MGE detailed information
MGE type: Genomic_island MGE length: 10427 bp
Accession: NZ_OU015342 Location: 1027420..1037846 Organism: Salmonella enterica subsp. enterica serovar Typhimurium strain AUSMDU00007171 isolate AUSMDU00007171 Replicon: chromosome
Accession: NZ_OU015342 Location: 1027420..1037846 Organism: Salmonella enterica subsp. enterica serovar Typhimurium strain AUSMDU00007171 isolate AUSMDU00007171 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| KKQ83_RS04915 (1022533) | 1022533..1022913 | + | 381 | WP_001070479.1 | DUF4440 domain-containing protein | - |
| KKQ83_RS04920 (1022969) | 1022969..1025536 | - | 2568 | WP_001005807.1 | DNA mismatch repair protein MutS | - |
| KKQ83_RS04925 (1025695) | 1025695..1026216 | + | 522 | WP_000858988.1 | hypothetical protein | - |
| KKQ83_RS04930 (1026388) | 1026388..1027044 | - | 657 | WP_000420452.1 | protein-serine/threonine phosphatase | - |
| KKQ83_RS04935 (1027391) | 1027391..1027596 | + | 206 | Protein_972 | IS5 family transposase ISEcl3 | Transposase |
| KKQ83_RS04940 (1027669) | 1027669..1028196 | - | 528 | WP_000971655.1 | GNAT family N-acetyltransferase | Toxin Detail |
| KKQ83_RS04945 (1028193) | 1028193..1028483 | - | 291 | WP_000855692.1 | DUF1778 domain-containing protein | Antitoxin Detail |
| KKQ83_RS04950 (1028753) | 1028753..1028931 | - | 179 | Protein_975 | IS3 family transposase | - |
| KKQ83_RS04955 (1029172) | 1029172..1029498 | + | 327 | WP_000393302.1 | hypothetical protein | - |
| KKQ83_RS04960 (1029771) | 1029771..1030118 | - | 348 | WP_001669174.1 | DUF1493 family protein | - |
| KKQ83_RS04965 (1030103) | 1030103..1030552 | - | 450 | WP_000381610.1 | membrane protein | - |
| KKQ83_RS04970 (1030983) | 1030983..1031426 | - | 444 | WP_000715092.1 | Type 3 secretion system pilotin | VF |
| KKQ83_RS04975 (1031883) | 1031883..1032533 | + | 651 | WP_001674874.1 | Invasion protein InvF | VF |
| KKQ83_RS04980 (1032530) | 1032530..1034218 | + | 1689 | WP_000848113.1 | Type 3 secretion system secretin | VF |
| KKQ83_RS04985 (1034215) | 1034215..1035333 | + | 1119 | WP_000612171.1 | Protein MxiC | VF |
| KKQ83_RS04990 (1035358) | 1035358..1037415 | + | 2058 | WP_000927219.1 | Invasion protein InvA | VF |
| KKQ83_RS04995 (1037439) | 1037439..1037846 | + | 408 | WP_001164066.1 | Surface presentation of antigens protein SpaK | VF |
| KKQ83_RS05000 (1037843) | 1037843..1039138 | + | 1296 | WP_000856766.1 | SctN family type III secretion system ATPase InvC | - |
| KKQ83_RS05005 (1039116) | 1039116..1039559 | + | 444 | WP_001520714.1 | SPI-1 type III secretion system protein SpaM | - |
| KKQ83_RS05010 (1039559) | 1039559..1040569 | + | 1011 | WP_000503098.1 | SPI-1 type III secretion system protein SpaN | - |
| KKQ83_RS05015 (1040569) | 1040569..1041480 | + | 912 | WP_000058734.1 | SPI-1 type III secretion system protein SpaO | - |
| KKQ83_RS05020 (1041470) | 1041470..1042144 | + | 675 | WP_000526016.1 | SPI-1 type III secretion system export apparatus protein SpaP | - |
| KKQ83_RS05025 (1042170) | 1042170..1042430 | + | 261 | WP_000342503.1 | SPI-1 type III secretion system export apparatus protein SpaQ | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Salmonella enterica subsp. enterica serovar Typhimurium strain NCTC12023 | Genomic island | TA10052 | UFRD01000002 | 4599654..4610080 | 0 |