005 (RHOA_PC0034) | 22194..22589 | - | 396 | WP_150045236.1 | IS66 family transposase IS693 | Transposase |
| NBY65_RS31010 (RHOA_PC0035) | 22586..23005 | - | 420 | WP_150045235.1 | IS66 family transposase ISAzca2 | Transposase |
| NBY65_RS31015 (RHOA_PC0036) | 23146..23646 | - | 501 | WP_250266012.1 | IS630 family transposase ISAzs14 | Transposase |
| NBY65_RS31020 (RHOA_PC0037) | 23694..24212 | - | 519 | WP_250266014.1 | IS630 family transposase ISAzs14 | Transposase |
| NBY65_RS31025 (RHOA_PC0039) | 24759..25271 | + | 513 | WP_150045216.1 | helix-turn-helix domain-containing protein | - |
| NBY65_RS31030 (RHOA_PC0041) | 25442..25684 | + | 243 | WP_150045217.1 | type II toxin-antitoxin system prevent-host-death family antitoxin | - |
| NBY65_RS31035 (RHOA_PC0043) | 25681..26124 | + | 444 | WP_150045218.1 | hypothetical protein | - |
| NBY65_RS31040 (RHOA_PC0044) | 26145..27302 | - | 1158 | WP_150045219.1 | hypothetical protein | - |
| NBY65_RS31045 (RHOA_PC0045) | 27292..28797 | - | 1506 | WP_275266339.1 | SNF2-related protein | - |
| NBY65_RS31050 (RHOA_PC0046) | 28901..30844 | + | 1944 | WP_150045221.1 | hypothetical protein | - |
| NBY65_RS31055 (RHOA_PC0047) | 30846..33323 | + | 2478 | WP_150045222.1 | hypothetical protein | - |
| NBY65_RS31060 (RHOA_PC0048) | 33326..33775 | + | 450 | WP_150045223.1 | hypothetical protein | - |
| NBY65_RS31065 (RHOA_PC0049) | 33814..34662 | + | 849 | WP_150045224.1 | DNA-primase RepB domain-containing protein | - |
| NBY65_RS31070 (RHOA_PC0050) | 34659..35081 | + | 423 | WP_150045225.1 | hypothetical protein | - |
| NBY65_RS31075 (RHOA_PC0051) | 35081..37390 | + | 2310 | WP_239003177.1 | AAA family ATPase | - |
| NBY65_RS31080 (RHOA_PC0052) | 37383..38492 | + | 1110 | WP_150045227.1 | hypothetical protein | - |
| NBY65_RS31085 (RHOA_PC0053) | 38506..40227 | + | 1722 | WP_150045228.1 | site-specific integrase | - |
| NBY65_RS31090 (RHOA_PC0055) | 41414..41716 | - | 303 | Protein_43 | IS5 family transposase ISMex42 | Transposase |
| NBY65_RS31095 (RHOA_PC0056) | 41903..42859 | + | 957 | WP_150045230.1 | Tn3 family transposase TnpR_TnXo19 | Transposase |
| NBY65_RS31100 (RHOA_PC0057) | 42863..43525 | + | 663 | WP_150045231.1 | hypothetical protein | - |
| NBY65_RS31105 (RHOA_PC0060) | 44048..45085 | - | 1038 | WP_239003169.1 | transposase | - |
| NBY65_RS31110 (RHOA_PC0062) | 45680..45829 | - | 150 | WP_162530861.1 | hypothetical protein | - |
| NBY65_RS31115 (RHOA_PC0063) | 45987..48065 | + | 2079 | WP_150045232.1 | Sensor histidine kinase RcsC | VF |
| NBY65_RS31120 (RHOA_PC0065) | 48119..48550 | + | 432 | WP_150045233.1 | DUF29 domain-containing protein | - |
| NBY65_RS31125 (RHOA_PC0066) | 48593..48934 | + | 342 | WP_150045234.1 | dihydrofolate reductase family protein | - |
| NBY65_RS31130 (RHOA_PC0067) | 49016..49435 | + | 420 | WP_250266016.1 | IS66 family transposase ISFpe1 | Transposase |
| NBY65_RS31135 (RHOA_PC0068) | 49432..49826 | + | 395 | Protein_52 | IS66 family transposase IS693 | Transposase |
| NBY65_RS31140 (RHOA_PC0069) | 49834..51411 | + | 1578 | WP_250266017.1 | IS66 family transposase ISSme3 | Transposase |
| NBY65_RS31145 (RHOA_PC0070) | 51542..52039 | + | 498 | WP_250266018.1 | IS66 family transposase ISSme3 | Transposase |
| NBY65_RS31150 (RHOA_PC0071) | 52208..52408 | + | 201 | WP_275266353.1 | dihydrofolate reductase family protein | - |
| NBY65_RS31155 (RHOA_PC0072) | 52416..52646 | - | 231 | WP_150045879.1 | hypothetical protein | - |
| NBY65_RS31160 (RHOA_PC0073) | 52927..53637 | - | 711 | WP_250266019.1 | IS6 family transposase ISRssp3 | Transposase |
| NBY65_RS31165 (RHOA_PC0074) | 53832..55742 | - | 1911 | WP_150045171.1 | diguanylate cyclase | - |
| NBY65_RS31170 (RHOA_PC0075) | 56003..56935 | + | 933 | WP_239003152.1 | IS1595 family transposase ISPa72 | Transposase |
| NBY65_RS31175 (RHOA_PC0079) | 58004..61690 | - | 3687 | WP_250266021.1 | PAS domain S-box protein | - |
| NBY65_RS31180 (RHOA_PC0081) | 62882..66313 | + | 3432 | WP_150045169.1 | Sensor histidine kinase RcsC | VF |
| NBY65_RS31185 (RHOA_PC0082) | 66487..71115 | + | 4629 | WP_162530853.1 | Sensor histidine kinase RcsC | VF |
| NBY65_RS31190 (RHOA_PC0086) | 71709..73817 | + | 2109 | WP_150045166.1 | Sensor histidine kinase RcsC | VF |
| NBY65_RS31195 (RHOA_PC0087) | 74023..74724 | + | 702 | WP_239003150.1 | IS6 family transposase ISAcma1 | Transposase |
| NBY65_RS31200 (RHOA_PC0088) | 74836..75912 | + | 1077 | WP_150045164.1 | IS630 family transposase ISBj5 | Transposase |
| NBY65_RS31205 (RHOA_PC0089) | 76053..77597 | - | 1545 | WP_150045163.1 | Fic family protein | - |
| NBY65_RS31210 (RHOA_PC0090) | 78018..78926 | + | 909 | WP_150045162.1 | DUF3991 and toprim domain-containing protein | - |
| NBY65_RS31215 (RHOA_PC0092) | 79125..80150 | + | 1026 | WP_162530851.1 | AAA family ATPase | - |
| NBY65_RS31220 (RHOA_PC0093) | 80245..81144 | + | 900 | WP_150045160.1 | hypothetical protein | - |
| NBY65_RS31225 (RHOA_PC0094) | 81159..82355 | + | 1197 | WP_162530850.1 | VWA-like domain-containing protein | - |
| NBY65_RS31230 (RHOA_PC0095) | 82395..82964 | - | 570 | WP_150045883.1 | hypothetical protein | - |
| NBY65_RS31235 (RHOA_PC0096) | 83254..83820 | + | 567 | WP_239003306.1 | hypothetical protein | - |
| NBY65_RS31240 (RHOA_PC0097) | 83817..84401 | + | 585 | WP_150045859.1 | zeta toxin family protein | - |
| NBY65_RS31245 (RHOA_PC0098) | 84382..84930 | - | 549 | WP_250266023.1 | hypothetical protein | - |
| NBY65_RS31250 (RHOA_PC0099) | 85256..87004 | + | 1749 | WP_250266025.1 | ParB/RepB/Spo0J family partition protein | - |
| NBY65_RS31255 (RHOA_PC0101) | 87363..88139 | + | 777 | WP_150045813.1 | MOSC domain-containing protein | - |
| NBY65_RS31260 (RHOA_PC0102) | 88145..88375 | + | 231 | WP_150045812.1 | hypothetical protein | - |
| NBY65_RS31265 (RHOA_PC0103) | 88757..89326 | - | 570 | WP_150045811.1 | hypothetical protein | - |
| NBY65_RS31270 (RHOA_PC0104) | 89961..91214 | + | 1254 | WP_250266027.1 | DUF1173 family protein | - |
| NBY65_RS31275 (RHOA_PC0106) | 91558..92118 | + | 561 | WP_150045848.1 | hypothetical protein | - |
| NBY65_RS31280 (RHOA_PC0108) | 92174..92554 | + | 381 | WP_250266028.1 | hypothetical protein | - |
| NBY65_RS31285 (RHOA_PC0110) | 92774..93346 | + | 573 | WP_150045863.1 | MbcA/ParS/Xre antitoxin family protein | - |
| NBY65_RS31290 (RHOA_PC0111) | 93343..94023 | + | 681 | WP_250266029.1 | RES family NAD+ phosphorylase | - |
| NBY65_RS31295 (RHOA_PC0112) | 94100..95104 | - | 1005 | WP_150045791.1 | hypothetical protein | - |
| NBY65_RS31300 (RHOA_PC0113) | 95108..95677 | - | 570 | WP_150045792.1 | Tn3 family transposase ISPsy42 | Transposase |
| NBY65_RS31305 (RHOA_PC0114) | 95842..97416 | + | 1575 | WP_150045793.1 | Tn3 family transposase TnpA_TnAs3 | Transposase |
| NBY65_RS31310 (RHOA_PC0115) | 97413..98822 | + | 1410 | WP_239003302.1 | Tn3 family transposase TnpA_ISAzs17 | Transposase |
| NBY65_RS31315 (RHOA_PC0116) | 99257..99478 | + | 222 | WP_150045828.1 | type II toxin-antitoxin system VapB family antitoxin | Antitoxin Detail |
| NBY65_RS31320 (RHOA_PC0117) | 99480..99884 | + | 405 | WP_250266031.1 | tRNA(fMet)-specific endonuclease VapC | Toxin Detail |
| NBY65_RS31325 (RHOA_PC0118) | 99951..100436 | + | 486 | WP_150045830.1 | DUF2384 domain-containing protein | Antitoxin Detail |
| NBY65_RS31330 (RHOA_PC0119) | 100433..100918 | + | 486 | WP_250266032.1 | RES family NAD+ phosphorylase | Toxin Detail |
| NBY65_RS31335 (RHOA_PC0120) | 101040..102386 | + | 1347 | WP_250266033.1 | HipA domain-containing protein | - |
| NBY65_RS31340 (RHOA_PC0121) | 102373..102672 | + | 300 | WP_250266034.1 | helix-turn-helix domain-containing protein | - |
| NBY65_RS31345 (RHOA_PC0122) | 103188..103358 | + | 171 | WP_162530947.1 | hypothetical protein | - |
| NBY65_RS31350 (RHOA_PC0124) | 103410..103598 | + | 189 | WP_150045873.1 | hypothetical protein | - |
| NBY65_RS31355 (RHOA_PC0125) | 104040..104249 | - | 210 | WP_250265985.1 | hypothetical protein | - |
| NBY65_RS31360 (RHOA_PC0126) | 105122..106051 | + | 930 | WP_250265987.1 | hypothetical protein | - |
| NBY65_RS31365 (RHOA_PC0127) | 106048..106914 | + | 867 | WP_150045213.1 | hypothetical protein | - |
| NBY65_RS31370 (RHOA_PC0128) | 106914..107408 | + | 495 | WP_150045212.1 | hypothetical protein | - |
| NBY65_RS31375 (RHOA_PC0129) | 107405..109345 | + | 1941 | WP_150045211.1 | type IV secretion system DNA-binding domain-containing protein | - |
| NBY65_RS31380 (RHOA_PC0130) | 109364..112309 | + | 2946 | WP_150045210.1 | Multifunctional conjugation protein TraI | Relaxase |
| NBY65_RS31385 (RHOA_PC0132) | 112797..114554 | - | 1758 | WP_150045209.1 | MOSC and FAD-binding oxidoreductase domain-containing protein | - |
| NBY65_RS31390 (RHOA_PC0133) | 114721..116340 | - | 1620 | WP_150045208.1 | Multidrug export protein EmrB | VF |
| NBY65_RS31395 (RHOA_PC0134) | 116337..118106 | - | 1770 | WP_203330724.1 | p-hydroxybenzoic acid efflux pump subunit AaeA | VF |
| NBY65_RS31400 (RHOA_PC0135) | 118308..119063 | + | 756 | WP_150045207.1 | SDR family oxidoreductase | - |
| NBY65_RS31405 (RHOA_PC0136) | 119096..119515 | + | 420 | WP_150045206.1 | cupin domain-containing protein | - |
| NBY65_RS31410 (RHOA_PC0137) | 119771..120151 | + | 381 | WP_150045205.1 | nuclear transport factor 2 family protein | - |
| NBY65_RS31415 (RHOA_PC0138) | 120425..123583 | - | 3159 | WP_162530858.1 | conjugal transfer protein TraG N-terminal domain-containing protein | - |
| NBY65_RS31420 (RHOA_PC0139) | 123586..124971 | - | 1386 | WP_162530857.1 | conjugal transfer protein TraH | - |
| NBY65_RS31425 (RHOA_PC0140) | 125019..125924 | - | 906 | WP_239003159.1 | conjugal transfer protein TraF | - |
| NBY65_RS31430 (RHOA_PC0141) | 126040..126378 | - | 339 | WP_150045201.1 | helix-turn-helix domain-containing protein | - |
| NBY65_RS31435 (RHOA_PC0142) | 126813..127673 | - | 861 | WP_150045200.1 | hypothetical protein | - |
| NBY65_RS31440 (RHOA_PC0144) | 127799..128077 | + | 279 | WP_150045199.1 | UPF0175 family protein | - |
| NBY65_RS31445 (RHOA_PC0145) | 128081..128590 | + | 510 | WP_203330723.1 | DUF3368 domain-containing protein | - |
| NBY65_RS31450 (RHOA_PC0146) | 128587..128787 | + | 201 | WP_150045198.1 | hypothetical protein | - |
| NBY65_RS31455 (RHOA_PC0147) | 128777..129760 | + | 984 | WP_150045197.1 | tyrosine-type recombinase/integrase | - |
| NBY65_RS31465 (RHOA_PC0151) | 131305..131957 | - | 653 | Protein_118 | IS1380 family transposase ISAcr5 | Transposase |
| NBY65_RS31470 (RHOA_PC0152) | 132121..133290 | + | 1170 | Protein_119 | IS701 family transposase ISMtsp19 | Transposase |
| NBY65_RS31475 (RHOA_PC0153) | 133530..135794 | + | 2265 | WP_150045790.1 | GTPase domain-containing protein | - |
| NBY65_RS31480 (RHOA_PC0154) | 135791..137494 | + | 1704 | WP_150045789.1 | GTPase domain-containing protein | - |
| NBY65_RS31485 (RHOA_PC0156) | 137884..138552 | + | 669 | Protein_122 | DUF927 domain-containing protein | - |
| NBY65_RS31490 (RHOA_PC0158) | 139154..140188 | - | 1035 | Protein_123 | IS630 family transposase ISCARN25 | Transposase |
| NBY65_RS31495 (RHOA_PC0161) | 141813..142217 | + | 405 | WP_150045821.1 | IS630 family transposase ISAzs14 | Transposase |
| NBY65_RS31500 (RHOA_PC0162) | 142209..143309 | - | 1101 | Protein_125 | IS3 family transposase ISAzs23 | Transposase |
| NBY65_RS31505 | 143439..144948 | + | 1510 | WP_250266037.1 | ISNCY family transposase ISAzs34 | Transposase |
| NBY65_RS31510 (RHOA_PC0165) | 144946..145302 | - | 357 | Protein_127 | IS3 family transposase ISAzs23 | Transposase |
| NBY65_RS31515 (RHOA_PC0166) | 145567..146232 | - | 666 | WP_150045835.1 | hypothetical protein | - |
| NBY65_RS31520 (RHOA_PC0168) | 146856..147788 | + | 933 | WP_250265868.1 | IS701 family transposase ISKol8 | Transposase |
| NBY65_RS31525 (RHOA_PC0169) | 147915..148463 | + | 549 | WP_150045775.1 | IS630 family transposase ISAli3 | Transposase |
| NBY65_RS31530 (RHOA_PC0175) | 151440..153041 | - | 1602 | WP_150045776.1 | IS66 family transposase ISAzs18 | Transposase |
| NBY65_RS31535 (RHOA_PC0176) | 153100..153453 | - | 354 | WP_150045777.1 | IS66 family transposase ISAzs21 | Transposase |
| NBY65_RS31540 (RHOA_PC0177) | 153450..153974 | - | 525 | WP_150045778.1 | IS66 family transposase ISAli10 | Transposase |
| NBY65_RS31545 (RHOA_PC0178) | 154098..154244 | - | 147 | Protein_134 | IS3 family transposase ISAli5 | Transposase |
| NBY65_RS31555 (RHOA_PC0182) | 155466..156719 | + | 1254 | WP_284347531.1 | ISKra4 family transposase ISAzba1 | Transposase |
| NBY65_RS31560 (RHOA_PC0183) | 156729..157013 | + | 285 | Protein_137 | IS630 family transposase ISAli3 | Transposase |
| NBY65_RS31565 (RHOA_PC0184) | 157085..157207 | - | 123 | Protein_138 | IS6 family transposase ISRH1 | Transposase |
| NBY65_RS31570 (RHOA_PC0185) | 157267..157944 | + | 678 | WP_150045467.1 | IS6 family transposase ISRssp3 | Transposase |
| NBY65_RS31575 (RHOA_PC0186) | 158236..159381 | - | 1146 | WP_150045468.1 | glycerate kinase | - |
| NBY65_RS31580 (RHOA_PC0187) | 159443..160108 | - | 666 | WP_150045469.1 | nickel pincer cofactor biosynthesis protein LarB | - |
| NBY65_RS31585 (RHOA_PC0188) | 160105..160908 | - | 804 | WP_150045470.1 | adenine nucleotide alpha hydrolase | - |
| NBY65_RS31590 (RHOA_PC0189) | 160905..162236 | - | 1332 | WP_150045471.1 | LarC family nickel insertion protein | - |
| NBY65_RS31595 (RHOA_PC0190) | 162229..163521 | - | 1293 | WP_203330740.1 | nickel-dependent lactate racemase | - |
| NBY65_RS31600 (RHOA_PC0191) | 163607..164614 | - | 1008 | WP_150045473.1 | 2-keto-3-deoxygluconate permease | - |
| NBY65_RS31605 (RHOA_PC0192) | 165084..167021 | - | 1938 | WP_162530885.1 | Anaerobic nitric oxide reductase transcription regulator NorR | VF |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|