MGE detailed information
MGE type: Prophage MGE length: 49912 bp
Accession: NZ_LT992477 Location: 2436628..2486539 Organism: Staphylococcus aureus isolate 22_LA_562 Replicon: chromosome
Accession: NZ_LT992477 Location: 2436628..2486539 Organism: Staphylococcus aureus isolate 22_LA_562 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| DXE38_RS12320 () | 2431813..2431947 | + | 135 | WP_001549197.1 | delta-lysin family phenol-soluble modulin | - |
| DXE38_RS12325 () | 2432549..2433334 | - | 786 | WP_000867947.1 | carbon-nitrogen family hydrolase | - |
| DXE38_RS12330 () | 2433642..2434268 | - | 627 | WP_000522384.1 | nitroreductase family protein | - |
| DXE38_RS12335 () | 2434465..2435685 | + | 1221 | WP_031868181.1 | hypothetical protein | - |
| DXE38_RS12340 () | 2435710..2436453 | - | 744 | WP_000197638.1 | CPBP family intramembrane metalloprotease | - |
| DXE38_RS12345 () | 2436628..2436912 | + | 285 | WP_000917289.1 | co-chaperone GroES | - |
| DXE38_RS12350 () | 2436988..2438604 | + | 1617 | WP_000240642.1 | 60 kDa chaperonin | VF |
| DXE38_RS12355 () | 2439145..2439324 | + | 180 | WP_000201398.1 | hypothetical protein | - |
| DXE38_RS14990 () | 2439321..2439947 | + | 627 | WP_031775879.1 | hypothetical protein | - |
| DXE38_RS12375 () | 2440486..2441793 | - | 1308 | WP_001045074.1 | potassium transporter KtrB | - |
| DXE38_RS12385 () | 2442176..2443399 | - | 1224 | WP_000206618.1 | ArgE/DapE family deacylase | - |
| DXE38_RS12390 () | 2443831..2444886 | + | 1056 | WP_000791397.1 | putative leukocidin-like protein 2 | VF |
| DXE38_RS12395 () | 2444908..2445924 | + | 1017 | WP_000595612.1 | putative leukocidin-like protein 1 | VF |
| DXE38_RS12400 () | 2446186..2447016 | - | 831 | Protein_2312 | Phospholipase C | VF |
| DXE38_RS12405 () | 2447067..2448104 | - | 1038 | WP_000857191.1 | Tyrosine recombinase XerC ; Integrase | Integrase |
| DXE38_RS12410 () | 2448163..2448627 | - | 465 | WP_000825947.1 | hypothetical protein | - |
| DXE38_RS12415 () | 2448727..2448909 | - | 183 | WP_000705248.1 | hypothetical protein | - |
| DXE38_RS12420 () | 2449113..2449454 | - | 342 | WP_000591749.1 | hypothetical protein | - |
| DXE38_RS12425 () | 2449460..2450392 | - | 933 | WP_000759682.1 | ATP-dependent helicase | - |
| DXE38_RS12430 () | 2450408..2451121 | - | 714 | WP_001031454.1 | XRE family transcriptional regulator | - |
| DXE38_RS12435 () | 2451084..2451257 | + | 174 | WP_001801500.1 | hypothetical protein | - |
| DXE38_RS12440 () | 2451254..2451517 | + | 264 | WP_000854073.1 | helix-turn-helix domain-containing protein | - |
| DXE38_RS12445 () | 2451533..2451748 | + | 216 | WP_001025404.1 | DUF2829 domain-containing protein | - |
| DXE38_RS12450 () | 2451737..2452066 | - | 330 | WP_000128907.1 | hypothetical protein | - |
| DXE38_RS12455 () | 2452117..2452869 | + | 753 | WP_001148605.1 | phage antirepressor KilAC domain-containing protein | - |
| DXE38_RS12460 () | 2452885..2453082 | + | 198 | WP_001148862.1 | hypothetical protein | - |
| DXE38_RS12465 () | 2453069..2453449 | - | 381 | WP_000762519.1 | DUF2513 domain-containing protein | - |
| DXE38_RS12470 () | 2453504..2453827 | + | 324 | WP_001120201.1 | DUF771 domain-containing protein | - |
| DXE38_RS12475 () | 2453824..2453985 | + | 162 | WP_000048129.1 | DUF1270 family protein | - |
| DXE38_RS12480 () | 2454080..2454382 | + | 303 | WP_000165371.1 | DUF2482 family protein | - |
| DXE38_RS12485 () | 2454387..2454647 | + | 261 | WP_000291510.1 | DUF1108 family protein | - |
| DXE38_RS12490 () | 2454656..2454919 | + | 264 | WP_001205732.1 | hypothetical protein | - |
| DXE38_RS12495 () | 2454928..2456871 | + | 1944 | WP_000700555.1 | AAA family ATPase | - |
| DXE38_RS12500 () | 2456873..2457793 | + | 921 | WP_000138475.1 | recombinase RecT | - |
| DXE38_RS12505 () | 2457874..2458491 | + | 618 | WP_073394849.1 | MBL fold metallo-hydrolase | - |
| DXE38_RS12510 () | 2458492..2458962 | + | 471 | WP_000610648.1 | single-stranded DNA-binding protein | - |
| DXE38_RS12515 () | 2458992..2459885 | + | 894 | WP_000148321.1 | DnaD domain-containing protein | - |
| DXE38_RS12520 () | 2459892..2460110 | + | 219 | WP_000338530.1 | hypothetical protein | - |
| DXE38_RS12525 () | 2460119..2460523 | + | 405 | WP_000401960.1 | RusA family crossover junction endodeoxyribonuclease | - |
| DXE38_RS12530 () | 2460536..2460904 | + | 369 | WP_000101288.1 | hypothetical protein | - |
| DXE38_RS12535 () | 2460908..2461150 | + | 243 | WP_000131370.1 | hypothetical protein | - |
| DXE38_RS12540 () | 2461165..2461401 | + | 237 | WP_106095071.1 | DUF1024 family protein | - |
| DXE38_RS12545 () | 2461406..2461948 | + | 543 | Protein_2341 | dUTP pyrophosphatase | - |
| DXE38_RS12550 () | 2461985..2462230 | + | 246 | WP_001282074.1 | hypothetical protein | - |
| DXE38_RS12555 () | 2462227..2462433 | + | 207 | WP_000195803.1 | DUF1381 domain-containing protein | - |
| DXE38_RS12560 () | 2462430..2462816 | + | 387 | WP_000592207.1 | hypothetical protein | - |
| DXE38_RS12565 () | 2462813..2462962 | + | 150 | WP_000595265.1 | transcriptional activator RinB | - |
| DXE38_RS12570 () | 2462962..2463162 | + | 201 | WP_001622114.1 | DUF1514 family protein | - |
| DXE38_RS12575 () | 2463190..2463606 | + | 417 | WP_000590122.1 | hypothetical protein | - |
| DXE38_RS12580 () | 2463838..2464137 | + | 300 | WP_000988336.1 | HNH endonuclease | - |
| DXE38_RS12585 () | 2464268..2464612 | + | 345 | WP_000402904.1 | hypothetical protein | - |
| DXE38_RS12590 () | 2464609..2466270 | + | 1662 | WP_000625088.1 | terminase large subunit | - |
| DXE38_RS12595 () | 2466286..2467473 | + | 1188 | WP_000025274.1 | phage portal protein | - |
| DXE38_RS12600 () | 2467457..2468194 | + | 738 | WP_000642728.1 | Clp protease ClpP | - |
| DXE38_RS12605 () | 2468218..2469363 | + | 1146 | WP_000154559.1 | phage major capsid protein | - |
| DXE38_RS12610 () | 2469383..2469667 | + | 285 | WP_000238236.1 | hypothetical protein | - |
| DXE38_RS12615 () | 2469657..2469941 | + | 285 | WP_000150936.1 | phage head-tail adapter protein | - |
| DXE38_RS12620 () | 2469925..2470287 | + | 363 | WP_000755150.1 | head-tail adaptor protein | - |
| DXE38_RS12625 () | 2470284..2470688 | + | 405 | WP_000114227.1 | HK97 gp10 family phage protein | - |
| DXE38_RS12630 () | 2470685..2471092 | + | 408 | WP_000565498.1 | hypothetical protein | - |
| DXE38_RS12635 () | 2471093..2471737 | + | 645 | WP_000268733.1 | phage tail protein | - |
| DXE38_RS12640 () | 2471779..2472003 | + | 225 | WP_071621395.1 | Ig-like domain-containing protein | - |
| DXE38_RS12645 () | 2472053..2472403 | + | 351 | WP_001096355.1 | hypothetical protein | - |
| DXE38_RS14995 () | 2472454..2472591 | + | 138 | WP_001549167.1 | hypothetical protein | - |
| DXE38_RS12650 () | 2472648..2477177 | + | 4530 | WP_001796452.1 | phage tail tape measure protein | - |
| DXE38_RS12655 () | 2477174..2478658 | + | 1485 | WP_000567408.1 | phage tail family protein | - |
| DXE38_RS12660 () | 2478674..2482459 | + | 3786 | WP_000582165.1 | hypothetical protein | - |
| DXE38_RS12665 () | 2482449..2482601 | + | 153 | WP_001153681.1 | hypothetical protein | - |
| DXE38_RS12670 () | 2482648..2482935 | + | 288 | WP_001040261.1 | hypothetical protein | - |
| DXE38_RS12675 () | 2482993..2483289 | + | 297 | WP_000539688.1 | DUF2951 domain-containing protein | - |
| DXE38_RS12680 () | 2483439..2483615 | + | 177 | WP_011447039.1 | putative holin-like toxin | Toxin Detail |
| - () | 2483607..2483746 | - | 140 | NuclAT_0 | - | Antitoxin Detail |
| - () | 2483607..2483746 | - | 140 | NuclAT_0 | - | Antitoxin Detail |
| - () | 2483607..2483746 | - | 140 | NuclAT_0 | - | Antitoxin Detail |
| - () | 2483607..2483746 | - | 140 | NuclAT_0 | - | Antitoxin Detail |
| DXE38_RS12685 () | 2483668..2483775 | - | 108 | WP_001791821.1 | hypothetical protein | - |
| DXE38_RS12690 () | 2483827..2484081 | + | 255 | WP_000611512.1 | phage holin | - |
| DXE38_RS12695 () | 2484093..2484848 | + | 756 | WP_064131634.1 | CHAP domain-containing protein | - |
| DXE38_RS12700 () | 2485039..2485530 | + | 492 | WP_000919350.1 | Staphylokinase | VF |
| DXE38_RS12705 () | 2486189..2486539 | + | 351 | WP_000702263.1 | Staphylococcal complement inhibitor | VF |
| DXE38_RS12710 () | 2486592..2486852 | - | 261 | WP_001791826.1 | hypothetical protein | - |
| DXE38_RS12720 () | 2487163..2487342 | - | 180 | WP_000669789.1 | hypothetical protein | - |
| DXE38_RS12725 () | 2487664..2487911 | - | 248 | Protein_2377 | sphingomyelin phosphodiesterase | - |
| DXE38_RS12730 () | 2488300..2490369 | + | 2070 | WP_000669725.1 | extracellular adherence protein Eap/Map | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|