MGE detailed information
MGE type: Conjugative plasmid MGE length: 80027 bp
Accession: NZ_OU342710 Location: 1..80027 Organism: Klebsiella pneumoniae strain Kp1 isolate Kp1 Replicon: plasmid p4
Accession: NZ_OU342710 Location: 1..80027 Organism: Klebsiella pneumoniae strain Kp1 isolate Kp1 Replicon: plasmid p4
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| KXF33_RS28375 (48) | 48..1136 | + | 1089 | WP_021514891.1 | transcriptional repressor PifC | - |
| KXF33_RS28380 (1138) | 1138..3384 | + | 2247 | WP_021514892.1 | P-loop NTPase fold protein | - |
| KXF33_RS29080 (3802) | 3802..3894 | - | 93 | Protein_2 | hypothetical protein | - |
| KXF33_RS28385 (3888) | 3888..6575 | - | 2688 | WP_021514893.1 | hypothetical protein | - |
| KXF33_RS28390 (6805) | 6805..6963 | - | 159 | Protein_4 | type II toxin-antitoxin system antitoxin YacA | - |
| KXF33_RS28395 (7877) | 7877..8734 | - | 858 | WP_000130644.1 | incFII family plasmid replication initiator RepA | - |
| KXF33_RS28400 (8727) | 8727..8801 | - | 75 | WP_001365705.1 | RepA leader peptide Tap | - |
| KXF33_RS28405 (9039) | 9039..9293 | - | 255 | WP_000083830.1 | replication regulatory protein RepA | - |
| KXF33_RS28410 (9533) | 9533..10123 | - | 591 | WP_001629336.1 | DUF2726 domain-containing protein | - |
| KXF33_RS28415 (10162) | 10162..10371 | - | 210 | WP_001299729.1 | hemolysin expression modulator Hha | - |
| KXF33_RS28420 (10417) | 10417..10878 | - | 462 | WP_001825161.1 | thermonuclease family protein | - |
| KXF33_RS28425 (11125) | 11125..11337 | - | 213 | WP_001311693.1 | hypothetical protein | - |
| KXF33_RS28430 (11472) | 11472..12032 | - | 561 | WP_000139310.1 | fertility inhibition protein FinO | - |
| KXF33_RS28435 (12087) | 12087..12833 | - | 747 | WP_100692554.1 | conjugal transfer pilus acetylase TraX | - |
| KXF33_RS28440 (12853) | 12853..18123 | - | 5271 | WP_218065134.1 | Multifunctional conjugation protein TraI | Relaxase |
| KXF33_RS28445 (18123) | 18123..20303 | - | 2181 | WP_052921803.1 | type IV conjugative transfer system coupling protein TraD | - |
| KXF33_RS28450 (20354) | 20354..21094 | - | 741 | WP_021514832.1 | hypothetical protein | - |
| KXF33_RS28455 (21297) | 21297..22028 | - | 732 | WP_000782451.1 | conjugal transfer complement resistance protein TraT | - |
| KXF33_RS28460 (22077) | 22077..22562 | - | 486 | WP_000605868.1 | hypothetical protein | - |
| KXF33_RS28465 (22578) | 22578..25400 | - | 2823 | WP_021532657.1 | conjugal transfer mating-pair stabilization protein TraG | - |
| KXF33_RS28470 (25397) | 25397..26773 | - | 1377 | WP_000982833.1 | conjugal transfer pilus assembly protein TraH | - |
| KXF33_RS28475 (26770) | 26770..27132 | - | 363 | WP_010379880.1 | P-type conjugative transfer protein TrbJ | - |
| KXF33_RS28480 (27062) | 27062..27607 | - | 546 | WP_000052618.1 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
| KXF33_RS28485 (27594) | 27594..27830 | - | 237 | WP_001346259.1 | type-F conjugative transfer system pilin chaperone TraQ | - |
| KXF33_RS28490 (27991) | 27991..28740 | - | 750 | WP_023148232.1 | type-F conjugative transfer system pilin assembly protein TraF | - |
| KXF33_RS28495 (28727) | 28727..28984 | - | 258 | WP_000864341.1 | conjugal transfer protein TrbE | - |
| KXF33_RS28500 (29011) | 29011..30861 | - | 1851 | WP_021537336.1 | type-F conjugative transfer system mating-pair stabilization protein TraN | - |
| KXF33_RS28505 (30858) | 30858..31280 | - | 423 | WP_001229306.1 | HNH endonuclease signature motif containing protein | - |
| KXF33_RS28510 (31305) | 31305..31676 | - | 372 | WP_021514849.1 | hypothetical protein | - |
| KXF33_RS28515 (31673) | 31673..32311 | - | 639 | WP_021514850.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| KXF33_RS28520 (32940) | 32940..33932 | - | 993 | WP_000830838.1 | conjugal transfer pilus assembly protein TraU | - |
| KXF33_RS28525 (33929) | 33929..34561 | - | 633 | WP_001203720.1 | type-F conjugative transfer system protein TraW | - |
| KXF33_RS28530 (34558) | 34558..34944 | - | 387 | WP_021536235.1 | type-F conjugative transfer system protein TrbI | - |
| KXF33_RS28535 (34941) | 34941..37571 | - | 2631 | WP_064558378.1 | type IV secretion system protein TraC | - |
| KXF33_RS28540 (37697) | 37697..38059 | - | 363 | WP_021514859.1 | hypothetical protein | - |
| KXF33_RS29085 (38087) | 38087..38302 | - | 216 | WP_000556747.1 | hypothetical protein | - |
| KXF33_RS28545 (38382) | 38382..38858 | - | 477 | WP_000549580.1 | hypothetical protein | - |
| KXF33_RS28550 (38851) | 38851..39072 | - | 222 | WP_001278695.1 | conjugal transfer protein TraR | - |
| KXF33_RS28555 (39207) | 39207..39722 | - | 516 | WP_021514860.1 | type IV conjugative transfer system lipoprotein TraV | - |
| KXF33_RS28560 (39719) | 39719..39970 | - | 252 | WP_001038348.1 | conjugal transfer protein TrbG | - |
| KXF33_RS28565 (39963) | 39963..40283 | - | 321 | WP_021514862.1 | conjugal transfer protein TrbD | - |
| KXF33_RS28570 (40270) | 40270..40836 | - | 567 | WP_045146963.1 | conjugal transfer pilus-stabilizing protein TraP | - |
| KXF33_RS28575 (40826) | 40826..42277 | - | 1452 | WP_098986942.1 | F-type conjugal transfer pilus assembly protein TraB | - |
| KXF33_RS28580 (42277) | 42277..43005 | - | 729 | WP_001230787.1 | type-F conjugative transfer system secretin TraK | - |
| KXF33_RS28585 (42992) | 42992..43558 | - | 567 | WP_103773446.1 | type IV conjugative transfer system protein TraE | - |
| KXF33_RS28590 (43580) | 43580..43891 | - | 312 | WP_000012106.1 | type IV conjugative transfer system protein TraL | - |
| KXF33_RS28595 (43906) | 43906..44265 | - | 360 | WP_045146959.1 | type IV conjugative transfer system pilin TraA | - |
| KXF33_RS28600 (44299) | 44299..44526 | - | 228 | WP_001254388.1 | conjugal transfer relaxosome protein TraY | - |
| KXF33_RS28605 (44620) | 44620..45306 | - | 687 | WP_045146957.1 | PAS domain-containing protein | - |
| KXF33_RS28610 (45500) | 45500..45883 | - | 384 | WP_001151564.1 | conjugal transfer relaxosome DNA-binding protein TraM | - |
| KXF33_RS28615 (46169) | 46169..46816 | + | 648 | WP_139293854.1 | hypothetical protein | VF |
| KXF33_RS28620 (47113) | 47113..47934 | - | 822 | WP_001234469.1 | DUF932 domain-containing protein | - |
| KXF33_RS28625 (48053) | 48053..48340 | - | 288 | WP_000107542.1 | hypothetical protein | - |
| KXF33_RS28630 (48365) | 48365..48571 | - | 207 | WP_032192990.1 | hypothetical protein | - |
| KXF33_RS29090 (48641) | 48641..48778 | + | 138 | Protein_54 | hypothetical protein | - |
| KXF33_RS29095 (48798) | 48798..49028 | - | 231 | WP_071998556.1 | hypothetical protein | - |
| KXF33_RS28635 (49248) | 49248..49373 | - | 126 | WP_001372321.1 | type I toxin-antitoxin system Hok family toxin | Toxin Detail |
| KXF33_RS29100 (49315) | 49315..49464 | - | 150 | Protein_57 | plasmid maintenance protein Mok | - |
| - (49450) | 49450..49674 | - | 225 | NuclAT_0 | - | Antitoxin Detail |
| - (49450) | 49450..49674 | - | 225 | NuclAT_0 | - | Antitoxin Detail |
| - (49450) | 49450..49674 | - | 225 | NuclAT_0 | - | Antitoxin Detail |
| - (49450) | 49450..49674 | - | 225 | NuclAT_0 | - | Antitoxin Detail |
| KXF33_RS28640 (49685) | 49685..50404 | - | 720 | WP_218065132.1 | plasmid SOS inhibition protein A | - |
| KXF33_RS28645 (50401) | 50401..50835 | - | 435 | WP_064770609.1 | conjugation system SOS inhibitor PsiB | - |
| KXF33_RS28650 (50890) | 50890..52848 | - | 1959 | WP_218065133.1 | ParB/RepB/Spo0J family partition protein | - |
| KXF33_RS28655 (52913) | 52913..53146 | - | 234 | WP_000006030.1 | DUF905 family protein | - |
| KXF33_RS28660 (53208) | 53208..53747 | - | 540 | WP_009426937.1 | single-stranded DNA-binding protein | - |
| KXF33_RS28665 (53773) | 53773..53979 | - | 207 | WP_000547971.1 | hypothetical protein | - |
| KXF33_RS29105 (54220) | 54220..54453 | - | 234 | WP_071588969.1 | hypothetical protein | - |
| KXF33_RS29110 (54390) | 54390..54608 | - | 219 | WP_071588970.1 | hypothetical protein | - |
| KXF33_RS28670 (54605) | 54605..55168 | - | 564 | WP_001330829.1 | class I SAM-dependent methyltransferase | - |
| KXF33_RS28675 (55216) | 55216..56577 | - | 1362 | WP_000170702.1 | DUF3560 domain-containing protein | - |
| KXF33_RS28680 (56629) | 56629..56859 | - | 231 | WP_000218642.1 | hypothetical protein | - |
| KXF33_RS29115 (57377) | 57377..57532 | + | 156 | Protein_69 | hypothetical protein | - |
| KXF33_RS28690 (57898) | 57898..58089 | - | 192 | WP_001027495.1 | hypothetical protein | - |
| KXF33_RS28695 (58086) | 58086..58508 | - | 423 | WP_000271682.1 | DUF1380 family protein | - |
| KXF33_RS28700 (58555) | 58555..58980 | - | 426 | WP_021514795.1 | antirestriction protein | - |
| KXF33_RS28705 (59556) | 59556..60668 | - | 1113 | WP_001300563.1 | IS4 family transposase IS421 | Transposase |
| KXF33_RS28710 (60742) | 60742..61512 | - | 771 | WP_001006200.1 | hypothetical protein | - |
| KXF33_RS28715 (61557) | 61557..62075 | - | 519 | WP_223174655.1 | DUF1380 family protein | - |
| KXF33_RS28720 (62005) | 62005..62226 | - | 222 | WP_001104873.1 | hypothetical protein | - |
| KXF33_RS28725 (62227) | 62227..62910 | - | 684 | WP_021514796.1 | DNA methylase | - |
| KXF33_RS28730 (62987) | 62987..63280 | - | 294 | WP_032146011.1 | hypothetical protein | - |
| KXF33_RS28735 (63428) | 63428..64390 | + | 963 | WP_000959880.1 | plasmid segregation protein ParM | - |
| KXF33_RS28740 (64393) | 64393..64743 | + | 351 | WP_000361384.1 | plasmid partitioning/stability family protein | - |
| KXF33_RS28745 (64894) | 64894..65406 | - | 513 | WP_001027529.1 | hypothetical protein | - |
| KXF33_RS28750 (65847) | 65847..67382 | + | 1536 | WP_001282376.1 | pore-forming bacteriocin colicin B | - |
| KXF33_RS28755 (67400) | 67400..67927 | - | 528 | WP_000203268.1 | colicin B immunity protein | - |
| KXF33_RS28760 (68170) | 68170..68985 | + | 816 | WP_000449473.1 | lipid II-degrading bacteriocin colicin M | - |
| KXF33_RS28765 (69035) | 69035..69388 | - | 354 | WP_000864812.1 | colicin M immunity protein | - |
| KXF33_RS28770 (69561) | 69561..70370 | - | 810 | WP_021514797.1 | site-specific integrase | - |
| KXF33_RS28775 (70371) | 70371..70676 | - | 306 | WP_001159871.1 | type II toxin-antitoxin system toxin CcdB | Toxin Detail |
| KXF33_RS28780 (70678) | 70678..70896 | - | 219 | WP_000813630.1 | type II toxin-antitoxin system antitoxin CcdA | - |
| KXF33_RS28785 (71741) | 71741..72979 | + | 1239 | WP_024188128.1 | 3-oxo-glucose-6-phosphate:glutamate aminotransferase | VF |
| KXF33_RS28790 (72963) | 72963..73793 | + | 831 | WP_016230897.1 | HAD-IIB family hydrolase | - |
| KXF33_RS28795 (73793) | 73793..74809 | + | 1017 | WP_016230896.1 | Gfo/Idh/MocA family oxidoreductase | - |
| KXF33_RS28800 (74811) | 74811..75080 | + | 270 | WP_000379710.1 | SemiSWEET transporter | - |
| KXF33_RS28805 (75077) | 75077..76609 | + | 1533 | WP_001017348.1 | NAD(P)-binding domain-containing protein | - |
| KXF33_RS28810 (76642) | 76642..77094 | - | 453 | WP_000670961.1 | dTDP-3-amino-3,6-dideoxy-alpha-D-galactopyranose 3-N-acetyltransferase | VF |
| KXF33_RS28815 (77423) | 77423..77680 | + | 258 | WP_000371887.1 | hypothetical protein | - |
| KXF33_RS28820 (77680) | 77680..78270 | + | 591 | WP_000194548.1 | hypothetical protein | - |
| KXF33_RS28825 (78288) | 78288..78635 | - | 348 | WP_016230895.1 | DUF6404 family protein | - |
| KXF33_RS28830 (78764) | 78764..79099 | + | 336 | WP_001080729.1 | colicin 1A immunity protein | - |
| KXF33_RS28835 (79121) | 79121..79645 | - | 525 | Protein_99 | colicin-like pore-forming protein | - |
| KXF33_RS28840 (79632) | 79632..80014 | - | 383 | Protein_100 | DUF4238 domain-containing protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|