MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 33527 bp
Accession: NZ_OW052302 Location: 3613990..3647516 Organism: Mycobacterium tuberculosis strain Lineage 3.1.1 isolate Mycobacterium tuberculosis Replicon: chromosome
Accession: NZ_OW052302 Location: 3613990..3647516 Organism: Mycobacterium tuberculosis strain Lineage 3.1.1 isolate Mycobacterium tuberculosis Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| MR176_RS16565 | 3609329..3610240 | + | 912 | WP_003414505.1 | sugar ABC transporter permease | - |
| MR176_RS16570 | 3610237..3611064 | + | 828 | WP_003414504.1 | carbohydrate ABC transporter permease | - |
| MR176_RS16575 | 3611067..3612377 | + | 1311 | WP_003414501.1 | ABC transporter substrate-binding protein | - |
| MR176_RS16580 | 3612370..3613452 | + | 1083 | WP_003414499.1 | sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC | - |
| MR176_RS16585 | 3613531..3614280 | - | 750 | WP_003414497.1 | enoyl-CoA hydratase | - |
| MR176_RS16590 | 3614327..3614542 | + | 216 | WP_003414495.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| MR176_RS16595 | 3614539..3614931 | + | 393 | WP_003414492.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| MR176_RS16600 | 3614952..3615221 | + | 270 | WP_003414489.1 | DUF2277 family protein | - |
| MR176_RS16605 | 3615218..3615763 | + | 546 | WP_019284034.1 | DUF1802 family protein | - |
| MR176_RS16610 | 3616068..3616955 | + | 888 | WP_015630563.1 | type IV toxin-antitoxin system AbiEi family antitoxin | Antitoxin Detail |
| MR176_RS16615 | 3616958..3617842 | + | 885 | WP_003414409.1 | nucleotidyl transferase AbiEii/AbiGii toxin family protein | Toxin Detail |
| MR176_RS16620 | 3618114..3618659 | + | 546 | WP_014584866.1 | DUF1802 family protein | - |
| MR176_RS16625 | 3618993..3619781 | + | 789 | WP_003917092.1 | CRISPR-associated endoribonuclease Cas6 | - |
| MR176_RS16630 | 3619778..3622216 | + | 2439 | WP_003900580.1 | type III-A CRISPR-associated protein Cas10/Csm1 | - |
| MR176_RS16635 | 3622213..3622587 | + | 375 | WP_003414296.1 | type III-A CRISPR-associated protein Csm2 | - |
| MR176_RS16640 | 3622597..3623307 | + | 711 | WP_003414292.1 | type III-A CRISPR-associated RAMP protein Csm3 | - |
| MR176_RS16645 | 3623288..3624196 | + | 909 | WP_003414288.1 | type III-A CRISPR-associated RAMP protein Csm4 | - |
| MR176_RS16650 | 3624193..3625320 | + | 1128 | WP_003414285.1 | type III-A CRISPR-associated RAMP protein Csm5 | - |
| MR176_RS16655 | 3625317..3626564 | + | 1248 | WP_003899494.1 | type III-A CRISPR-associated CARF protein Csm6 | - |
| MR176_RS16660 | 3626577..3627593 | + | 1017 | WP_003414279.1 | CRISPR-associated endonuclease Cas1 | - |
| MR176_RS16665 | 3627594..3627935 | + | 342 | WP_003414276.1 | CRISPR-associated endonuclease Cas2 | - |
| MR176_RS16670 | 3630951..3631763 | - | 813 | WP_003899491.1 | IS481 family transposase ISChy3 | VF |
| MR176_RS16675 | 3631760..3633169 | - | 1410 | WP_025985358.1 | IS481 family transposase ISGur11 | Transposase |
| MR176_RS16680 | 3633240..3633848 | - | 609 | WP_003414195.1 | hypothetical protein | - |
| MR176_RS16685 | 3634010..3634246 | + | 237 | Protein_3301 | transposase | - |
| MR176_RS16690 | 3634268..3634579 | - | 312 | WP_003414190.1 | hypothetical protein | - |
| MR176_RS16700 | 3636072..3636299 | - | 228 | Protein_3304 | hypothetical protein | - |
| MR176_RS16705 | 3636533..3636706 | - | 174 | WP_234713711.1 | hypothetical protein | - |
| MR176_RS16710 | 3637408..3637668 | - | 261 | Protein_3306 | ISNCY family transposase ISKol11 | Transposase |
| MR176_RS16715 | 3637885..3638076 | - | 192 | WP_003414184.1 | hypothetical protein | - |
| MR176_RS16720 | 3638073..3638465 | - | 393 | WP_078397589.1 | hypothetical protein | - |
| MR176_RS16725 | 3638613..3638867 | + | 255 | WP_155936531.1 | hypothetical protein | - |
| MR176_RS16730 | 3639043..3639510 | - | 468 | WP_003414177.1 | DUF1778 domain-containing protein | - |
| MR176_RS16735 | 3639509..3640552 | + | 1044 | WP_016720604.1 | DUF2293 domain-containing protein | - |
| MR176_RS16740 | 3640595..3640825 | + | 231 | WP_003901465.1 | type II toxin-antitoxin system antitoxin MazE9 | Antitoxin Detail |
| MR176_RS16745 | 3640809..3641165 | + | 357 | WP_003414166.1 | type II toxin-antitoxin system toxin endoribonuclease MazF9 | Toxin Detail |
| MR176_RS16750 | 3641267..3642916 | - | 1650 | WP_003899485.1 | CocE/NonD family hydrolase | - |
| MR176_RS16755 | 3642935..3643522 | - | 588 | WP_003914429.1 | DUF3558 family protein | - |
| MR176_RS16760 | 3643695..3644021 | + | 327 | WP_003414157.1 | hypothetical protein | - |
| MR176_RS16765 | 3644025..3645713 | + | 1689 | WP_003414155.1 | alpha/beta hydrolase family protein | - |
| MR176_RS16770 | 3645713..3646276 | + | 564 | WP_003900574.1 | LppA family lipoprotein | - |
| MR176_RS16775 | 3646421..3647395 | + | 975 | WP_003414151.1 | metallophosphoesterase | - |
| MR176_RS16780 | 3647392..3648075 | + | 684 | WP_003414149.1 | 4'-phosphopantetheinyl transferase | - |
| MR176_RS16785 | 3648072..3648968 | + | 897 | WP_003414147.1 | tRNA pseudouridine(55) synthase TruB | - |
| MR176_RS16790 | 3649170..3649751 | + | 582 | WP_003414146.1 | IS607-like element IS1602 family transposase | - |
| MR176_RS16795 | 3649751..3651130 | + | 1380 | WP_003899482.1 | IS607 family element RNA-guided endonuclease TnpB | - |
| MR176_RS16800 | 3651163..3652368 | + | 1206 | WP_003414142.1 | lipid-transfer protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|