MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 171426 bp
Accession: NZ_OU659132 Location: 1..171426 Organism: Providencia alcalifaciens strain 2019-04-28370-1-5 isolate 2019-04-28370-1-5 Replicon: plasmid 3
Accession: NZ_OU659132 Location: 1..171426 Organism: Providencia alcalifaciens strain 2019-04-28370-1-5 isolate 2019-04-28370-1-5 Replicon: plasmid 3
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LDO77_RS19300 | 529..657 | - | 129 | WP_224051107.1 | helix-turn-helix domain-containing protein | - |
| LDO77_RS19305 | 634..858 | + | 225 | Protein_2 | zinc ribbon domain-containing protein | - |
| LDO77_RS19310 (NVI2019_OHEONHNH_03875) | 1875..2624 | + | 750 | WP_224051108.1 | hypothetical protein | VF |
| LDO77_RS19315 | 2645..3456 | + | 812 | Protein_4 | Cytolethal distending toxin subunit B | VF |
| LDO77_RS19320 (NVI2019_OHEONHNH_03878) | 3471..4019 | + | 549 | WP_224051109.1 | hypothetical protein | VF |
| LDO77_RS19325 | 5360..6308 | + | 949 | Protein_6 | Rpn family recombination-promoting nuclease/putative transposase | - |
| LDO77_RS19330 (NVI2019_OHEONHNH_03882) | 6552..8198 | - | 1647 | WP_224051110.1 | lipid IV(A) 4-amino-4-deoxy-L-arabinosyltransferase | - |
| LDO77_RS19335 (NVI2019_OHEONHNH_03883) | 9154..10101 | + | 948 | WP_224051111.1 | ISNCY family transposase ISPlu15 | VF |
| LDO77_RS19340 | 11186..11386 | + | 201 | WP_154635416.1 | zinc ribbon domain-containing protein | - |
| LDO77_RS19345 (NVI2019_OHEONHNH_03884) | 11951..12676 | + | 726 | WP_051420265.1 | tyrosine-type recombinase/integrase | - |
| LDO77_RS19350 (NVI2019_OHEONHNH_03885) | 13512..14726 | + | 1215 | WP_224051126.1 | AAA family ATPase | - |
| LDO77_RS19355 (NVI2019_OHEONHNH_03886) | 14716..15714 | + | 999 | WP_282563851.1 | ParB family protein | - |
| LDO77_RS19360 (NVI2019_OHEONHNH_03887) | 15901..16839 | + | 939 | WP_051420266.1 | RepA family replication protein | - |
| LDO77_RS19365 | 17662..18556 | - | 895 | Protein_14 | DDE-type integrase/transposase/recombinase | - |
| LDO77_RS19370 | 18610..18833 | - | 224 | Protein_15 | transposase | - |
| LDO77_RS19375 (NVI2019_OHEONHNH_03890) | 19453..28431 | + | 8979 | WP_224051112.1 | TcdA/TcdB catalytic glycosyltransferase domain-containing protein | - |
| LDO77_RS19380 | 28521..28808 | - | 288 | Protein_17 | IS3 family transposase ISBrsa1 | Transposase |
| LDO77_RS19385 (NVI2019_OHEONHNH_03892) | 28875..29983 | + | 1109 | WP_224051127.1 | IS3 family transposase ISYal1 | Transposase |
| LDO77_RS19390 (NVI2019_OHEONHNH_03893) | 30083..31237 | - | 1155 | WP_155250252.1 | hypothetical protein | VF |
| LDO77_RS19395 (NVI2019_OHEONHNH_03894) | 31321..33012 | - | 1692 | WP_224051113.1 | Secreted effector protein SptP | VF |
| LDO77_RS19400 (NVI2019_OHEONHNH_03895) | 33042..33413 | - | 372 | WP_036979473.1 | Chaperone protein sicP | VF |
| LDO77_RS19405 | 34025..34150 | - | 126 | Protein_22 | IS200/IS605 family transposase | - |
| LDO77_RS19410 | 34144..34725 | - | 582 | Protein_23 | transposase | - |
| LDO77_RS19420 (NVI2019_OHEONHNH_03898) | 35966..36911 | - | 946 | Protein_25 | IS3 family transposase IS911 | Transposase |
| LDO77_RS19425 (NVI2019_OHEONHNH_03899) | 37079..37936 | + | 858 | WP_224051114.1 | hypothetical protein | - |
| LDO77_RS19430 | 38666..38877 | - | 212 | Protein_27 | IS3 family transposase | - |
| LDO77_RS19435 (NVI2019_OHEONHNH_03900) | 39472..40233 | + | 762 | WP_036979246.1 | Invasion protein InvF | VF |
| LDO77_RS19440 (NVI2019_OHEONHNH_03901) | 40223..41950 | + | 1728 | WP_036979259.1 | Type 3 secretion system secretin | VF |
| LDO77_RS19445 (NVI2019_OHEONHNH_03902) | 41940..43049 | + | 1110 | WP_036961031.1 | Protein MxiC | VF |
| LDO77_RS19450 (NVI2019_OHEONHNH_03903) | 43087..45177 | + | 2091 | WP_036979247.1 | Invasion protein InvA | VF |
| LDO77_RS19455 (NVI2019_OHEONHNH_03904) | 45195..45662 | + | 468 | WP_282563852.1 | Surface presentation of antigens protein SpaK | VF |
| LDO77_RS19460 (NVI2019_OHEONHNH_03905) | 45599..46885 | + | 1287 | WP_036979250.1 | putative ATP synthase SpaL | VF |
| LDO77_RS19465 (NVI2019_OHEONHNH_03906) | 46872..47327 | + | 456 | WP_036961022.1 | hypothetical protein | VF |
| LDO77_RS19470 (NVI2019_OHEONHNH_03907) | 47315..48211 | + | 897 | WP_224051116.1 | hypothetical protein | VF |
| LDO77_RS19475 (NVI2019_OHEONHNH_03908) | 48211..49116 | + | 906 | WP_036979254.1 | Surface presentation of antigens protein SpaO | VF |
| LDO77_RS19480 (NVI2019_OHEONHNH_03909) | 49119..49781 | + | 663 | Protein_37 | Surface presentation of antigens protein SpaP | VF |
| LDO77_RS19490 (NVI2019_OHEONHNH_03911) | 49820..50938 | + | 1119 | WP_282563853.1 | Surface presentation of antigens protein SpaR | VF |
| LDO77_RS19495 (NVI2019_OHEONHNH_03912) | 50865..51926 | + | 1062 | WP_282490723.1 | Surface presentation of antigens protein SpaS | VF |
| LDO77_RS19500 (NVI2019_OHEONHNH_03913) | 52066..52566 | + | 501 | WP_036979256.1 | Chaperone protein SicA | VF |
| LDO77_RS19505 (NVI2019_OHEONHNH_03914) | 52569..54347 | + | 1779 | WP_051420268.1 | Cell invasion protein SipB | VF |
| LDO77_RS19510 (NVI2019_OHEONHNH_03915) | 54372..55598 | + | 1227 | WP_036979257.1 | Cell invasion protein SipC | VF |
| LDO77_RS19515 (NVI2019_OHEONHNH_03916) | 55693..56760 | + | 1068 | WP_051420269.1 | Cell invasion protein SipD | VF |
| LDO77_RS19520 (NVI2019_OHEONHNH_03917) | 56781..64013 | + | 7233 | WP_224051117.1 | hypothetical protein | VF |
| LDO77_RS19525 (NVI2019_OHEONHNH_03918) | 64113..64355 | + | 243 | WP_036978984.1 | hypothetical protein | - |
| LDO77_RS19530 (NVI2019_OHEONHNH_03919) | 64406..64915 | - | 510 | WP_051420270.1 | hypothetical protein | VF |
| LDO77_RS19535 (NVI2019_OHEONHNH_03920) | 65335..67014 | + | 1680 | WP_051420271.1 | Transcriptional regulator HilA | VF |
| LDO77_RS19540 (NVI2019_OHEONHNH_03921) | 67025..67549 | + | 525 | WP_282563854.1 | hypothetical protein | VF |
| LDO77_RS19545 (NVI2019_OHEONHNH_03922) | 67561..68205 | + | 645 | WP_224051118.1 | hypothetical protein | - |
| LDO77_RS19550 (NVI2019_OHEONHNH_03923) | 68542..69783 | + | 1242 | WP_282563855.1 | Protein PrgH | VF |
| LDO77_RS19555 (NVI2019_OHEONHNH_03924) | 69804..70052 | + | 249 | WP_036978978.1 | Protein PrgI | VF |
| LDO77_RS19560 (NVI2019_OHEONHNH_03925) | 70079..70417 | + | 339 | WP_282563856.1 | hypothetical protein | VF |
| LDO77_RS19565 (NVI2019_OHEONHNH_03926) | 70387..71136 | + | 750 | WP_036978976.1 | Lipoprotein PrgK | VF |
| LDO77_RS19570 (NVI2019_OHEONHNH_03927) | 71129..71731 | + | 603 | WP_224051119.1 | Oxygen-regulated invasion protein OrgA | VF |
| LDO77_RS19575 (NVI2019_OHEONHNH_03928) | 71688..72449 | + | 762 | WP_282563857.1 | Oxygen-regulated invasion protein OrgB | VF |
| LDO77_RS19580 (NVI2019_OHEONHNH_03929) | 72374..72811 | + | 438 | WP_051420274.1 | hypothetical protein | VF |
| LDO77_RS19585 (NVI2019_OHEONHNH_03930) | 73156..73563 | + | 408 | WP_282563858.1 | hypothetical protein | - |
| LDO77_RS19590 (NVI2019_OHEONHNH_03931) | 73722..74564 | - | 843 | WP_036983325.1 | hypothetical protein | VF |
| LDO77_RS19595 (NVI2019_OHEONHNH_03932) | 74782..75081 | - | 300 | WP_036978971.1 | hypothetical protein | - |
| LDO77_RS19600 (NVI2019_OHEONHNH_03933) | 75160..75471 | - | 312 | WP_036978970.1 | hypothetical protein | - |
| LDO77_RS19610 (NVI2019_OHEONHNH_03936) | 77924..79615 | + | 1692 | WP_224051120.1 | putative E3 ubiquitin-protein ligase ipaH7.8 | VF |
| LDO77_RS19615 (NVI2019_OHEONHNH_03938) | 79983..81194 | + | 1212 | Protein_62 | IS3 family transposase ISAlg | Transposase |
| LDO77_RS19620 (NVI2019_OHEONHNH_03939) | 81562..81933 | + | 372 | WP_224051121.1 | Chaperone protein sicP | VF |
| LDO77_RS19625 (NVI2019_OHEONHNH_03940) | 81963..83651 | + | 1689 | WP_224051122.1 | Secreted effector protein SptP | VF |
| LDO77_RS19630 (NVI2019_OHEONHNH_03941) | 84316..84705 | - | 390 | WP_224051123.1 | type II secretion system pilot lipoprotein GspS | - |
| LDO77_RS19635 (NVI2019_OHEONHNH_03942) | 84753..85556 | - | 804 | WP_282563859.1 | Type 4 prepilin-like proteins leader peptide-processing enzyme | VF |
| LDO77_RS19640 (NVI2019_OHEONHNH_03943) | 85666..86178 | - | 513 | WP_224051125.1 | Type II secretion system protein M | VF |
| LDO77_RS19645 (NVI2019_OHEONHNH_03944) | 86171..87289 | - | 1119 | WP_282563830.1 | Type II secretion system protein L | VF |
| LDO77_RS19650 (NVI2019_OHEONHNH_03945) | 87223..88302 | - | 1080 | WP_282563831.1 | Putative type II secretion system protein K | VF |
| LDO77_RS19655 (NVI2019_OHEONHNH_03946) | 88302..88895 | - | 594 | WP_224051071.1 | Type II secretion system protein J | VF |
| LDO77_RS19660 (NVI2019_OHEONHNH_03947) | 88880..89257 | - | 378 | WP_282563832.1 | Type II secretion system protein I | VF |
| LDO77_RS19665 (NVI2019_OHEONHNH_03948) | 89209..89763 | - | 555 | WP_282563833.1 | Putative type II secretion system protein H | VF |
| LDO77_RS19670 (NVI2019_OHEONHNH_03949) | 89718..90185 | - | 468 | WP_282563860.1 | Type II secretion system protein G | VF |
| LDO77_RS19675 (NVI2019_OHEONHNH_03950) | 90255..91475 | - | 1221 | Protein_74 | Type II secretion system protein F | VF |
| LDO77_RS19680 (NVI2019_OHEONHNH_03951) | 91435..92982 | - | 1548 | WP_282563834.1 | Type II secretion system protein E | VF |
| LDO77_RS19685 (NVI2019_OHEONHNH_03952) | 92964..94922 | - | 1959 | WP_282563861.1 | Secretin PulD | VF |
| LDO77_RS19690 (NVI2019_OHEONHNH_03953) | 94950..95777 | - | 828 | WP_224051078.1 | Type II secretion system protein C | VF |
| LDO77_RS19695 (NVI2019_OHEONHNH_03954) | 95895..98552 | - | 2658 | WP_224051079.1 | Metalloprotease StcE | VF |
| LDO77_RS19700 | 99274..100297 | - | 1024 | Protein_79 | IS630 family transposase | - |
| LDO77_RS21255 | 100888..101010 | - | 123 | WP_282563835.1 | hypothetical protein | - |
| LDO77_RS19710 (NVI2019_OHEONHNH_03956) | 102087..102953 | + | 867 | WP_224051081.1 | Effector protein YopJ | VF |
| LDO77_RS19715 (NVI2019_OHEONHNH_03957) | 103732..104343 | + | 612 | WP_282563836.1 | hypothetical protein | VF |
| LDO77_RS19720 (NVI2019_OHEONHNH_03958) | 104424..109565 | + | 5142 | WP_263422647.1 | hypothetical protein | VF |
| LDO77_RS19730 (NVI2019_OHEONHNH_03962) | 111399..112646 | + | 1248 | WP_282563837.1 | hypothetical protein | VF |
| LDO77_RS19735 (NVI2019_OHEONHNH_03963) | 112829..114040 | - | 1212 | Protein_86 | IS3 family transposase ISAlg | Transposase |
| LDO77_RS19740 (NVI2019_OHEONHNH_03965) | 114064..115290 | - | 1227 | WP_282563838.1 | hypothetical protein | VF |
| LDO77_RS19745 | 116200..117146 | + | 947 | Protein_88 | IS3 family transposase | - |
| LDO77_RS19750 | 117161..117412 | + | 252 | Protein_89 | helix-turn-helix domain-containing protein | - |
| LDO77_RS19755 (NVI2019_OHEONHNH_03966) | 117812..118090 | - | 279 | WP_036979198.1 | ribbon-helix-helix protein, CopG family | - |
| LDO77_RS19760 (NVI2019_OHEONHNH_03967) | 118042..118728 | - | 687 | WP_282563839.1 | AAA family ATPase | - |
| LDO77_RS19765 (NVI2019_OHEONHNH_03969) | 119331..120542 | + | 1212 | Protein_92 | IS3 family transposase ISAlg | Transposase |
| LDO77_RS19770 (NVI2019_OHEONHNH_03970) | 120588..120935 | + | 348 | WP_051420173.1 | ParB/Srx family N-terminal domain-containing protein | - |
| LDO77_RS21080 | 120956..121078 | + | 123 | WP_263422648.1 | hypothetical protein | - |
| LDO77_RS19775 (NVI2019_OHEONHNH_03971) | 121433..121729 | + | 297 | WP_282563840.1 | hypothetical protein | - |
| LDO77_RS19780 (NVI2019_OHEONHNH_03972) | 121672..122205 | + | 534 | WP_282563841.1 | type-F conjugative transfer system pilin assembly protein TraF | - |
| LDO77_RS19785 | 122205..122629 | + | 425 | Protein_97 | recombinase family protein | - |
| LDO77_RS19790 (NVI2019_OHEONHNH_03974) | 122801..123052 | + | 252 | WP_036974972.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| LDO77_RS19795 (NVI2019_OHEONHNH_03975) | 123042..123323 | + | 282 | WP_036974970.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| LDO77_RS19800 | 123552..123854 | + | 303 | Protein_100 | Tn3 family transposase TnpR_ISYps3 | Transposase |
| LDO77_RS19810 (NVI2019_OHEONHNH_03977) | 124099..124368 | + | 270 | WP_036979554.1 | plasmid partitioning/stability family protein | - |
| LDO77_RS19815 (NVI2019_OHEONHNH_03978) | 124563..124841 | + | 279 | WP_230087585.1 | S24 family peptidase | - |
| LDO77_RS19820 (NVI2019_OHEONHNH_03979) | 124954..126222 | + | 1269 | WP_036979530.1 | translesion error-prone DNA polymerase V subunit UmuC | - |
| LDO77_RS19825 (NVI2019_OHEONHNH_03980) | 126429..126755 | + | 327 | WP_036979532.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| LDO77_RS19830 (NVI2019_OHEONHNH_03981) | 126742..127014 | + | 273 | WP_036979555.1 | helix-turn-helix transcriptional regulator | - |
| LDO77_RS19835 (NVI2019_OHEONHNH_03982) | 127109..127318 | + | 210 | WP_036979533.1 | hypothetical protein | - |
| LDO77_RS19840 (NVI2019_OHEONHNH_03983) | 128074..128325 | + | 252 | WP_036979535.1 | hypothetical protein | - |
| LDO77_RS19845 (NVI2019_OHEONHNH_03984) | 128367..128729 | + | 363 | WP_282563842.1 | hypothetical protein | - |
| LDO77_RS19850 (NVI2019_OHEONHNH_03985) | 128797..129039 | + | 243 | WP_224055086.1 | hypothetical protein | - |
| LDO77_RS19855 (NVI2019_OHEONHNH_03986) | 129083..129529 | + | 447 | WP_051459499.1 | hypothetical protein | - |
| LDO77_RS19860 (NVI2019_OHEONHNH_03987) | 129560..129892 | + | 333 | WP_051420258.1 | N-6 DNA methylase | - |
| LDO77_RS19865 (NVI2019_OHEONHNH_03988) | 130261..130536 | - | 276 | WP_036979539.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| LDO77_RS19870 (NVI2019_OHEONHNH_03989) | 130475..130768 | - | 294 | WP_282563844.1 | DUF6290 family protein | - |
| LDO77_RS19875 | 131332..131756 | - | 425 | Protein_114 | transglycosylase SLT domain-containing protein | - |
| LDO77_RS19880 (NVI2019_OHEONHNH_03991) | 132223..132483 | + | 261 | WP_051420257.1 | relaxosome protein TraM | - |
| LDO77_RS19885 | 132740..132955 | + | 216 | WP_282563845.1 | hypothetical protein | - |
| LDO77_RS19890 (NVI2019_OHEONHNH_03992) | 133835..134026 | + | 192 | WP_036979543.1 | TraY domain-containing protein | - |
| LDO77_RS19895 (NVI2019_OHEONHNH_03993) | 134352..134648 | + | 297 | WP_282563846.1 | type IV conjugative transfer system pilin TraA | - |
| LDO77_RS19900 (NVI2019_OHEONHNH_03994) | 134670..134975 | + | 306 | WP_036979544.1 | type IV conjugative transfer system protein TraL | - |
| LDO77_RS19905 (NVI2019_OHEONHNH_03995) | 134990..135559 | + | 570 | WP_224051089.1 | type IV conjugative transfer system protein TraE | - |
| LDO77_RS19910 (NVI2019_OHEONHNH_03997) | 135788..136135 | + | 348 | WP_224051090.1 | hypothetical protein | - |
| LDO77_RS21260 | 136248..136748 | + | 501 | Protein_122 | TrbI/VirB10 family protein | - |
| LDO77_RS19925 (NVI2019_OHEONHNH_04000) | 137160..137647 | + | 488 | Protein_123 | transcription/translation regulatory transformer protein RfaH | - |
| LDO77_RS19930 (NVI2019_OHEONHNH_04001) | 137761..138102 | + | 342 | WP_224051091.1 | TraV family lipoprotein | - |
| LDO77_RS19935 (NVI2019_OHEONHNH_04002) | 138104..140461 | + | 2358 | WP_224051092.1 | type IV secretion system protein TraC | - |
| LDO77_RS19940 (NVI2019_OHEONHNH_04003) | 140489..140815 | + | 327 | WP_224051093.1 | hypothetical protein | - |
| LDO77_RS19945 (NVI2019_OHEONHNH_04004) | 140791..141216 | + | 426 | WP_071992439.1 | type-F conjugative transfer system protein TrbI | - |
| LDO77_RS19950 | 141227..141868 | + | 642 | Protein_128 | type-F conjugative transfer system protein TraW | - |
| LDO77_RS19955 (NVI2019_OHEONHNH_04007) | 141856..142851 | + | 996 | Protein_129 | conjugal transfer pilus assembly protein TraU | - |
| LDO77_RS19960 (NVI2019_OHEONHNH_04009) | 142866..143501 | + | 636 | WP_282563847.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| LDO77_RS19965 (NVI2019_OHEONHNH_04010) | 143483..144310 | + | 828 | WP_051420221.1 | hypothetical protein | - |
| LDO77_RS19970 (NVI2019_OHEONHNH_04011) | 144500..145351 | + | 852 | WP_282563862.1 | conjugal transfer protein TraN | - |
| LDO77_RS19975 (NVI2019_OHEONHNH_04012) | 145321..145617 | + | 297 | WP_282563840.1 | hypothetical protein | - |
| LDO77_RS19980 (NVI2019_OHEONHNH_04013) | 145560..146093 | + | 534 | WP_282563841.1 | type-F conjugative transfer system pilin assembly protein TraF | - |
| LDO77_RS19985 | 146125..146406 | + | 282 | WP_036978103.1 | hypothetical protein | - |
| LDO77_RS20000 (NVI2019_OHEONHNH_04015) | 146934..147212 | + | 279 | WP_036978105.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| LDO77_RS20005 (NVI2019_OHEONHNH_04016) | 147212..147526 | + | 315 | WP_036978107.1 | HigA family addiction module antitoxin | Antitoxin Detail |
| LDO77_RS20015 (NVI2019_OHEONHNH_04019) | 148608..149716 | + | 1109 | Protein_138 | conjugal transfer protein TraH | - |
| LDO77_RS20025 | 151129..152270 | - | 1142 | Protein_139 | IS256 family transposase | - |
| LDO77_RS20035 (NVI2019_OHEONHNH_04024) | 152940..153503 | - | 564 | WP_224051097.1 | hypothetical protein | - |
| LDO77_RS20040 (NVI2019_OHEONHNH_04025) | 153513..154709 | - | 1197 | WP_224051098.1 | hypothetical protein | - |
| LDO77_RS20045 (NVI2019_OHEONHNH_04026) | 154727..157378 | - | 2652 | WP_224051099.1 | Outer membrane usher protein FimD | VF |
| LDO77_RS20050 (NVI2019_OHEONHNH_04027) | 157335..158063 | - | 729 | WP_224051100.1 | molecular chaperone | - |
| LDO77_RS20055 (NVI2019_OHEONHNH_04028) | 158079..158750 | - | 672 | WP_224051101.1 | Chaperone protein FimC | VF |
| LDO77_RS20060 (NVI2019_OHEONHNH_04029) | 158824..159363 | - | 540 | WP_224051102.1 | fimbrial protein | - |
| LDO77_RS20065 (NVI2019_OHEONHNH_04031) | 159917..160264 | + | 348 | WP_282563848.1 | hypothetical protein | - |
| LDO77_RS20070 (NVI2019_OHEONHNH_04032) | 160237..160449 | + | 213 | WP_224051104.1 | hypothetical protein | - |
| LDO77_RS20075 (NVI2019_OHEONHNH_04033) | 160526..161017 | + | 492 | WP_282564879.1 | Fic family protein | - |
| LDO77_RS20080 | 161066..162207 | - | 1142 | Protein_149 | IS256 family transposase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|