MGE detailed information
MGE type: Genomic_island MGE length: 10427 bp
Accession: NZ_OU015340 Location: 4280636..4291062 Organism: Salmonella enterica subsp. enterica serovar Typhimurium strain AUSMDU00027944 isolate AUSMDU00027944 Replicon: chromosome
Accession: NZ_OU015340 Location: 4280636..4291062 Organism: Salmonella enterica subsp. enterica serovar Typhimurium strain AUSMDU00027944 isolate AUSMDU00027944 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| KKR00_RS21495 (4275749) | 4275749..4276129 | + | 381 | WP_001070479.1 | DUF4440 domain-containing protein | - |
| KKR00_RS21500 (4276185) | 4276185..4278752 | - | 2568 | WP_001005807.1 | DNA mismatch repair protein MutS | - |
| KKR00_RS21505 (4278911) | 4278911..4279432 | + | 522 | WP_000858988.1 | hypothetical protein | - |
| KKR00_RS21510 (4279604) | 4279604..4280260 | - | 657 | WP_000420452.1 | protein-serine/threonine phosphatase | - |
| KKR00_RS21515 (4280607) | 4280607..4280812 | + | 206 | Protein_4219 | IS5 family transposase ISEcl3 | Transposase |
| KKR00_RS21520 (4280885) | 4280885..4281412 | - | 528 | WP_000971655.1 | GNAT family N-acetyltransferase | Toxin Detail |
| KKR00_RS21525 (4281409) | 4281409..4281699 | - | 291 | WP_000855692.1 | DUF1778 domain-containing protein | Antitoxin Detail |
| KKR00_RS21530 (4281969) | 4281969..4282147 | - | 179 | Protein_4222 | IS3 family transposase | - |
| KKR00_RS21535 (4282388) | 4282388..4282714 | + | 327 | WP_000393302.1 | hypothetical protein | - |
| KKR00_RS21540 (4282987) | 4282987..4283334 | - | 348 | WP_001669174.1 | DUF1493 family protein | - |
| KKR00_RS21545 (4283319) | 4283319..4283768 | - | 450 | WP_000381610.1 | membrane protein | - |
| KKR00_RS21550 (4284199) | 4284199..4284642 | - | 444 | WP_000715092.1 | Type 3 secretion system pilotin | VF |
| KKR00_RS21555 (4285099) | 4285099..4285749 | + | 651 | WP_001674874.1 | Invasion protein InvF | VF |
| KKR00_RS21560 (4285746) | 4285746..4287434 | + | 1689 | WP_000848113.1 | Type 3 secretion system secretin | VF |
| KKR00_RS21565 (4287431) | 4287431..4288549 | + | 1119 | WP_000612171.1 | Protein MxiC | VF |
| KKR00_RS21570 (4288574) | 4288574..4290631 | + | 2058 | WP_000927219.1 | Invasion protein InvA | VF |
| KKR00_RS21575 (4290655) | 4290655..4291062 | + | 408 | WP_001164066.1 | Surface presentation of antigens protein SpaK | VF |
| KKR00_RS21580 (4291059) | 4291059..4292354 | + | 1296 | WP_000856766.1 | SctN family type III secretion system ATPase InvC | - |
| KKR00_RS21585 (4292332) | 4292332..4292775 | + | 444 | WP_001520714.1 | SPI-1 type III secretion system protein SpaM | - |
| KKR00_RS21590 (4292775) | 4292775..4293785 | + | 1011 | WP_000503098.1 | SPI-1 type III secretion system protein SpaN | - |
| KKR00_RS21595 (4293785) | 4293785..4294696 | + | 912 | WP_000058734.1 | SPI-1 type III secretion system protein SpaO | - |
| KKR00_RS21600 (4294686) | 4294686..4295360 | + | 675 | WP_000526016.1 | SPI-1 type III secretion system export apparatus protein SpaP | - |
| KKR00_RS21605 (4295386) | 4295386..4295646 | + | 261 | WP_000342503.1 | SPI-1 type III secretion system export apparatus protein SpaQ | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Salmonella enterica subsp. enterica serovar Typhimurium strain NCTC12023 | Genomic island | TA10052 | UFRD01000002 | 4599654..4610080 | 0 |