NZ_OU6591211..171405

MGE detailed information

MGE type: Non-Mobilizable plasmid        MGE length: 171405 bp
Accession: NZ_OU659121        Location: 1..171405         Organism: Providencia alcalifaciens strain 2019-04-28369-1-2 isolate 2019-04-28369-1-2       Replicon: plasmid 2


Gene structure


The 5 kb flanking regions of this MGE are displayed.

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
LDO76_RS19300 529..657 - 129 WP_224051107.1 helix-turn-helix domain-containing protein -
LDO76_RS19305 634..858 + 225 Protein_1 zinc ribbon domain-containing protein -
LDO76_RS19310 (NVI2019_PLFLNFOB_03875) 1875..2624 + 750 WP_224051108.1 hypothetical protein VF
LDO76_RS19315 2645..3456 + 812 Protein_3 Cytolethal distending toxin subunit B VF
LDO76_RS19320 (NVI2019_PLFLNFOB_03878) 3471..4019 + 549 WP_224051109.1 hypothetical protein VF
LDO76_RS19325 5360..6308 + 949 Protein_5 ISNCY family transposase ISPlu22 Transposase
LDO76_RS19330 (NVI2019_PLFLNFOB_03882) 6552..8198 - 1647 WP_224051110.1 lipid IV(A) 4-amino-4-deoxy-L-arabinosyltransferase -
LDO76_RS19335 (NVI2019_PLFLNFOB_03883) 9154..10101 + 948 WP_224051111.1 ISNCY family transposase ISPlu15 VF
LDO76_RS19340 11186..11386 + 201 WP_154635416.1 zinc ribbon domain-containing protein -
LDO76_RS19345 (NVI2019_PLFLNFOB_03884) 11951..12676 + 726 WP_051420265.1 tyrosine-type recombinase/integrase -
LDO76_RS19350 (NVI2019_PLFLNFOB_03885) 13512..14726 + 1215 WP_224051126.1 AAA family ATPase -
LDO76_RS19355 (NVI2019_PLFLNFOB_03886) 14716..15714 + 999 WP_282563851.1 ParB family protein -
LDO76_RS19360 (NVI2019_PLFLNFOB_03887) 15901..16839 + 939 WP_051420266.1 RepA family replication protein -
LDO76_RS19365 17662..18556 - 895 Protein_13 DDE-type integrase/transposase/recombinase -
LDO76_RS19370 18610..18833 - 224 Protein_14 transposase -
LDO76_RS19375 (NVI2019_PLFLNFOB_03890) 19453..28431 + 8979 WP_224051112.1 TcdA/TcdB catalytic glycosyltransferase domain-containing protein -
LDO76_RS19380 28521..28808 - 288 Protein_16 IS3 family transposase ISBrsa1 Transposase
LDO76_RS19385 (NVI2019_PLFLNFOB_03892) 28875..29983 + 1109 WP_155250254.1 IS3 family transposase ISYal1 Transposase
LDO76_RS19390 (NVI2019_PLFLNFOB_03893) 30083..31237 - 1155 WP_155250252.1 hypothetical protein VF
LDO76_RS19395 (NVI2019_PLFLNFOB_03894) 31321..33012 - 1692 WP_224051113.1 Secreted effector protein SptP VF
LDO76_RS19400 (NVI2019_PLFLNFOB_03895) 33042..33413 - 372 WP_036979473.1 Chaperone protein sicP VF
LDO76_RS19405 34025..34150 - 126 Protein_21 IS200/IS605 family transposase -
LDO76_RS19410 34144..34725 - 582 Protein_22 transposase -
LDO76_RS19420 (NVI2019_PLFLNFOB_03898) 35966..36911 - 946 Protein_24 IS3 family transposase IS911 Transposase
LDO76_RS19425 (NVI2019_PLFLNFOB_03899) 37296..37943 + 648 WP_224061291.1 hypothetical protein -
LDO76_RS19430 38673..38884 - 212 Protein_26 IS3 family transposase -
LDO76_RS19435 (NVI2019_PLFLNFOB_03900) 39479..40240 + 762 WP_036979246.1 Invasion protein InvF VF
LDO76_RS19440 (NVI2019_PLFLNFOB_03901) 40230..41957 + 1728 WP_036979259.1 Type 3 secretion system secretin VF
LDO76_RS19445 (NVI2019_PLFLNFOB_03902) 41947..43056 + 1110 WP_036961031.1 Protein MxiC VF
LDO76_RS19450 (NVI2019_PLFLNFOB_03903) 43094..45184 + 2091 WP_036979247.1 Invasion protein InvA VF
LDO76_RS19455 (NVI2019_PLFLNFOB_03904) 45202..45669 + 468 WP_282563852.1 Surface presentation of antigens protein SpaK VF
LDO76_RS19460 (NVI2019_PLFLNFOB_03905) 45606..46892 + 1287 WP_036979250.1 putative ATP synthase SpaL VF
LDO76_RS19465 (NVI2019_PLFLNFOB_03906) 46879..47334 + 456 WP_036961022.1 hypothetical protein VF
LDO76_RS19470 (NVI2019_PLFLNFOB_03907) 47322..48218 + 897 WP_224051116.1 hypothetical protein VF
LDO76_RS19475 (NVI2019_PLFLNFOB_03908) 48218..49123 + 906 WP_036979254.1 Surface presentation of antigens protein SpaO VF
LDO76_RS19480 (NVI2019_PLFLNFOB_03909) 49126..49788 + 663 Protein_36 Surface presentation of antigens protein SpaP VF
LDO76_RS19490 (NVI2019_PLFLNFOB_03911) 49827..50945 + 1119 WP_282563853.1 Surface presentation of antigens protein SpaR VF
LDO76_RS19495 (NVI2019_PLFLNFOB_03912) 50872..51933 + 1062 WP_282490723.1 Surface presentation of antigens protein SpaS VF
LDO76_RS19500 (NVI2019_PLFLNFOB_03913) 52073..52573 + 501 WP_036979256.1 Chaperone protein SicA VF
LDO76_RS19505 (NVI2019_PLFLNFOB_03914) 52576..54354 + 1779 WP_051420268.1 Cell invasion protein SipB VF
LDO76_RS19510 (NVI2019_PLFLNFOB_03915) 54379..55605 + 1227 WP_036979257.1 Cell invasion protein SipC VF
LDO76_RS19515 (NVI2019_PLFLNFOB_03916) 55700..56767 + 1068 WP_051420269.1 Cell invasion protein SipD VF
LDO76_RS19520 (NVI2019_PLFLNFOB_03917) 56788..64020 + 7233 WP_224061292.1 hypothetical protein VF
LDO76_RS19525 (NVI2019_PLFLNFOB_03918) 64120..64362 + 243 WP_036978984.1 hypothetical protein -
LDO76_RS19530 (NVI2019_PLFLNFOB_03919) 64413..64922 - 510 WP_051420270.1 hypothetical protein VF
LDO76_RS19535 (NVI2019_PLFLNFOB_03920) 65342..67021 + 1680 WP_051420271.1 Transcriptional regulator HilA VF
LDO76_RS19540 (NVI2019_PLFLNFOB_03921) 67032..67556 + 525 WP_282563854.1 hypothetical protein VF
LDO76_RS19545 (NVI2019_PLFLNFOB_03922) 67568..68212 + 645 WP_224051118.1 hypothetical protein -
LDO76_RS19550 (NVI2019_PLFLNFOB_03923) 68549..69790 + 1242 WP_282563855.1 Protein PrgH VF
LDO76_RS19555 (NVI2019_PLFLNFOB_03924) 69811..70059 + 249 WP_036978978.1 Protein PrgI VF
LDO76_RS19560 (NVI2019_PLFLNFOB_03925) 70086..70424 + 339 WP_282563856.1 hypothetical protein VF
LDO76_RS19565 (NVI2019_PLFLNFOB_03926) 70394..71143 + 750 WP_036978976.1 Lipoprotein PrgK VF
LDO76_RS19570 (NVI2019_PLFLNFOB_03927) 71136..71738 + 603 WP_224051119.1 Oxygen-regulated invasion protein OrgA VF
LDO76_RS19575 (NVI2019_PLFLNFOB_03928) 71695..72456 + 762 WP_282563857.1 Oxygen-regulated invasion protein OrgB VF
LDO76_RS19580 (NVI2019_PLFLNFOB_03929) 72381..72818 + 438 WP_051420274.1 hypothetical protein VF
LDO76_RS19585 (NVI2019_PLFLNFOB_03930) 73163..73570 + 408 WP_282563858.1 hypothetical protein -
LDO76_RS19590 (NVI2019_PLFLNFOB_03931) 73729..74571 - 843 WP_036983325.1 hypothetical protein VF
LDO76_RS19595 (NVI2019_PLFLNFOB_03932) 74789..75088 - 300 WP_036978971.1 hypothetical protein -
LDO76_RS19600 (NVI2019_PLFLNFOB_03933) 75167..75478 - 312 WP_036978970.1 hypothetical protein -
LDO76_RS19610 (NVI2019_PLFLNFOB_03936) 77931..79622 + 1692 WP_224051120.1 putative E3 ubiquitin-protein ligase ipaH7.8 VF
LDO76_RS19615 (NVI2019_PLFLNFOB_03938) 79990..81201 + 1212 Protein_61 IS3 family transposase ISAlg Transposase
LDO76_RS19620 (NVI2019_PLFLNFOB_03939) 81569..81940 + 372 WP_224051121.1 Chaperone protein sicP VF
LDO76_RS19625 (NVI2019_PLFLNFOB_03940) 81970..83658 + 1689 WP_224051122.1 Secreted effector protein SptP VF
LDO76_RS19630 (NVI2019_PLFLNFOB_03941) 84323..84712 - 390 WP_224051123.1 type II secretion system pilot lipoprotein GspS -
LDO76_RS19635 (NVI2019_PLFLNFOB_03942) 84760..85563 - 804 WP_282563859.1 Type 4 prepilin-like proteins leader peptide-processing enzyme VF
LDO76_RS19640 (NVI2019_PLFLNFOB_03943) 85673..86185 - 513 WP_224051125.1 Type II secretion system protein M VF
LDO76_RS19645 (NVI2019_PLFLNFOB_03944) 86178..87296 - 1119 WP_282563830.1 Type II secretion system protein L VF
LDO76_RS19650 (NVI2019_PLFLNFOB_03945) 87230..88309 - 1080 WP_282563831.1 Putative type II secretion system protein K VF
LDO76_RS19655 (NVI2019_PLFLNFOB_03946) 88309..88902 - 594 WP_224051071.1 Type II secretion system protein J VF
LDO76_RS19660 (NVI2019_PLFLNFOB_03947) 88887..89264 - 378 WP_282563832.1 Type II secretion system protein I VF
LDO76_RS19665 (NVI2019_PLFLNFOB_03948) 89216..89770 - 555 WP_282563833.1 Putative type II secretion system protein H VF
LDO76_RS19670 (NVI2019_PLFLNFOB_03949) 89725..90234 - 510 WP_282564490.1 Type II secretion system protein G VF
LDO76_RS19675 (NVI2019_PLFLNFOB_03950) 90262..91482 - 1221 Protein_73 Type II secretion system protein F VF
LDO76_RS19680 (NVI2019_PLFLNFOB_03951) 91442..92989 - 1548 WP_282563834.1 Type II secretion system protein E VF
LDO76_RS19685 (NVI2019_PLFLNFOB_03952) 92971..94929 - 1959 WP_282563861.1 Secretin PulD VF
LDO76_RS19690 (NVI2019_PLFLNFOB_03953) 94957..95784 - 828 WP_224051078.1 Type II secretion system protein C VF
LDO76_RS19695 (NVI2019_PLFLNFOB_03954) 95902..98559 - 2658 WP_224051079.1 Metalloprotease StcE VF
LDO76_RS19700 99281..100304 - 1024 Protein_78 IS630 family transposase -
LDO76_RS19710 (NVI2019_PLFLNFOB_03956) 102094..102960 + 867 WP_224051081.1 Effector protein YopJ VF
LDO76_RS19715 (NVI2019_PLFLNFOB_03957) 103739..104350 + 612 WP_282563836.1 hypothetical protein VF
LDO76_RS19720 (NVI2019_PLFLNFOB_03958) 104431..109572 + 5142 WP_263422647.1 hypothetical protein VF
LDO76_RS19730 (NVI2019_PLFLNFOB_03962) 111406..112653 + 1248 WP_282563837.1 hypothetical protein VF
LDO76_RS19735 (NVI2019_PLFLNFOB_03963) 112836..114047 - 1212 Protein_84 IS3 family transposase ISAlg Transposase
LDO76_RS19740 (NVI2019_PLFLNFOB_03965) 114071..115297 - 1227 WP_282563838.1 hypothetical protein VF
LDO76_RS19745 116207..117153 + 947 Protein_86 IS3 family transposase -
LDO76_RS19750 117168..117419 + 252 Protein_87 helix-turn-helix domain-containing protein -
LDO76_RS19755 (NVI2019_PLFLNFOB_03966) 117791..118069 - 279 WP_036979198.1 ribbon-helix-helix protein, CopG family -
LDO76_RS19760 (NVI2019_PLFLNFOB_03967) 118021..118707 - 687 WP_282563839.1 AAA family ATPase -
LDO76_RS19765 (NVI2019_PLFLNFOB_03969) 119310..120521 + 1212 Protein_90 IS3 family transposase ISAlg Transposase
LDO76_RS19770 (NVI2019_PLFLNFOB_03970) 120567..120914 + 348 WP_051420173.1 ParB/Srx family N-terminal domain-containing protein -
LDO76_RS21080 120935..121057 + 123 WP_263422648.1 hypothetical protein -
LDO76_RS19775 (NVI2019_PLFLNFOB_03971) 121412..121708 + 297 WP_282563840.1 hypothetical protein -
LDO76_RS19780 (NVI2019_PLFLNFOB_03972) 121651..122184 + 534 WP_282563841.1 type-F conjugative transfer system pilin assembly protein TraF -
LDO76_RS19785 122184..122608 + 425 Protein_95 recombinase family protein -
LDO76_RS19790 (NVI2019_PLFLNFOB_03974) 122780..123031 + 252 WP_036974972.1 type II toxin-antitoxin system Phd/YefM family antitoxin Antitoxin Detail
LDO76_RS19795 (NVI2019_PLFLNFOB_03975) 123021..123302 + 282 WP_036979529.1 type II toxin-antitoxin system RelE/ParE family toxin Toxin Detail
LDO76_RS19800 123531..123833 + 303 Protein_98 recombinase family protein -
LDO76_RS19810 (NVI2019_PLFLNFOB_03977) 124078..124347 + 270 WP_036979554.1 plasmid partitioning/stability family protein -
LDO76_RS19815 (NVI2019_PLFLNFOB_03978) 124542..124820 + 279 WP_230087585.1 S24 family peptidase -
LDO76_RS19820 (NVI2019_PLFLNFOB_03979) 124933..126201 + 1269 WP_036979530.1 translesion error-prone DNA polymerase V subunit UmuC -
LDO76_RS19825 (NVI2019_PLFLNFOB_03980) 126408..126734 + 327 WP_036979532.1 type II toxin-antitoxin system RelE/ParE family toxin -
LDO76_RS19830 (NVI2019_PLFLNFOB_03981) 126721..126993 + 273 WP_036979555.1 helix-turn-helix transcriptional regulator -
LDO76_RS19835 (NVI2019_PLFLNFOB_03982) 127088..127297 + 210 WP_036979533.1 hypothetical protein -
LDO76_RS19840 (NVI2019_PLFLNFOB_03983) 128053..128304 + 252 WP_036979535.1 hypothetical protein -
LDO76_RS19845 (NVI2019_PLFLNFOB_03984) 128346..128708 + 363 WP_282563842.1 hypothetical protein -
LDO76_RS19850 (NVI2019_PLFLNFOB_03985) 128776..129018 + 243 WP_224055086.1 hypothetical protein -
LDO76_RS19855 (NVI2019_PLFLNFOB_03986) 129062..129508 + 447 WP_051459499.1 hypothetical protein -
LDO76_RS19860 (NVI2019_PLFLNFOB_03987) 129539..129871 + 333 WP_051420258.1 N-6 DNA methylase -
LDO76_RS21250 129860..130186 - 327 WP_282563843.1 hypothetical protein -
LDO76_RS19865 (NVI2019_PLFLNFOB_03988) 130240..130515 - 276 WP_036979539.1 type II toxin-antitoxin system RelE/ParE family toxin -
LDO76_RS19870 (NVI2019_PLFLNFOB_03989) 130454..130747 - 294 WP_282563844.1 DUF6290 family protein -
LDO76_RS19875 131311..131735 - 425 Protein_113 transglycosylase SLT domain-containing protein -
LDO76_RS19880 (NVI2019_PLFLNFOB_03991) 132202..132462 + 261 WP_051420257.1 relaxosome protein TraM -
LDO76_RS21085 132475..132633 + 159 WP_282564770.1 hypothetical protein -
LDO76_RS19885 132719..132934 + 216 WP_282563845.1 hypothetical protein -
LDO76_RS19890 (NVI2019_PLFLNFOB_03992) 133814..134005 + 192 WP_036979543.1 TraY domain-containing protein -
LDO76_RS19895 (NVI2019_PLFLNFOB_03993) 134331..134627 + 297 WP_282563846.1 type IV conjugative transfer system pilin TraA -
LDO76_RS19900 (NVI2019_PLFLNFOB_03994) 134649..134954 + 306 WP_036979544.1 type IV conjugative transfer system protein TraL -
LDO76_RS19905 (NVI2019_PLFLNFOB_03995) 134969..135538 + 570 WP_224051089.1 type IV conjugative transfer system protein TraE -
LDO76_RS19910 (NVI2019_PLFLNFOB_03997) 135767..136114 + 348 WP_224051090.1 hypothetical protein -
LDO76_RS21255 136227..136727 + 501 Protein_122 TrbI/VirB10 family protein -
LDO76_RS19925 (NVI2019_PLFLNFOB_04000) 137139..137626 + 488 Protein_123 transcription/translation regulatory transformer protein RfaH -
LDO76_RS19930 (NVI2019_PLFLNFOB_04001) 137740..138081 + 342 WP_224051091.1 TraV family lipoprotein -
LDO76_RS19935 (NVI2019_PLFLNFOB_04002) 138083..140440 + 2358 WP_224051092.1 type IV secretion system protein TraC -
LDO76_RS19940 (NVI2019_PLFLNFOB_04003) 140468..140794 + 327 WP_224051093.1 hypothetical protein -
LDO76_RS19945 (NVI2019_PLFLNFOB_04004) 140770..141195 + 426 WP_071992439.1 type-F conjugative transfer system protein TrbI -
LDO76_RS19950 141206..141847 + 642 Protein_128 type-F conjugative transfer system protein TraW -
LDO76_RS19955 (NVI2019_PLFLNFOB_04007) 141835..142830 + 996 Protein_129 conjugal transfer pilus assembly protein TraU -
LDO76_RS19960 (NVI2019_PLFLNFOB_04009) 142845..143480 + 636 WP_282563847.1 type-F conjugative transfer system pilin assembly protein TrbC -
LDO76_RS19965 (NVI2019_PLFLNFOB_04010) 143462..144289 + 828 WP_051420221.1 hypothetical protein -
LDO76_RS19970 (NVI2019_PLFLNFOB_04011) 144479..145330 + 852 WP_282563862.1 conjugal transfer protein TraN -
LDO76_RS19975 (NVI2019_PLFLNFOB_04012) 145300..145596 + 297 WP_282563840.1 hypothetical protein -
LDO76_RS19980 (NVI2019_PLFLNFOB_04013) 145539..146072 + 534 WP_282563841.1 type-F conjugative transfer system pilin assembly protein TraF -
LDO76_RS19985 146104..146385 + 282 WP_036978103.1 hypothetical protein -
LDO76_RS19995 (NVI2019_PLFLNFOB_04015) 146913..147191 + 279 WP_036978105.1 type II toxin-antitoxin system RelE/ParE family toxin Toxin Detail
LDO76_RS20000 (NVI2019_PLFLNFOB_04016) 147191..147505 + 315 WP_036978107.1 HigA family addiction module antitoxin Antitoxin Detail
LDO76_RS20010 (NVI2019_PLFLNFOB_04019) 148587..149695 + 1109 Protein_138 conjugal transfer protein TraH -
LDO76_RS20020 151108..152249 - 1142 Protein_139 IS256 family transposase -
LDO76_RS20030 (NVI2019_PLFLNFOB_04024) 152919..153482 - 564 WP_224051097.1 hypothetical protein -
LDO76_RS20035 (NVI2019_PLFLNFOB_04025) 153492..154688 - 1197 WP_224051098.1 hypothetical protein -
LDO76_RS20040 (NVI2019_PLFLNFOB_04026) 154706..157357 - 2652 WP_224051099.1 Outer membrane usher protein FimD VF
LDO76_RS20045 (NVI2019_PLFLNFOB_04027) 157314..158042 - 729 WP_224051100.1 molecular chaperone -
LDO76_RS20050 (NVI2019_PLFLNFOB_04028) 158058..158729 - 672 WP_224051101.1 Chaperone protein FimC VF
LDO76_RS20055 (NVI2019_PLFLNFOB_04029) 158803..159342 - 540 WP_224051102.1 fimbrial protein -
LDO76_RS20060 (NVI2019_PLFLNFOB_04031) 159896..160243 + 348 WP_282563848.1 hypothetical protein -
LDO76_RS20070 (NVI2019_PLFLNFOB_04033) 160475..160996 + 522 WP_282563849.1 Fic family protein -
LDO76_RS20075 161045..162186 - 1142 Protein_148 IS256 family transposase -
LDO76_RS19295 (NVI2019_PLFLNFOB_04036) 162564..171362 - 8799 WP_282564771.1 hypothetical protein VF

Similar MGE(s)


Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.

Detail Organism MGE type Related TA Genome accession Coordinates Mash
distance