MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 168972 bp
Accession: NZ_OU659119 Location: 1..168972 Organism: Providencia alcalifaciens strain 2019-01-3283-1-1 isolate 2019-01-3283-1-1 Replicon: plasmid 2
Accession: NZ_OU659119 Location: 1..168972 Organism: Providencia alcalifaciens strain 2019-01-3283-1-1 isolate 2019-01-3283-1-1 Replicon: plasmid 2
Gene structure
The 5 kb flanking regions of this MGE are displayed.
Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
---|---|---|---|---|---|---|
LDO75_RS18455 (NVI2019_PEGOAJLN_03711) | 342..8915 | - | 8574 | WP_224063837.1 | TcdA/TcdB catalytic glycosyltransferase domain-containing protein | - |
LDO75_RS18460 (NVI2019_PEGOAJLN_03712) | 9694..10560 | - | 867 | WP_224051081.1 | Effector protein YopJ | VF |
LDO75_RS18470 | 12350..13373 | + | 1024 | Protein_2 | IS630 family transposase | - |
LDO75_RS18475 (NVI2019_PEGOAJLN_03714) | 14095..16752 | + | 2658 | WP_224051079.1 | Metalloprotease StcE | VF |
LDO75_RS18480 (NVI2019_PEGOAJLN_03715) | 16870..17697 | + | 828 | WP_224051078.1 | Type II secretion system protein C | VF |
LDO75_RS18485 (NVI2019_PEGOAJLN_03716) | 17725..19683 | + | 1959 | WP_282563861.1 | Secretin PulD | VF |
LDO75_RS18490 (NVI2019_PEGOAJLN_03717) | 19665..21212 | + | 1548 | WP_282563834.1 | Type II secretion system protein E | VF |
LDO75_RS18495 (NVI2019_PEGOAJLN_03718) | 21172..22392 | + | 1221 | Protein_7 | Type II secretion system protein F | VF |
LDO75_RS18500 (NVI2019_PEGOAJLN_03719) | 22420..22929 | + | 510 | WP_282564490.1 | Type II secretion system protein G | VF |
LDO75_RS18505 (NVI2019_PEGOAJLN_03720) | 22884..23438 | + | 555 | WP_282563833.1 | Putative type II secretion system protein H | VF |
LDO75_RS18510 (NVI2019_PEGOAJLN_03721) | 23390..23767 | + | 378 | WP_282563832.1 | Type II secretion system protein I | VF |
LDO75_RS18515 (NVI2019_PEGOAJLN_03722) | 23752..24345 | + | 594 | WP_224051071.1 | Type II secretion system protein J | VF |
LDO75_RS18520 (NVI2019_PEGOAJLN_03723) | 24345..25424 | + | 1080 | WP_282563831.1 | Putative type II secretion system protein K | VF |
LDO75_RS18525 (NVI2019_PEGOAJLN_03724) | 25358..26476 | + | 1119 | WP_282564480.1 | Type II secretion system protein L | VF |
LDO75_RS18530 (NVI2019_PEGOAJLN_03725) | 26469..26981 | + | 513 | WP_224051125.1 | Type II secretion system protein M | VF |
LDO75_RS18535 (NVI2019_PEGOAJLN_03726) | 27091..27894 | + | 804 | WP_282563859.1 | Type 4 prepilin-like proteins leader peptide-processing enzyme | VF |
LDO75_RS18540 (NVI2019_PEGOAJLN_03727) | 27942..28331 | + | 390 | WP_224051123.1 | type II secretion system pilot lipoprotein GspS | - |
LDO75_RS18545 (NVI2019_PEGOAJLN_03728) | 28996..30684 | - | 1689 | WP_224051122.1 | Secreted effector protein SptP | VF |
LDO75_RS18550 (NVI2019_PEGOAJLN_03729) | 30714..31085 | - | 372 | WP_224051121.1 | Chaperone protein sicP | VF |
LDO75_RS18555 (NVI2019_PEGOAJLN_03730) | 31453..32664 | - | 1212 | Protein_19 | IS3 family transposase ISAlg | Transposase |
LDO75_RS18560 (NVI2019_PEGOAJLN_03732) | 32688..33785 | - | 1098 | WP_282564481.1 | hypothetical protein | VF |
LDO75_RS18565 | 34824..35770 | + | 947 | Protein_21 | IS3 family transposase | - |
LDO75_RS18570 | 35785..36036 | + | 252 | Protein_22 | helix-turn-helix domain-containing protein | - |
LDO75_RS18575 (NVI2019_PEGOAJLN_03733) | 36254..36532 | - | 279 | WP_036979198.1 | ribbon-helix-helix protein, CopG family | - |
LDO75_RS18580 (NVI2019_PEGOAJLN_03734) | 36484..37170 | - | 687 | WP_282563839.1 | AAA family ATPase | - |
LDO75_RS18585 (NVI2019_PEGOAJLN_03736) | 37853..39064 | + | 1212 | Protein_25 | IS3 family transposase ISAlg | Transposase |
LDO75_RS18590 (NVI2019_PEGOAJLN_03737) | 39110..39457 | + | 348 | WP_051420173.1 | ParB/Srx family N-terminal domain-containing protein | - |
LDO75_RS19245 | 39478..39600 | + | 123 | WP_263422648.1 | hypothetical protein | - |
LDO75_RS18595 (NVI2019_PEGOAJLN_03738) | 39955..40251 | + | 297 | WP_282564482.1 | hypothetical protein | - |
LDO75_RS18600 (NVI2019_PEGOAJLN_03739) | 40194..40727 | + | 534 | WP_282563841.1 | type-F conjugative transfer system pilin assembly protein TraF | - |
LDO75_RS18605 | 40727..41151 | + | 425 | Protein_30 | recombinase family protein | - |
LDO75_RS18610 (NVI2019_PEGOAJLN_03741) | 41323..41574 | + | 252 | WP_036974972.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
LDO75_RS18615 (NVI2019_PEGOAJLN_03742) | 41564..41845 | + | 282 | WP_036979529.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
LDO75_RS18620 | 42074..42376 | + | 303 | Protein_33 | recombinase family protein | - |
LDO75_RS18630 (NVI2019_PEGOAJLN_03744) | 42621..42890 | + | 270 | WP_036979554.1 | plasmid partitioning/stability family protein | - |
LDO75_RS18635 (NVI2019_PEGOAJLN_03745) | 43085..43363 | + | 279 | WP_230087585.1 | S24 family peptidase | - |
LDO75_RS18640 (NVI2019_PEGOAJLN_03746) | 43476..44744 | + | 1269 | WP_224063847.1 | translesion error-prone DNA polymerase V subunit UmuC | - |
LDO75_RS18645 (NVI2019_PEGOAJLN_03747) | 44951..45277 | + | 327 | WP_036979532.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
LDO75_RS18650 (NVI2019_PEGOAJLN_03748) | 45264..45536 | + | 273 | WP_036979555.1 | helix-turn-helix transcriptional regulator | - |
LDO75_RS18655 (NVI2019_PEGOAJLN_03749) | 45631..45840 | + | 210 | WP_036979533.1 | hypothetical protein | - |
LDO75_RS18660 (NVI2019_PEGOAJLN_03750) | 46596..46847 | + | 252 | WP_036979535.1 | hypothetical protein | - |
LDO75_RS18665 (NVI2019_PEGOAJLN_03751) | 46889..47251 | + | 363 | WP_282563842.1 | hypothetical protein | - |
LDO75_RS18670 (NVI2019_PEGOAJLN_03752) | 47319..47561 | + | 243 | WP_282564483.1 | hypothetical protein | - |
LDO75_RS18675 (NVI2019_PEGOAJLN_03753) | 47605..48051 | + | 447 | WP_051459499.1 | hypothetical protein | - |
LDO75_RS18680 (NVI2019_PEGOAJLN_03754) | 48067..48414 | + | 348 | Protein_44 | N-6 DNA methylase | - |
LDO75_RS18685 (NVI2019_PEGOAJLN_03755) | 48784..49059 | - | 276 | WP_036979539.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
LDO75_RS18690 (NVI2019_PEGOAJLN_03756) | 48998..49291 | - | 294 | WP_282563844.1 | DUF6290 family protein | - |
LDO75_RS18695 | 49855..50279 | - | 425 | Protein_47 | transglycosylase SLT domain-containing protein | - |
LDO75_RS18700 (NVI2019_PEGOAJLN_03757) | 50746..51006 | + | 261 | WP_051420257.1 | relaxosome protein TraM | - |
LDO75_RS18705 | 51263..51478 | + | 216 | WP_282564484.1 | hypothetical protein | - |
LDO75_RS18710 (NVI2019_PEGOAJLN_03758) | 52357..52548 | + | 192 | WP_036979543.1 | TraY domain-containing protein | - |
LDO75_RS18715 (NVI2019_PEGOAJLN_03759) | 52937..53170 | + | 234 | WP_051420256.1 | type IV conjugative transfer system pilin TraA | - |
LDO75_RS18720 (NVI2019_PEGOAJLN_03760) | 53192..53497 | + | 306 | WP_036979544.1 | type IV conjugative transfer system protein TraL | - |
LDO75_RS18725 (NVI2019_PEGOAJLN_03761) | 53512..54081 | + | 570 | WP_224063851.1 | type IV conjugative transfer system protein TraE | - |
LDO75_RS19365 | 54770..55270 | + | 501 | Protein_54 | TrbI/VirB10 family protein | - |
LDO75_RS18745 (NVI2019_PEGOAJLN_03766) | 55682..56169 | + | 488 | Protein_55 | transcription/translation regulatory transformer protein RfaH | - |
LDO75_RS18750 (NVI2019_PEGOAJLN_03767) | 56283..56624 | + | 342 | WP_036979549.1 | TraV family lipoprotein | - |
LDO75_RS18755 (NVI2019_PEGOAJLN_03768) | 56806..57390 | + | 585 | Protein_57 | TraC family protein | - |
LDO75_RS18760 (NVI2019_PEGOAJLN_03769) | 57612..58982 | + | 1371 | WP_282564485.1 | DUF5934 domain-containing protein | - |
LDO75_RS18765 (NVI2019_PEGOAJLN_03770) | 59010..59336 | + | 327 | WP_224063859.1 | hypothetical protein | - |
LDO75_RS18770 (NVI2019_PEGOAJLN_03771) | 59312..59737 | + | 426 | WP_224063861.1 | type-F conjugative transfer system protein TrbI | - |
LDO75_RS18775 | 59748..60389 | + | 642 | Protein_61 | type-F conjugative transfer system protein TraW | - |
LDO75_RS18780 (NVI2019_PEGOAJLN_03774) | 60377..61372 | + | 996 | Protein_62 | conjugal transfer pilus assembly protein TraU | - |
LDO75_RS18785 (NVI2019_PEGOAJLN_03776) | 61387..62022 | + | 636 | WP_282563847.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
LDO75_RS18790 (NVI2019_PEGOAJLN_03777) | 62004..62831 | + | 828 | WP_224063863.1 | hypothetical protein | - |
LDO75_RS18795 (NVI2019_PEGOAJLN_03778) | 63021..63872 | + | 852 | WP_282564491.1 | conjugal transfer protein TraN | - |
LDO75_RS18800 (NVI2019_PEGOAJLN_03779) | 63842..64615 | + | 774 | WP_224063865.1 | type-F conjugative transfer system pilin assembly protein TraF | - |
LDO75_RS18805 (NVI2019_PEGOAJLN_03780) | 64647..64928 | + | 282 | WP_224063867.1 | hypothetical protein | - |
LDO75_RS18815 (NVI2019_PEGOAJLN_03782) | 65538..65816 | + | 279 | WP_036978105.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
LDO75_RS18820 (NVI2019_PEGOAJLN_03783) | 65816..66130 | + | 315 | WP_036978107.1 | HigA family addiction module antitoxin | Antitoxin Detail |
LDO75_RS18825 (NVI2019_PEGOAJLN_03785) | 67055..68431 | + | 1377 | Protein_70 | conjugal transfer pilus assembly protein TraH | - |
LDO75_RS18830 (NVI2019_PEGOAJLN_03786) | 68454..68675 | + | 222 | WP_282564486.1 | hypothetical protein | - |
LDO75_RS18835 (NVI2019_PEGOAJLN_03787) | 68696..69010 | + | 315 | WP_224063869.1 | hypothetical protein | - |
LDO75_RS18840 (NVI2019_PEGOAJLN_03788) | 69969..70454 | + | 486 | WP_282564487.1 | ProQ/FINO family protein | - |
LDO75_RS18845 (NVI2019_PEGOAJLN_03789) | 70745..79864 | - | 9120 | WP_282564488.1 | hypothetical protein | VF |
LDO75_RS18850 | 80106..80246 | - | 141 | WP_196231754.1 | helix-turn-helix domain-containing protein | - |
LDO75_RS18855 | 80211..80369 | + | 159 | Protein_76 | zinc ribbon domain-containing protein | - |
LDO75_RS18860 | 80356..80589 | + | 234 | Protein_77 | cytolethal distending toxin type II subunit CdtA | - |
LDO75_RS18865 | 80610..81419 | + | 810 | WP_282564489.1 | Cytolethal distending toxin subunit B | VF |
LDO75_RS18870 (NVI2019_PEGOAJLN_03792) | 81433..81981 | + | 549 | WP_036978116.1 | hypothetical protein | VF |
LDO75_RS18875 (NVI2019_PEGOAJLN_03793) | 83503..85149 | - | 1647 | WP_224063872.1 | lipid IV(A) 4-amino-4-deoxy-L-arabinosyltransferase | - |
LDO75_RS18880 (NVI2019_PEGOAJLN_03794) | 86111..87058 | + | 948 | WP_224063815.1 | ISNCY family transposase ISRor2 | VF |
LDO75_RS18885 | 88142..88342 | + | 201 | WP_263428773.1 | transposase | - |
LDO75_RS18890 (NVI2019_PEGOAJLN_03795) | 88919..89644 | + | 726 | WP_224063817.1 | tyrosine-type recombinase/integrase | - |
LDO75_RS18895 (NVI2019_PEGOAJLN_03796) | 90438..91652 | + | 1215 | WP_224063875.1 | AAA family ATPase | - |
LDO75_RS18900 (NVI2019_PEGOAJLN_03797) | 91642..92628 | + | 987 | WP_282564473.1 | ParB family protein | - |
LDO75_RS18905 (NVI2019_PEGOAJLN_03798) | 92827..93765 | + | 939 | WP_224063819.1 | RepA family replication protein | - |
LDO75_RS18915 (NVI2019_PEGOAJLN_03802) | 96115..96315 | - | 201 | Protein_88 | IS1 family transposase ISYps7 | Transposase |
LDO75_RS18920 (NVI2019_PEGOAJLN_03803) | 96632..97858 | + | 1227 | WP_282564474.1 | hypothetical protein | VF |
LDO75_RS18925 (NVI2019_PEGOAJLN_03804) | 98041..99252 | - | 1212 | Protein_90 | IS3 family transposase ISAlg | Transposase |
LDO75_RS18940 (NVI2019_PEGOAJLN_03806) | 100729..101376 | + | 648 | WP_282564475.1 | hypothetical protein | - |
LDO75_RS18945 | 102078..102335 | - | 258 | Protein_92 | IS3 family transposase | - |
LDO75_RS18950 (NVI2019_PEGOAJLN_03807) | 102966..103727 | + | 762 | WP_224063823.1 | Invasion protein InvF | VF |
LDO75_RS18955 (NVI2019_PEGOAJLN_03808) | 103717..105444 | + | 1728 | WP_282564476.1 | Type 3 secretion system secretin | VF |
LDO75_RS18960 (NVI2019_PEGOAJLN_03809) | 105434..106543 | + | 1110 | WP_036961031.1 | Protein MxiC | VF |
LDO75_RS18965 (NVI2019_PEGOAJLN_03810) | 106581..108671 | + | 2091 | WP_036979247.1 | Invasion protein InvA | VF |
LDO75_RS18970 (NVI2019_PEGOAJLN_03811) | 108689..109156 | + | 468 | WP_282564477.1 | Surface presentation of antigens protein SpaK | VF |
LDO75_RS18975 (NVI2019_PEGOAJLN_03812) | 109093..110379 | + | 1287 | WP_036979250.1 | putative ATP synthase SpaL | VF |
LDO75_RS18980 (NVI2019_PEGOAJLN_03813) | 110366..110821 | + | 456 | WP_036961022.1 | hypothetical protein | VF |
LDO75_RS18985 (NVI2019_PEGOAJLN_03814) | 110809..111696 | + | 888 | WP_036979252.1 | hypothetical protein | VF |
LDO75_RS18990 (NVI2019_PEGOAJLN_03815) | 111696..112601 | + | 906 | WP_036979254.1 | Surface presentation of antigens protein SpaO | VF |
LDO75_RS18995 (NVI2019_PEGOAJLN_03816) | 112604..113266 | + | 663 | Protein_102 | Surface presentation of antigens protein SpaP | VF |
LDO75_RS19005 (NVI2019_PEGOAJLN_03818) | 113305..114423 | + | 1119 | WP_282563853.1 | Surface presentation of antigens protein SpaR | VF |
LDO75_RS19010 (NVI2019_PEGOAJLN_03819) | 114350..115411 | + | 1062 | WP_282490723.1 | Surface presentation of antigens protein SpaS | VF |
LDO75_RS19015 (NVI2019_PEGOAJLN_03820) | 115551..116051 | + | 501 | WP_036979256.1 | Chaperone protein SicA | VF |
LDO75_RS19020 (NVI2019_PEGOAJLN_03821) | 116054..117832 | + | 1779 | WP_224063824.1 | Cell invasion protein SipB | VF |
LDO75_RS19025 (NVI2019_PEGOAJLN_03822) | 117857..119083 | + | 1227 | WP_224063825.1 | Cell invasion protein SipC | VF |
LDO75_RS19030 (NVI2019_PEGOAJLN_03823) | 119178..120242 | + | 1065 | WP_224063826.1 | Cell invasion protein SipD | VF |
LDO75_RS19035 (NVI2019_PEGOAJLN_03824) | 120263..127486 | + | 7224 | WP_224063827.1 | hypothetical protein | VF |
LDO75_RS19040 (NVI2019_PEGOAJLN_03825) | 127586..127828 | + | 243 | WP_036978984.1 | hypothetical protein | - |
LDO75_RS19045 (NVI2019_PEGOAJLN_03826) | 127879..128388 | - | 510 | WP_051420270.1 | hypothetical protein | VF |
LDO75_RS19050 (NVI2019_PEGOAJLN_03827) | 128808..130487 | + | 1680 | WP_051420271.1 | Transcriptional regulator HilA | VF |
LDO75_RS19055 (NVI2019_PEGOAJLN_03828) | 130498..131022 | + | 525 | WP_282563854.1 | hypothetical protein | VF |
LDO75_RS19060 (NVI2019_PEGOAJLN_03829) | 131034..131678 | + | 645 | WP_224063828.1 | hypothetical protein | - |
LDO75_RS19065 (NVI2019_PEGOAJLN_03830) | 132015..133256 | + | 1242 | WP_282563855.1 | Protein PrgH | VF |
LDO75_RS19070 (NVI2019_PEGOAJLN_03831) | 133277..133525 | + | 249 | WP_036978978.1 | Protein PrgI | VF |
LDO75_RS19075 (NVI2019_PEGOAJLN_03832) | 133552..133890 | + | 339 | WP_282563856.1 | hypothetical protein | VF |
LDO75_RS19080 (NVI2019_PEGOAJLN_03833) | 133860..134609 | + | 750 | WP_036978976.1 | Lipoprotein PrgK | VF |
LDO75_RS19085 (NVI2019_PEGOAJLN_03834) | 134602..135204 | + | 603 | WP_224051119.1 | Oxygen-regulated invasion protein OrgA | VF |
LDO75_RS19090 (NVI2019_PEGOAJLN_03835) | 135161..135922 | + | 762 | WP_282564478.1 | Oxygen-regulated invasion protein OrgB | VF |
LDO75_RS19095 (NVI2019_PEGOAJLN_03836) | 135847..136284 | + | 438 | WP_051420274.1 | hypothetical protein | VF |
LDO75_RS19100 (NVI2019_PEGOAJLN_03837) | 136629..137036 | + | 408 | WP_282563858.1 | hypothetical protein | - |
LDO75_RS19105 (NVI2019_PEGOAJLN_03838) | 137195..138037 | - | 843 | WP_036983325.1 | hypothetical protein | VF |
LDO75_RS19110 (NVI2019_PEGOAJLN_03839) | 138255..138554 | - | 300 | WP_036978971.1 | hypothetical protein | - |
LDO75_RS19115 (NVI2019_PEGOAJLN_03840) | 138633..138944 | - | 312 | WP_036978970.1 | hypothetical protein | - |
LDO75_RS19120 (NVI2019_PEGOAJLN_03842) | 139823..140848 | - | 1026 | Protein_126 | cytochrome c peroxidase | - |
LDO75_RS19125 (NVI2019_PEGOAJLN_03843) | 141553..142023 | - | 471 | Protein_127 | IS3 family transposase ISYal1 | Transposase |
LDO75_RS19130 (NVI2019_PEGOAJLN_03844) | 142039..143250 | - | 1212 | Protein_128 | IS3 family transposase ISAlg | Transposase |
LDO75_RS19135 | 143286..143926 | - | 641 | Protein_129 | IS3 family transposase ISYal1 | Transposase |
LDO75_RS19140 (NVI2019_PEGOAJLN_03848) | 144216..145115 | - | 900 | WP_224063830.1 | hypothetical protein | VF |
LDO75_RS19145 (NVI2019_PEGOAJLN_03849) | 145376..145960 | - | 585 | WP_036978086.1 | 2OG-Fe(II) oxygenase | - |
LDO75_RS19150 | 147125..148148 | + | 1024 | Protein_132 | IS3 family transposase | - |
LDO75_RS19155 | 148376..148653 | - | 278 | Protein_133 | type II toxin-antitoxin system RelE/ParE family toxin | - |
LDO75_RS19160 (NVI2019_PEGOAJLN_03850) | 148650..148900 | - | 251 | Protein_134 | antitoxin | - |
LDO75_RS19370 | 149579..149758 | - | 180 | WP_282564479.1 | hypothetical protein | - |
LDO75_RS19170 (NVI2019_PEGOAJLN_03853) | 151466..153157 | + | 1692 | WP_224051120.1 | putative E3 ubiquitin-protein ligase ipaH7.8 | VF |
LDO75_RS19175 (NVI2019_PEGOAJLN_03855) | 153449..154557 | + | 1109 | WP_224063877.1 | IS3 family transposase ISYal1 | Transposase |
LDO75_RS19180 | 154571..155187 | - | 617 | Protein_138 | IS3 family transposase ISYal1 | Transposase |
LDO75_RS19185 | 155239..155331 | - | 93 | WP_224063831.1 | helix-turn-helix domain-containing protein | - |
LDO75_RS19190 (NVI2019_PEGOAJLN_03858) | 155354..155770 | + | 417 | WP_036974619.1 | IS200-IS605 family transposase IS609 | Transposase |
LDO75_RS19195 (NVI2019_PEGOAJLN_03859) | 155924..164860 | - | 8937 | WP_224063833.1 | TcdA/TcdB catalytic glycosyltransferase domain-containing protein | - |
LDO75_RS19200 (NVI2019_PEGOAJLN_03860) | 165452..165826 | - | 375 | WP_224063835.1 | ISNCY family transposase ISPlu15 | Transposase |
LDO75_RS19205 (NVI2019_PEGOAJLN_03861) | 166036..166599 | + | 564 | Protein_143 | Tn3 family transposase TnpR_ISSba14 | Transposase |
LDO75_RS19210 (NVI2019_PEGOAJLN_03862) | 166638..167780 | - | 1143 | Protein_144 | IS200-IS605 family transposase IS609 | Transposase |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
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