MGE detailed information
MGE type: Prophage MGE length: 56570 bp
Accession: NZ_LT992464 Location: 2273235..2329804 Organism: Staphylococcus aureus isolate 3_LA_115 Replicon: chromosome
Accession: NZ_LT992464 Location: 2273235..2329804 Organism: Staphylococcus aureus isolate 3_LA_115 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| DXE56_RS11985 () | 2268333..2268665 | - | 333 | WP_000731878.1 | glycine cleavage system protein H | - |
| DXE56_RS11990 () | 2268699..2269700 | - | 1002 | WP_000240067.1 | LLM class flavin-dependent oxidoreductase | - |
| DXE56_RS11995 () | 2269814..2269906 | - | 93 | WP_014936975.1 | hypothetical protein | - |
| DXE56_RS12000 () | 2270002..2271216 | + | 1215 | WP_000286472.1 | NADH-dependent flavin oxidoreductase | - |
| DXE56_RS12005 () | 2271274..2272101 | + | 828 | WP_000136026.1 | alpha/beta hydrolase | - |
| DXE56_RS12020 () | 2273235..2274689 | - | 1455 | WP_021285991.1 | N-acetylmuramoyl-L-alanine amidase | - |
| DXE56_RS12025 () | 2274701..2275003 | - | 303 | WP_000339146.1 | phage holin | - |
| DXE56_RS12030 () | 2275139..2275438 | - | 300 | WP_000466775.1 | DUF2951 family protein | - |
| DXE56_RS12035 () | 2275484..2275648 | - | 165 | WP_000916022.1 | XkdX family protein | - |
| DXE56_RS12040 () | 2275641..2276030 | - | 390 | WP_031910402.1 | DUF2977 domain-containing protein | - |
| DXE56_RS12045 () | 2276030..2277496 | - | 1467 | WP_031584731.1 | BppU family phage baseplate upper protein | - |
| DXE56_RS12050 () | 2277496..2279406 | - | 1911 | WP_000429558.1 | minor structural protein | - |
| DXE56_RS12055 () | 2279422..2279712 | - | 291 | WP_000179858.1 | hypothetical protein | - |
| DXE56_RS12060 () | 2279712..2281295 | - | 1584 | WP_000384474.1 | prophage endopeptidase tail family protein | - |
| DXE56_RS12065 () | 2281304..2282128 | - | 825 | WP_001190533.1 | phage tail family protein | - |
| DXE56_RS12070 () | 2282128..2288328 | - | 6201 | WP_031882235.1 | phage tail tape measure protein | - |
| DXE56_RS12075 () | 2288342..2288500 | - | 159 | WP_000438833.1 | hypothetical protein | - |
| DXE56_RS12080 () | 2288542..2288892 | - | 351 | WP_031775785.1 | hypothetical protein | - |
| DXE56_RS12085 () | 2288950..2289405 | - | 456 | WP_000169128.1 | Ig domain-containing protein | - |
| DXE56_RS12090 () | 2289497..2290138 | - | 642 | WP_031795557.1 | tail protein | - |
| DXE56_RS12095 () | 2290173..2290568 | - | 396 | WP_001023808.1 | DUF3168 domain-containing protein | - |
| DXE56_RS12100 () | 2290569..2290970 | - | 402 | WP_000110017.1 | hypothetical protein | - |
| DXE56_RS12105 () | 2290967..2291299 | - | 333 | WP_016187452.1 | hypothetical protein | - |
| DXE56_RS12110 () | 2291311..2291589 | - | 279 | WP_000050973.1 | head-tail connector protein | - |
| DXE56_RS12115 () | 2291658..2292821 | - | 1164 | WP_001142738.1 | phage major capsid protein | - |
| DXE56_RS12120 () | 2292833..2293606 | - | 774 | WP_021285854.1 | Clp protease ClpP | - |
| DXE56_RS12125 () | 2293590..2294828 | - | 1239 | WP_031796928.1 | phage portal protein | - |
| DXE56_RS12130 () | 2294833..2296524 | - | 1692 | WP_031796929.1 | terminase large subunit | - |
| DXE56_RS12135 () | 2296514..2296819 | - | 306 | WP_000778933.1 | P27 family phage terminase small subunit | - |
| DXE56_RS12140 () | 2296947..2297261 | - | 315 | WP_031915356.1 | HNH endonuclease | - |
| DXE56_RS12145 () | 2297418..2297855 | - | 438 | WP_031867792.1 | transcriptional regulator | - |
| DXE56_RS12150 () | 2297868..2299235 | - | 1368 | WP_078066486.1 | DEAD/DEAH box helicase | - |
| DXE56_RS12155 () | 2299216..2299506 | - | 291 | WP_031790894.1 | VRR-NUC domain-containing protein | - |
| DXE56_RS12160 () | 2299640..2299738 | + | 99 | WP_001801650.1 | hypothetical protein | - |
| DXE56_RS12165 () | 2299847..2302294 | - | 2448 | WP_031915355.1 | virulence-associated E family protein | - |
| DXE56_RS12170 () | 2302346..2302546 | - | 201 | WP_000265251.1 | DUF1514 family protein | - |
| DXE56_RS12175 () | 2302614..2302766 | - | 153 | WP_031915354.1 | transcriptional regulator | - |
| DXE56_RS12180 () | 2302766..2303149 | - | 384 | WP_031915353.1 | phage protein | - |
| DXE56_RS12185 () | 2303146..2303352 | - | 207 | WP_000195803.1 | DUF1381 domain-containing protein | - |
| DXE56_RS12190 () | 2303389..2303901 | - | 513 | WP_031915352.1 | dUTP pyrophosphatase | - |
| DXE56_RS12195 () | 2303894..2304142 | - | 249 | WP_001065080.1 | DUF1024 family protein | - |
| DXE56_RS12200 () | 2304135..2304500 | - | 366 | WP_001105602.1 | hypothetical protein | - |
| DXE56_RS12205 () | 2304497..2304934 | - | 438 | WP_000982714.1 | hypothetical protein | - |
| DXE56_RS12210 () | 2304931..2305125 | - | 195 | WP_000983950.1 | hypothetical protein | - |
| DXE56_RS12215 () | 2305122..2305529 | - | 408 | WP_000695771.1 | hypothetical protein | - |
| DXE56_RS12220 () | 2305532..2305738 | - | 207 | WP_000693989.1 | hypothetical protein | - |
| DXE56_RS12225 () | 2305752..2306000 | - | 249 | WP_031915351.1 | phage protein | - |
| DXE56_RS12230 () | 2306001..2306360 | - | 360 | WP_000029381.1 | hypothetical protein | - |
| DXE56_RS12235 () | 2306488..2306793 | - | 306 | WP_000101252.1 | hypothetical protein | - |
| DXE56_RS12240 () | 2306794..2306979 | - | 186 | WP_001187243.1 | DUF3113 family protein | - |
| DXE56_RS12245 () | 2306979..2307134 | - | 156 | WP_000152769.1 | hypothetical protein | - |
| DXE56_RS12250 () | 2307146..2309098 | - | 1953 | WP_078100362.1 | DNA polymerase | - |
| DXE56_RS12255 () | 2309167..2309724 | - | 558 | WP_031915349.1 | DUF2815 family protein | - |
| DXE56_RS12260 () | 2309750..2310916 | - | 1167 | WP_000762545.1 | DUF2800 domain-containing protein | - |
| DXE56_RS12265 () | 2310913..2311275 | - | 363 | WP_000985976.1 | hypothetical protein | - |
| DXE56_RS12270 () | 2311290..2311613 | - | 324 | WP_000174994.1 | hypothetical protein | - |
| DXE56_RS12275 () | 2311692..2311853 | - | 162 | WP_001285963.1 | DUF1270 family protein | - |
| DXE56_RS12280 () | 2311866..2312129 | - | 264 | WP_001124190.1 | helix-turn-helix domain-containing protein | - |
| DXE56_RS12285 () | 2312154..2312369 | - | 216 | WP_001036302.1 | hypothetical protein | - |
| DXE56_RS12290 () | 2312424..2312789 | + | 366 | WP_001128433.1 | hypothetical protein | Antitoxin Detail |
| DXE56_RS12295 () | 2312758..2313003 | - | 246 | WP_001025401.1 | DUF2829 domain-containing protein | Toxin Detail |
| DXE56_RS12300 () | 2313059..2313268 | + | 210 | WP_000642492.1 | hypothetical protein | - |
| DXE56_RS12305 () | 2313258..2313401 | - | 144 | WP_000939498.1 | hypothetical protein | - |
| DXE56_RS12310 () | 2313430..2314206 | - | 777 | WP_001148544.1 | Rha family transcriptional regulator | - |
| DXE56_RS12315 () | 2314220..2314456 | - | 237 | WP_001121027.1 | helix-turn-helix domain-containing protein | - |
| DXE56_RS12320 () | 2314608..2314922 | + | 315 | WP_000333630.1 | helix-turn-helix domain-containing protein | Antitoxin Detail |
| DXE56_RS12325 () | 2314935..2315396 | + | 462 | WP_000525004.1 | hypothetical protein | Toxin Detail |
| DXE56_RS12330 () | 2315414..2315998 | + | 585 | WP_000825948.1 | hypothetical protein | - |
| DXE56_RS12335 () | 2316228..2316374 | + | 147 | WP_001013104.1 | hypothetical protein | - |
| DXE56_RS12340 () | 2316371..2316985 | - | 615 | WP_000191461.1 | hypothetical protein | - |
| DXE56_RS12345 () | 2317095..2318300 | + | 1206 | WP_000264185.1 | Tyrosine recombinase XerC ; Integrase | Integrase |
| DXE56_RS12350 () | 2318394..2320328 | - | 1935 | Protein_2276 | Lipase 2 | VF |
| DXE56_RS12355 () | 2320745..2322058 | + | 1314 | WP_001077706.1 | YjiH family protein | - |
| DXE56_RS12360 () | 2322188..2322856 | - | 669 | WP_000936721.1 | N-acetylmannosamine-6-phosphate 2-epimerase | - |
| DXE56_RS12365 () | 2322996..2323796 | + | 801 | WP_000667388.1 | MurR/RpiR family transcriptional regulator | - |
| DXE56_RS12370 () | 2324073..2324933 | - | 861 | WP_000291432.1 | ROK family protein | - |
| DXE56_RS12375 () | 2325091..2325972 | + | 882 | WP_001030735.1 | N-acetylneuraminate lyase | - |
| DXE56_RS12380 () | 2326012..2327544 | + | 1533 | WP_000665744.1 | sodium:solute symporter | - |
| DXE56_RS12385 () | 2327650..2328870 | - | 1221 | WP_001022977.1 | NupC/NupG family nucleoside CNT transporter | - |
| DXE56_RS12390 () | 2328881..2329804 | - | 924 | WP_000002071.1 | pseudouridine-5'-phosphate glycosidase | - |
| DXE56_RS12395 () | 2329779..2330897 | - | 1119 | WP_001283977.1 | winged helix-turn-helix transcriptional regulator | - |
| DXE56_RS12400 () | 2331240..2332271 | - | 1032 | WP_000364856.1 | PTS sugar transporter subunit IIC | - |
| DXE56_RS12410 () | 2332479..2333156 | - | 678 | WP_000911019.1 | ABC transporter ATP-binding protein | - |
| DXE56_RS12415 () | 2333169..2334218 | - | 1050 | WP_000477931.1 | ABC transporter permease | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|