NZ_OU6591141..170656

MGE detailed information

MGE type: Non-Mobilizable plasmid        MGE length: 170656 bp
Accession: NZ_OU659114        Location: 1..170656         Organism: Providencia alcalifaciens strain 2019-04-27799-1-2 isolate 2019-04-27799-1-2       Replicon: plasmid 2


Gene structure


The 5 kb flanking regions of this MGE are displayed.

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
LDO34_RS19285 529..657 - 129 WP_224051107.1 helix-turn-helix domain-containing protein -
LDO34_RS19290 634..858 + 225 Protein_2 zinc ribbon domain-containing protein -
LDO34_RS19295 (NVI2019_KOLGMIGM_03877) 1875..2624 + 750 WP_224051108.1 hypothetical protein VF
LDO34_RS19300 2645..3456 + 812 Protein_4 Cytolethal distending toxin subunit B VF
LDO34_RS19305 (NVI2019_KOLGMIGM_03880) 3471..4019 + 549 WP_224051109.1 hypothetical protein VF
LDO34_RS19310 5360..6308 + 949 Protein_6 Rpn family recombination-promoting nuclease/putative transposase -
LDO34_RS19315 (NVI2019_KOLGMIGM_03884) 6552..8198 - 1647 WP_224051110.1 lipid IV(A) 4-amino-4-deoxy-L-arabinosyltransferase -
LDO34_RS19320 (NVI2019_KOLGMIGM_03885) 9154..10101 + 948 WP_224051111.1 ISNCY family transposase ISPlu15 VF
LDO34_RS19325 11186..11386 + 201 WP_154635416.1 zinc ribbon domain-containing protein -
LDO34_RS19330 (NVI2019_KOLGMIGM_03886) 11951..12676 + 726 WP_051420265.1 tyrosine-type recombinase/integrase -
LDO34_RS19335 (NVI2019_KOLGMIGM_03887) 13512..14726 + 1215 WP_224051126.1 AAA family ATPase -
LDO34_RS19340 (NVI2019_KOLGMIGM_03888) 14716..15714 + 999 WP_282563851.1 ParB family protein -
LDO34_RS19345 (NVI2019_KOLGMIGM_03889) 15901..16839 + 939 WP_051420266.1 RepA family replication protein -
LDO34_RS19350 17662..18556 - 895 Protein_14 DDE-type integrase/transposase/recombinase -
LDO34_RS19355 18610..18833 - 224 Protein_15 transposase -
LDO34_RS19360 (NVI2019_KOLGMIGM_03892) 19453..28431 + 8979 WP_224051112.1 TcdA/TcdB catalytic glycosyltransferase domain-containing protein -
LDO34_RS19365 28521..28808 - 288 Protein_17 IS3 family transposase ISBrsa1 Transposase
LDO34_RS19370 (NVI2019_KOLGMIGM_03894) 28875..29983 + 1109 WP_224051127.1 IS3 family transposase ISYal1 Transposase
LDO34_RS19375 (NVI2019_KOLGMIGM_03895) 30083..31237 - 1155 WP_155250252.1 hypothetical protein VF
LDO34_RS19380 (NVI2019_KOLGMIGM_03896) 31321..33012 - 1692 WP_224051113.1 Secreted effector protein SptP VF
LDO34_RS19385 (NVI2019_KOLGMIGM_03897) 33042..33413 - 372 WP_036979473.1 Chaperone protein sicP VF
LDO34_RS19390 34025..34150 - 126 Protein_22 IS200/IS605 family transposase -
LDO34_RS19395 34144..34725 - 582 Protein_23 transposase -
LDO34_RS19405 (NVI2019_KOLGMIGM_03900) 35966..36911 - 946 Protein_25 IS3 family transposase IS911 Transposase
LDO34_RS19410 (NVI2019_KOLGMIGM_03901) 37079..37936 + 858 WP_224051114.1 hypothetical protein -
LDO34_RS19415 38666..38877 - 212 Protein_27 IS3 family transposase -
LDO34_RS19420 (NVI2019_KOLGMIGM_03902) 39472..40233 + 762 WP_036979246.1 Invasion protein InvF VF
LDO34_RS19425 (NVI2019_KOLGMIGM_03903) 40223..41950 + 1728 WP_036979259.1 Type 3 secretion system secretin VF
LDO34_RS19430 (NVI2019_KOLGMIGM_03904) 41940..43049 + 1110 WP_036961031.1 Protein MxiC VF
LDO34_RS19435 (NVI2019_KOLGMIGM_03905) 43087..45177 + 2091 WP_036979247.1 Invasion protein InvA VF
LDO34_RS19440 (NVI2019_KOLGMIGM_03906) 45195..45662 + 468 WP_282563852.1 Surface presentation of antigens protein SpaK VF
LDO34_RS19445 (NVI2019_KOLGMIGM_03907) 45599..46885 + 1287 WP_036979250.1 putative ATP synthase SpaL VF
LDO34_RS19450 (NVI2019_KOLGMIGM_03908) 46872..47327 + 456 WP_036961022.1 hypothetical protein VF
LDO34_RS19455 (NVI2019_KOLGMIGM_03909) 47315..48211 + 897 WP_224051116.1 hypothetical protein VF
LDO34_RS19460 (NVI2019_KOLGMIGM_03910) 48211..49116 + 906 WP_036979254.1 Surface presentation of antigens protein SpaO VF
LDO34_RS19465 (NVI2019_KOLGMIGM_03911) 49119..49781 + 663 Protein_37 Surface presentation of antigens protein SpaP VF
LDO34_RS19475 (NVI2019_KOLGMIGM_03913) 49820..50938 + 1119 WP_282563853.1 Surface presentation of antigens protein SpaR VF
LDO34_RS19480 (NVI2019_KOLGMIGM_03914) 50865..51926 + 1062 WP_282490723.1 Surface presentation of antigens protein SpaS VF
LDO34_RS19485 (NVI2019_KOLGMIGM_03915) 52066..52566 + 501 WP_036979256.1 Chaperone protein SicA VF
LDO34_RS19490 (NVI2019_KOLGMIGM_03916) 52569..54347 + 1779 WP_051420268.1 Cell invasion protein SipB VF
LDO34_RS19495 (NVI2019_KOLGMIGM_03917) 54372..55598 + 1227 WP_036979257.1 Cell invasion protein SipC VF
LDO34_RS19500 (NVI2019_KOLGMIGM_03918) 55693..56760 + 1068 WP_051420269.1 Cell invasion protein SipD VF
LDO34_RS19505 (NVI2019_KOLGMIGM_03919) 56781..63215 + 6435 WP_224055088.1 hypothetical protein VF
LDO34_RS19510 (NVI2019_KOLGMIGM_03920) 63315..63557 + 243 WP_036978984.1 hypothetical protein -
LDO34_RS19515 (NVI2019_KOLGMIGM_03921) 63608..64117 - 510 WP_051420270.1 hypothetical protein VF
LDO34_RS19520 (NVI2019_KOLGMIGM_03922) 64537..66216 + 1680 WP_051420271.1 Transcriptional regulator HilA VF
LDO34_RS19525 (NVI2019_KOLGMIGM_03923) 66227..66751 + 525 WP_282563854.1 hypothetical protein VF
LDO34_RS19530 (NVI2019_KOLGMIGM_03924) 66763..67407 + 645 WP_224051118.1 hypothetical protein -
LDO34_RS19535 (NVI2019_KOLGMIGM_03925) 67744..68985 + 1242 WP_282563855.1 Protein PrgH VF
LDO34_RS19540 (NVI2019_KOLGMIGM_03926) 69006..69254 + 249 WP_036978978.1 Protein PrgI VF
LDO34_RS19545 (NVI2019_KOLGMIGM_03927) 69281..69619 + 339 WP_282563856.1 hypothetical protein VF
LDO34_RS19550 (NVI2019_KOLGMIGM_03928) 69589..70338 + 750 WP_036978976.1 Lipoprotein PrgK VF
LDO34_RS19555 (NVI2019_KOLGMIGM_03929) 70331..70933 + 603 WP_224051119.1 Oxygen-regulated invasion protein OrgA VF
LDO34_RS19560 (NVI2019_KOLGMIGM_03930) 70890..71651 + 762 WP_282563857.1 Oxygen-regulated invasion protein OrgB VF
LDO34_RS19565 (NVI2019_KOLGMIGM_03931) 71576..72013 + 438 WP_051420274.1 hypothetical protein VF
LDO34_RS19570 (NVI2019_KOLGMIGM_03932) 72358..72765 + 408 WP_282563858.1 hypothetical protein -
LDO34_RS19575 (NVI2019_KOLGMIGM_03933) 72924..73766 - 843 WP_036983325.1 hypothetical protein VF
LDO34_RS19580 (NVI2019_KOLGMIGM_03934) 73984..74283 - 300 WP_036978971.1 hypothetical protein -
LDO34_RS19585 (NVI2019_KOLGMIGM_03935) 74362..74673 - 312 WP_036978970.1 hypothetical protein -
LDO34_RS19595 (NVI2019_KOLGMIGM_03938) 77126..78817 + 1692 WP_224051120.1 putative E3 ubiquitin-protein ligase ipaH7.8 VF
LDO34_RS19600 (NVI2019_KOLGMIGM_03940) 79185..80396 + 1212 Protein_62 IS3 family transposase ISAlg Transposase
LDO34_RS19605 (NVI2019_KOLGMIGM_03941) 80764..81135 + 372 WP_224051121.1 Chaperone protein sicP VF
LDO34_RS19610 (NVI2019_KOLGMIGM_03942) 81165..82853 + 1689 WP_224051122.1 Secreted effector protein SptP VF
LDO34_RS19615 (NVI2019_KOLGMIGM_03943) 83518..83907 - 390 WP_224051123.1 type II secretion system pilot lipoprotein GspS -
LDO34_RS19620 (NVI2019_KOLGMIGM_03944) 83955..84758 - 804 WP_282563859.1 Type 4 prepilin-like proteins leader peptide-processing enzyme VF
LDO34_RS19625 (NVI2019_KOLGMIGM_03945) 84868..85380 - 513 WP_224051125.1 Type II secretion system protein M VF
LDO34_RS19630 (NVI2019_KOLGMIGM_03946) 85373..86491 - 1119 WP_282563830.1 Type II secretion system protein L VF
LDO34_RS19635 (NVI2019_KOLGMIGM_03947) 86425..87504 - 1080 WP_282563831.1 Putative type II secretion system protein K VF
LDO34_RS19640 (NVI2019_KOLGMIGM_03948) 87504..88097 - 594 WP_224051071.1 Type II secretion system protein J VF
LDO34_RS19645 (NVI2019_KOLGMIGM_03949) 88082..88459 - 378 WP_282563832.1 Type II secretion system protein I VF
LDO34_RS19650 (NVI2019_KOLGMIGM_03950) 88411..88965 - 555 WP_282563833.1 Putative type II secretion system protein H VF
LDO34_RS19655 (NVI2019_KOLGMIGM_03951) 88920..89387 - 468 WP_282563860.1 Type II secretion system protein G VF
LDO34_RS19660 (NVI2019_KOLGMIGM_03952) 89457..90677 - 1221 Protein_74 Type II secretion system protein F VF
LDO34_RS19665 (NVI2019_KOLGMIGM_03953) 90637..92184 - 1548 WP_282563834.1 Type II secretion system protein E VF
LDO34_RS19670 (NVI2019_KOLGMIGM_03954) 92166..94124 - 1959 WP_282563861.1 Secretin PulD VF
LDO34_RS19675 (NVI2019_KOLGMIGM_03955) 94152..94979 - 828 WP_224051078.1 Type II secretion system protein C VF
LDO34_RS19680 (NVI2019_KOLGMIGM_03956) 95097..97754 - 2658 WP_224051079.1 Metalloprotease StcE VF
LDO34_RS19685 98476..99499 - 1024 Protein_79 IS630 family transposase -
LDO34_RS21230 100090..100212 - 123 WP_282563835.1 hypothetical protein -
LDO34_RS19695 (NVI2019_KOLGMIGM_03958) 101289..102155 + 867 WP_224051081.1 Effector protein YopJ VF
LDO34_RS19700 (NVI2019_KOLGMIGM_03959) 102934..103545 + 612 WP_282563836.1 hypothetical protein VF
LDO34_RS19705 (NVI2019_KOLGMIGM_03960) 103626..108767 + 5142 WP_263422647.1 hypothetical protein VF
LDO34_RS19715 (NVI2019_KOLGMIGM_03964) 110601..111848 + 1248 WP_282563837.1 hypothetical protein VF
LDO34_RS19720 (NVI2019_KOLGMIGM_03965) 112031..113242 - 1212 Protein_86 IS3 family transposase ISAlg Transposase
LDO34_RS19725 (NVI2019_KOLGMIGM_03967) 113266..114492 - 1227 WP_282563838.1 hypothetical protein VF
LDO34_RS19730 115402..116348 + 947 Protein_88 IS3 family transposase -
LDO34_RS19735 116363..116614 + 252 Protein_89 helix-turn-helix domain-containing protein -
LDO34_RS19740 (NVI2019_KOLGMIGM_03968) 117042..117320 - 279 WP_036979198.1 ribbon-helix-helix protein, CopG family -
LDO34_RS19745 (NVI2019_KOLGMIGM_03969) 117272..117958 - 687 WP_282563839.1 AAA family ATPase -
LDO34_RS19750 (NVI2019_KOLGMIGM_03971) 118561..119772 + 1212 Protein_92 IS3 family transposase ISAlg Transposase
LDO34_RS19755 (NVI2019_KOLGMIGM_03972) 119818..120165 + 348 WP_051420173.1 ParB/Srx family N-terminal domain-containing protein -
LDO34_RS21070 120186..120308 + 123 WP_263422648.1 hypothetical protein -
LDO34_RS19760 (NVI2019_KOLGMIGM_03973) 120663..120959 + 297 WP_282563840.1 hypothetical protein -
LDO34_RS19765 (NVI2019_KOLGMIGM_03974) 120902..121435 + 534 WP_282563841.1 type-F conjugative transfer system pilin assembly protein TraF -
LDO34_RS19770 121435..121859 + 425 Protein_97 recombinase family protein -
LDO34_RS19775 (NVI2019_KOLGMIGM_03976) 122031..122282 + 252 WP_036974972.1 type II toxin-antitoxin system Phd/YefM family antitoxin Antitoxin Detail
LDO34_RS19780 (NVI2019_KOLGMIGM_03977) 122272..122553 + 282 WP_036979529.1 type II toxin-antitoxin system RelE/ParE family toxin Toxin Detail
LDO34_RS19785 122782..123084 + 303 Protein_100 Tn3 family transposase TnpR_ISYps3 Transposase
LDO34_RS19795 (NVI2019_KOLGMIGM_03979) 123329..123598 + 270 WP_036979554.1 plasmid partitioning/stability family protein -
LDO34_RS19800 (NVI2019_KOLGMIGM_03980) 123793..124071 + 279 WP_230087585.1 S24 family peptidase -
LDO34_RS19805 (NVI2019_KOLGMIGM_03981) 124184..125452 + 1269 WP_036979530.1 translesion error-prone DNA polymerase V subunit UmuC -
LDO34_RS19810 (NVI2019_KOLGMIGM_03982) 125659..125985 + 327 WP_036979532.1 type II toxin-antitoxin system RelE/ParE family toxin -
LDO34_RS19815 (NVI2019_KOLGMIGM_03983) 125972..126244 + 273 WP_036979555.1 helix-turn-helix transcriptional regulator -
LDO34_RS19820 (NVI2019_KOLGMIGM_03984) 126339..126548 + 210 WP_036979533.1 hypothetical protein -
LDO34_RS19825 (NVI2019_KOLGMIGM_03985) 127304..127555 + 252 WP_036979535.1 hypothetical protein -
LDO34_RS19830 (NVI2019_KOLGMIGM_03986) 127597..127959 + 363 WP_282563842.1 hypothetical protein -
LDO34_RS19835 (NVI2019_KOLGMIGM_03987) 128027..128269 + 243 WP_224055086.1 hypothetical protein -
LDO34_RS19840 (NVI2019_KOLGMIGM_03988) 128313..128759 + 447 WP_051459499.1 hypothetical protein -
LDO34_RS19845 (NVI2019_KOLGMIGM_03989) 128790..129122 + 333 WP_051420258.1 N-6 DNA methylase -
LDO34_RS21235 129111..129437 - 327 WP_282563843.1 hypothetical protein -
LDO34_RS19850 (NVI2019_KOLGMIGM_03990) 129491..129766 - 276 WP_036979539.1 type II toxin-antitoxin system RelE/ParE family toxin -
LDO34_RS19855 (NVI2019_KOLGMIGM_03991) 129705..129998 - 294 WP_282563844.1 DUF6290 family protein -
LDO34_RS19860 130562..130986 - 425 Protein_115 transglycosylase SLT domain-containing protein -
LDO34_RS19865 (NVI2019_KOLGMIGM_03993) 131453..131713 + 261 WP_051420257.1 relaxosome protein TraM -
LDO34_RS19870 131970..132185 + 216 WP_282563845.1 hypothetical protein -
LDO34_RS19875 (NVI2019_KOLGMIGM_03994) 133065..133256 + 192 WP_036979543.1 TraY domain-containing protein -
LDO34_RS19880 (NVI2019_KOLGMIGM_03995) 133582..133878 + 297 WP_282563846.1 type IV conjugative transfer system pilin TraA -
LDO34_RS19885 (NVI2019_KOLGMIGM_03996) 133900..134205 + 306 WP_036979544.1 type IV conjugative transfer system protein TraL -
LDO34_RS19890 (NVI2019_KOLGMIGM_03997) 134220..134789 + 570 WP_224051089.1 type IV conjugative transfer system protein TraE -
LDO34_RS19895 (NVI2019_KOLGMIGM_03999) 135018..135365 + 348 WP_224051090.1 hypothetical protein -
LDO34_RS21240 135478..135978 + 501 Protein_123 TrbI/VirB10 family protein -
LDO34_RS19910 (NVI2019_KOLGMIGM_04002) 136390..136877 + 488 Protein_124 transcription/translation regulatory transformer protein RfaH -
LDO34_RS19915 (NVI2019_KOLGMIGM_04003) 136991..137332 + 342 WP_224051091.1 TraV family lipoprotein -
LDO34_RS19920 (NVI2019_KOLGMIGM_04004) 137334..139691 + 2358 WP_224051092.1 type IV secretion system protein TraC -
LDO34_RS19925 (NVI2019_KOLGMIGM_04005) 139719..140045 + 327 WP_224051093.1 hypothetical protein -
LDO34_RS19930 (NVI2019_KOLGMIGM_04006) 140021..140446 + 426 WP_071992439.1 type-F conjugative transfer system protein TrbI -
LDO34_RS19935 140457..141098 + 642 Protein_129 type-F conjugative transfer system protein TraW -
LDO34_RS19940 (NVI2019_KOLGMIGM_04009) 141086..142081 + 996 Protein_130 conjugal transfer pilus assembly protein TraU -
LDO34_RS19945 (NVI2019_KOLGMIGM_04011) 142096..142731 + 636 WP_282563847.1 type-F conjugative transfer system pilin assembly protein TrbC -
LDO34_RS19950 (NVI2019_KOLGMIGM_04012) 142713..143540 + 828 WP_051420221.1 hypothetical protein -
LDO34_RS19955 (NVI2019_KOLGMIGM_04013) 143730..144581 + 852 WP_282563862.1 conjugal transfer protein TraN -
LDO34_RS19960 (NVI2019_KOLGMIGM_04014) 144551..144847 + 297 WP_282563840.1 hypothetical protein -
LDO34_RS19965 (NVI2019_KOLGMIGM_04015) 144790..145323 + 534 WP_282563841.1 type-F conjugative transfer system pilin assembly protein TraF -
LDO34_RS19970 145355..145636 + 282 WP_036978103.1 hypothetical protein -
LDO34_RS19980 (NVI2019_KOLGMIGM_04017) 146164..146442 + 279 WP_036978105.1 type II toxin-antitoxin system RelE/ParE family toxin Toxin Detail
LDO34_RS19985 (NVI2019_KOLGMIGM_04018) 146442..146756 + 315 WP_036978107.1 HigA family addiction module antitoxin Antitoxin Detail
LDO34_RS19995 (NVI2019_KOLGMIGM_04021) 147838..148946 + 1109 Protein_139 conjugal transfer protein TraH -
LDO34_RS20005 150359..151500 - 1142 Protein_140 IS256 family transposase -
LDO34_RS20015 (NVI2019_KOLGMIGM_04026) 152170..152733 - 564 WP_224051097.1 hypothetical protein -
LDO34_RS20020 (NVI2019_KOLGMIGM_04027) 152743..153939 - 1197 WP_224051098.1 hypothetical protein -
LDO34_RS20025 (NVI2019_KOLGMIGM_04028) 153957..156608 - 2652 WP_224051099.1 Outer membrane usher protein FimD VF
LDO34_RS20030 (NVI2019_KOLGMIGM_04029) 156565..157293 - 729 WP_224051100.1 molecular chaperone -
LDO34_RS20035 (NVI2019_KOLGMIGM_04030) 157309..157980 - 672 WP_224051101.1 Chaperone protein FimC VF
LDO34_RS20040 (NVI2019_KOLGMIGM_04031) 158054..158593 - 540 WP_224051102.1 fimbrial protein -
LDO34_RS20045 (NVI2019_KOLGMIGM_04033) 159147..159494 + 348 WP_282563848.1 hypothetical protein -
LDO34_RS20050 (NVI2019_KOLGMIGM_04034) 159467..159679 + 213 WP_224051104.1 hypothetical protein -
LDO34_RS20055 (NVI2019_KOLGMIGM_04035) 159726..160247 + 522 WP_282563849.1 Fic family protein -
LDO34_RS20060 160296..161437 - 1142 Protein_150 IS256 family transposase -

Similar MGE(s)


Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.

Detail Organism MGE type Related TA Genome accession Coordinates Mash
distance