NZ_OU6591631..171398

MGE detailed information

MGE type: Non-Mobilizable plasmid        MGE length: 171398 bp
Accession: NZ_OU659163        Location: 1..171398         Organism: Providencia alcalifaciens strain 2019-04-29292-1-3 isolate 2019-04-29292-1-3       Replicon: plasmid 2


Gene structure


The 5 kb flanking regions of this MGE are displayed.

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
LDO74_RS19305 (NVI2019_OGMBKCAO_03877) 377..9355 - 8979 WP_224051112.1 TcdA/TcdB catalytic glycosyltransferase domain-containing protein -
LDO74_RS19310 9975..10198 + 224 Protein_1 transposase -
LDO74_RS19315 10252..11146 + 895 Protein_2 DDE-type integrase/transposase/recombinase -
LDO74_RS19320 (NVI2019_OGMBKCAO_03880) 11969..12907 - 939 WP_051420266.1 RepA family replication protein -
LDO74_RS19325 (NVI2019_OGMBKCAO_03881) 13094..14092 - 999 WP_282563851.1 ParB family protein -
LDO74_RS19330 (NVI2019_OGMBKCAO_03882) 14082..15296 - 1215 WP_224051126.1 AAA family ATPase -
LDO74_RS19335 (NVI2019_OGMBKCAO_03883) 16132..16857 - 726 WP_051420265.1 tyrosine-type recombinase/integrase -
LDO74_RS19340 17422..17622 - 201 WP_154635416.1 zinc ribbon domain-containing protein -
LDO74_RS19345 (NVI2019_OGMBKCAO_03884) 18707..19654 - 948 WP_224051111.1 ISNCY family transposase ISPlu15 VF
LDO74_RS19350 (NVI2019_OGMBKCAO_03885) 20610..22256 + 1647 WP_224051110.1 lipid IV(A) 4-amino-4-deoxy-L-arabinosyltransferase -
LDO74_RS19355 22500..23448 - 949 Protein_10 Rpn family recombination-promoting nuclease/putative transposase -
LDO74_RS19360 (NVI2019_OGMBKCAO_03889) 24789..25337 - 549 WP_224051109.1 hypothetical protein VF
LDO74_RS19365 25352..26163 - 812 Protein_12 Cytolethal distending toxin subunit B VF
LDO74_RS19370 (NVI2019_OGMBKCAO_03892) 26184..26933 - 750 WP_224051108.1 hypothetical protein VF
LDO74_RS19375 27950..28174 - 225 Protein_14 zinc ribbon domain-containing protein -
LDO74_RS19380 28151..28279 + 129 WP_224051107.1 helix-turn-helix domain-containing protein -
LDO74_RS19385 (NVI2019_OGMBKCAO_03893) 28521..37649 + 9129 WP_282565830.1 hypothetical protein VF
LDO74_RS19390 38027..39168 + 1142 Protein_17 IS256 family transposase -
LDO74_RS19395 (NVI2019_OGMBKCAO_03896) 39217..39738 - 522 WP_282563849.1 Fic family protein -
LDO74_RS19400 (NVI2019_OGMBKCAO_03897) 39785..39997 - 213 WP_224051104.1 hypothetical protein -
LDO74_RS19405 (NVI2019_OGMBKCAO_03898) 39970..40317 - 348 WP_282563848.1 hypothetical protein -
LDO74_RS19410 (NVI2019_OGMBKCAO_03900) 40871..41410 + 540 WP_224051102.1 fimbrial protein -
LDO74_RS19415 (NVI2019_OGMBKCAO_03901) 41484..42155 + 672 WP_224051101.1 Chaperone protein FimC VF
LDO74_RS19420 (NVI2019_OGMBKCAO_03902) 42171..42899 + 729 WP_224051100.1 molecular chaperone -
LDO74_RS19425 (NVI2019_OGMBKCAO_03903) 42856..45507 + 2652 WP_224051099.1 Outer membrane usher protein FimD VF
LDO74_RS19430 (NVI2019_OGMBKCAO_03904) 45525..46721 + 1197 WP_224051098.1 hypothetical protein -
LDO74_RS19435 (NVI2019_OGMBKCAO_03905) 46731..47294 + 564 WP_224051097.1 hypothetical protein -
LDO74_RS19445 47964..49105 + 1142 Protein_27 IS256 family transposase -
LDO74_RS19455 (NVI2019_OGMBKCAO_03910) 50518..51462 - 945 WP_282565831.1 conjugal transfer protein TraH -
LDO74_RS21090 (NVI2019_OGMBKCAO_03912) 51474..51626 - 153 WP_263428478.1 conjugal transfer protein TraH -
LDO74_RS19465 (NVI2019_OGMBKCAO_03913) 52708..53022 - 315 WP_036978107.1 HigA family addiction module antitoxin Antitoxin Detail
LDO74_RS19470 (NVI2019_OGMBKCAO_03914) 53022..53300 - 279 WP_036978105.1 type II toxin-antitoxin system RelE/ParE family toxin Toxin Detail
LDO74_RS19485 53828..54109 - 282 WP_036978103.1 hypothetical protein -
LDO74_RS19490 (NVI2019_OGMBKCAO_03916) 54141..54674 - 534 WP_282563841.1 type-F conjugative transfer system pilin assembly protein TraF -
LDO74_RS19495 (NVI2019_OGMBKCAO_03917) 54617..54913 - 297 WP_282563840.1 hypothetical protein -
LDO74_RS19500 (NVI2019_OGMBKCAO_03918) 54883..55734 - 852 WP_282563862.1 conjugal transfer protein TraN -
LDO74_RS19505 (NVI2019_OGMBKCAO_03919) 55924..56751 - 828 WP_051420221.1 hypothetical protein -
LDO74_RS19510 (NVI2019_OGMBKCAO_03920) 56733..57368 - 636 WP_282563847.1 type-F conjugative transfer system pilin assembly protein TrbC -
LDO74_RS19515 (NVI2019_OGMBKCAO_03922) 57383..58378 - 996 Protein_38 conjugal transfer pilus assembly protein TraU -
LDO74_RS19520 58366..59007 - 642 Protein_39 type-F conjugative transfer system protein TraW -
LDO74_RS19525 (NVI2019_OGMBKCAO_03925) 59018..59443 - 426 WP_071992439.1 type-F conjugative transfer system protein TrbI -
LDO74_RS19530 (NVI2019_OGMBKCAO_03926) 59419..59745 - 327 WP_224051093.1 hypothetical protein -
LDO74_RS19535 (NVI2019_OGMBKCAO_03927) 59773..62130 - 2358 WP_224051092.1 type IV secretion system protein TraC -
LDO74_RS19540 (NVI2019_OGMBKCAO_03928) 62132..62473 - 342 WP_224051091.1 TraV family lipoprotein -
LDO74_RS19545 (NVI2019_OGMBKCAO_03929) 62587..62937 - 351 WP_282565832.1 transcription/translation regulatory transformer protein RfaH -
LDO74_RS19555 (NVI2019_OGMBKCAO_03931) 62931..63986 - 1056 Protein_45 TrbI/VirB10 family protein -
LDO74_RS19560 (NVI2019_OGMBKCAO_03932) 64099..64446 - 348 WP_224051090.1 hypothetical protein -
LDO74_RS19565 (NVI2019_OGMBKCAO_03934) 64675..65244 - 570 WP_224051089.1 type IV conjugative transfer system protein TraE -
LDO74_RS19570 (NVI2019_OGMBKCAO_03935) 65259..65564 - 306 WP_036979544.1 type IV conjugative transfer system protein TraL -
LDO74_RS19575 (NVI2019_OGMBKCAO_03936) 65586..65819 - 234 WP_051420256.1 type IV conjugative transfer system pilin TraA -
LDO74_RS19580 (NVI2019_OGMBKCAO_03937) 66208..66399 - 192 WP_036979543.1 TraY domain-containing protein -
LDO74_RS19585 67279..67494 - 216 WP_282563845.1 hypothetical protein -
LDO74_RS19590 (NVI2019_OGMBKCAO_03938) 67751..68011 - 261 WP_051420257.1 relaxosome protein TraM -
LDO74_RS19595 68478..68902 + 425 Protein_53 transglycosylase SLT domain-containing protein -
LDO74_RS19600 (NVI2019_OGMBKCAO_03940) 69466..69759 + 294 WP_282563844.1 DUF6290 family protein -
LDO74_RS19605 (NVI2019_OGMBKCAO_03941) 69698..69973 + 276 WP_036979539.1 type II toxin-antitoxin system RelE/ParE family toxin -
LDO74_RS21260 70027..70353 + 327 WP_282563843.1 hypothetical protein -
LDO74_RS19610 (NVI2019_OGMBKCAO_03942) 70342..70674 - 333 WP_051420258.1 N-6 DNA methylase -
LDO74_RS19615 (NVI2019_OGMBKCAO_03943) 70705..71151 - 447 WP_051459499.1 hypothetical protein -
LDO74_RS21265 (NVI2019_OGMBKCAO_03944) 71195..71437 - 243 WP_224055086.1 hypothetical protein -
LDO74_RS19625 (NVI2019_OGMBKCAO_03945) 71505..71867 - 363 WP_282563842.1 hypothetical protein -
LDO74_RS19630 (NVI2019_OGMBKCAO_03946) 71909..72160 - 252 WP_036979535.1 hypothetical protein -
LDO74_RS19635 (NVI2019_OGMBKCAO_03947) 72916..73125 - 210 WP_036979533.1 hypothetical protein -
LDO74_RS19640 (NVI2019_OGMBKCAO_03948) 73220..73492 - 273 WP_036979555.1 helix-turn-helix transcriptional regulator -
LDO74_RS19645 (NVI2019_OGMBKCAO_03949) 73479..73805 - 327 WP_036979532.1 type II toxin-antitoxin system RelE/ParE family toxin -
LDO74_RS19650 (NVI2019_OGMBKCAO_03950) 74012..75280 - 1269 WP_036979530.1 translesion error-prone DNA polymerase V subunit UmuC -
LDO74_RS19655 (NVI2019_OGMBKCAO_03951) 75393..75671 - 279 WP_230087585.1 S24 family peptidase -
LDO74_RS19660 (NVI2019_OGMBKCAO_03952) 75866..76135 - 270 WP_036979554.1 plasmid partitioning/stability family protein -
LDO74_RS19670 76380..76682 - 303 Protein_68 recombinase family protein -
LDO74_RS19675 (NVI2019_OGMBKCAO_03954) 76911..77192 - 282 WP_036979529.1 type II toxin-antitoxin system RelE/ParE family toxin Toxin Detail
LDO74_RS19680 (NVI2019_OGMBKCAO_03955) 77182..77433 - 252 WP_036974972.1 type II toxin-antitoxin system Phd/YefM family antitoxin Antitoxin Detail
LDO74_RS19685 77605..78029 - 425 Protein_71 recombinase family protein -
LDO74_RS19690 (NVI2019_OGMBKCAO_03957) 78029..78562 - 534 WP_282563841.1 type-F conjugative transfer system pilin assembly protein TraF -
LDO74_RS19695 (NVI2019_OGMBKCAO_03958) 78505..78801 - 297 WP_282563840.1 hypothetical protein -
LDO74_RS21100 79156..79278 - 123 WP_263422648.1 hypothetical protein -
LDO74_RS19700 (NVI2019_OGMBKCAO_03959) 79299..79646 - 348 WP_051420173.1 ParB/Srx family N-terminal domain-containing protein -
LDO74_RS19705 (NVI2019_OGMBKCAO_03960) 79692..80903 - 1212 Protein_76 IS3 family transposase ISAlg Transposase
LDO74_RS19710 (NVI2019_OGMBKCAO_03962) 81506..82192 + 687 WP_282563839.1 AAA family ATPase -
LDO74_RS19715 (NVI2019_OGMBKCAO_03963) 82144..82422 + 279 WP_036979198.1 ribbon-helix-helix protein, CopG family -
LDO74_RS19720 82794..83045 - 252 Protein_79 helix-turn-helix domain-containing protein -
LDO74_RS19725 83060..84006 - 947 Protein_80 IS3 family transposase -
LDO74_RS19730 (NVI2019_OGMBKCAO_03964) 84916..86142 + 1227 WP_282563838.1 hypothetical protein VF
LDO74_RS19735 (NVI2019_OGMBKCAO_03966) 86166..87377 + 1212 Protein_82 IS3 family transposase ISAlg Transposase
LDO74_RS19740 (NVI2019_OGMBKCAO_03967) 87560..88807 - 1248 WP_282563837.1 hypothetical protein VF
LDO74_RS19745 (NVI2019_OGMBKCAO_03970) 89550..90658 + 1109 WP_224061290.1 IS3 family transposase ISYal1 Transposase
LDO74_RS19750 (NVI2019_OGMBKCAO_03971) 90641..95782 - 5142 WP_263422647.1 hypothetical protein VF
LDO74_RS19755 (NVI2019_OGMBKCAO_03972) 95863..96474 - 612 WP_282563836.1 hypothetical protein VF
LDO74_RS19760 (NVI2019_OGMBKCAO_03973) 97253..98119 - 867 WP_224051081.1 Effector protein YopJ VF
LDO74_RS21270 99196..99318 + 123 WP_282563835.1 hypothetical protein -
LDO74_RS19770 99909..100932 + 1024 Protein_89 IS630 family transposase -
LDO74_RS19775 (NVI2019_OGMBKCAO_03975) 101654..104311 + 2658 WP_224051079.1 Metalloprotease StcE VF
LDO74_RS19780 (NVI2019_OGMBKCAO_03976) 104429..105256 + 828 WP_224051078.1 Type II secretion system protein C VF
LDO74_RS19785 (NVI2019_OGMBKCAO_03977) 105284..107242 + 1959 WP_282563861.1 Secretin PulD VF
LDO74_RS19790 (NVI2019_OGMBKCAO_03978) 107224..108771 + 1548 WP_282563834.1 Type II secretion system protein E VF
LDO74_RS19795 (NVI2019_OGMBKCAO_03979) 108731..109951 + 1221 Protein_94 Type II secretion system protein F VF
LDO74_RS19800 (NVI2019_OGMBKCAO_03980) 110021..110488 + 468 WP_282563860.1 Type II secretion system protein G VF
LDO74_RS19805 (NVI2019_OGMBKCAO_03981) 110443..110997 + 555 WP_282563833.1 Putative type II secretion system protein H VF
LDO74_RS19810 (NVI2019_OGMBKCAO_03982) 110949..111326 + 378 WP_282563832.1 Type II secretion system protein I VF
LDO74_RS19815 (NVI2019_OGMBKCAO_03983) 111311..111904 + 594 WP_224051071.1 Type II secretion system protein J VF
LDO74_RS19820 (NVI2019_OGMBKCAO_03984) 111904..112983 + 1080 WP_282563831.1 Putative type II secretion system protein K VF
LDO74_RS19825 (NVI2019_OGMBKCAO_03985) 112917..114035 + 1119 WP_282563830.1 Type II secretion system protein L VF
LDO74_RS19830 (NVI2019_OGMBKCAO_03986) 114028..114540 + 513 WP_224051125.1 Type II secretion system protein M VF
LDO74_RS19835 (NVI2019_OGMBKCAO_03987) 114650..115453 + 804 WP_282563859.1 Type 4 prepilin-like proteins leader peptide-processing enzyme VF
LDO74_RS19840 (NVI2019_OGMBKCAO_03988) 115501..115890 + 390 WP_224051123.1 type II secretion system pilot lipoprotein GspS -
LDO74_RS19845 (NVI2019_OGMBKCAO_03989) 116555..118243 - 1689 WP_224051122.1 Secreted effector protein SptP VF
LDO74_RS19850 (NVI2019_OGMBKCAO_03990) 118273..118644 - 372 WP_224051121.1 Chaperone protein sicP VF
LDO74_RS19855 (NVI2019_OGMBKCAO_03991) 119012..120223 - 1212 Protein_106 IS3 family transposase ISAlg Transposase
LDO74_RS19860 (NVI2019_OGMBKCAO_03993) 120591..122282 - 1692 WP_224051120.1 putative E3 ubiquitin-protein ligase ipaH7.8 VF
LDO74_RS19870 (NVI2019_OGMBKCAO_03996) 124735..125046 + 312 WP_036978970.1 hypothetical protein -
LDO74_RS19875 (NVI2019_OGMBKCAO_03997) 125125..125424 + 300 WP_036978971.1 hypothetical protein -
LDO74_RS19880 (NVI2019_OGMBKCAO_03998) 125642..126484 + 843 WP_036983325.1 hypothetical protein VF
LDO74_RS19885 (NVI2019_OGMBKCAO_03999) 126643..127050 - 408 WP_282563858.1 hypothetical protein -
LDO74_RS19890 (NVI2019_OGMBKCAO_04000) 127395..127832 - 438 WP_051420274.1 hypothetical protein VF
LDO74_RS19895 (NVI2019_OGMBKCAO_04001) 127757..128518 - 762 WP_282563857.1 Oxygen-regulated invasion protein OrgB VF
LDO74_RS19900 (NVI2019_OGMBKCAO_04002) 128475..129077 - 603 WP_224051119.1 Oxygen-regulated invasion protein OrgA VF
LDO74_RS19905 (NVI2019_OGMBKCAO_04003) 129070..129819 - 750 WP_036978976.1 Lipoprotein PrgK VF
LDO74_RS19910 (NVI2019_OGMBKCAO_04004) 129789..130127 - 339 WP_282563856.1 hypothetical protein VF
LDO74_RS19915 (NVI2019_OGMBKCAO_04005) 130154..130402 - 249 WP_036978978.1 Protein PrgI VF
LDO74_RS19920 (NVI2019_OGMBKCAO_04006) 130423..131664 - 1242 WP_282563855.1 Protein PrgH VF
LDO74_RS19925 (NVI2019_OGMBKCAO_04007) 132001..132645 - 645 WP_224051118.1 hypothetical protein -
LDO74_RS19930 (NVI2019_OGMBKCAO_04008) 132657..133181 - 525 WP_282563854.1 hypothetical protein VF
LDO74_RS19935 (NVI2019_OGMBKCAO_04009) 133192..134871 - 1680 WP_051420271.1 Transcriptional regulator HilA VF
LDO74_RS19940 (NVI2019_OGMBKCAO_04010) 135291..135800 + 510 WP_051420270.1 hypothetical protein VF
LDO74_RS19945 (NVI2019_OGMBKCAO_04011) 135851..136093 - 243 WP_036978984.1 hypothetical protein -
LDO74_RS19950 (NVI2019_OGMBKCAO_04012) 136193..143425 - 7233 WP_224061292.1 hypothetical protein VF
LDO74_RS19955 (NVI2019_OGMBKCAO_04013) 143446..144513 - 1068 WP_051420269.1 Cell invasion protein SipD VF
LDO74_RS19960 (NVI2019_OGMBKCAO_04014) 144608..145834 - 1227 WP_036979257.1 Cell invasion protein SipC VF
LDO74_RS19965 (NVI2019_OGMBKCAO_04015) 145859..147637 - 1779 WP_051420268.1 Cell invasion protein SipB VF
LDO74_RS19970 (NVI2019_OGMBKCAO_04016) 147640..148140 - 501 WP_036979256.1 Chaperone protein SicA VF
LDO74_RS19975 (NVI2019_OGMBKCAO_04017) 148280..149341 - 1062 WP_282490723.1 Surface presentation of antigens protein SpaS VF
LDO74_RS19980 (NVI2019_OGMBKCAO_04018) 149268..150386 - 1119 WP_282563853.1 Surface presentation of antigens protein SpaR VF
LDO74_RS19990 (NVI2019_OGMBKCAO_04020) 150425..151087 - 663 Protein_131 Surface presentation of antigens protein SpaP VF
LDO74_RS19995 (NVI2019_OGMBKCAO_04021) 151090..151995 - 906 WP_036979254.1 Surface presentation of antigens protein SpaO VF
LDO74_RS20000 (NVI2019_OGMBKCAO_04022) 151995..152891 - 897 WP_224051116.1 hypothetical protein VF
LDO74_RS20005 (NVI2019_OGMBKCAO_04023) 152879..153334 - 456 WP_036961022.1 hypothetical protein VF
LDO74_RS20010 (NVI2019_OGMBKCAO_04024) 153321..154607 - 1287 WP_036979250.1 putative ATP synthase SpaL VF
LDO74_RS20015 (NVI2019_OGMBKCAO_04025) 154544..155011 - 468 WP_282563852.1 Surface presentation of antigens protein SpaK VF
LDO74_RS20020 (NVI2019_OGMBKCAO_04026) 155029..157119 - 2091 WP_036979247.1 Invasion protein InvA VF
LDO74_RS20025 (NVI2019_OGMBKCAO_04027) 157157..158266 - 1110 WP_036961031.1 Protein MxiC VF
LDO74_RS20030 (NVI2019_OGMBKCAO_04028) 158256..159983 - 1728 WP_036979259.1 Type 3 secretion system secretin VF
LDO74_RS20035 (NVI2019_OGMBKCAO_04029) 159973..160734 - 762 WP_036979246.1 Invasion protein InvF VF
LDO74_RS20040 161329..161540 + 212 Protein_141 IS3 family transposase -
LDO74_RS20045 (NVI2019_OGMBKCAO_04030) 162270..163127 - 858 WP_224051114.1 hypothetical protein -
LDO74_RS20050 (NVI2019_OGMBKCAO_04031) 163295..164240 + 946 Protein_143 IS3 family transposase IS911 Transposase
LDO74_RS20055 (NVI2019_OGMBKCAO_04033) 164310..165418 + 1109 WP_224061290.1 IS3 family transposase ISYal1 Transposase
LDO74_RS20060 165481..166062 + 582 Protein_145 transposase -
LDO74_RS20065 166056..166181 + 126 Protein_146 IS200/IS605 family transposase -
LDO74_RS20070 (NVI2019_OGMBKCAO_04034) 166793..167164 + 372 WP_036979473.1 Chaperone protein sicP VF
LDO74_RS20075 (NVI2019_OGMBKCAO_04035) 167194..168885 + 1692 WP_224051113.1 Secreted effector protein SptP VF
LDO74_RS20080 (NVI2019_OGMBKCAO_04036) 168969..170123 + 1155 WP_155250252.1 hypothetical protein VF

Similar MGE(s)


Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.

Detail Organism MGE type Related TA Genome accession Coordinates Mash
distance