MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 121227 bp
Accession: NZ_LT992460 Location: 139209..260435 Organism: Staphylococcus aureus isolate 9_LA_281 Replicon: chromosome
Accession: NZ_LT992460 Location: 139209..260435 Organism: Staphylococcus aureus isolate 9_LA_281 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| DXE39_RS00685 () | 134566..135108 | - | 543 | WP_000638622.1 | GNAT family N-acetyltransferase | - |
| DXE39_RS00690 () | 135188..135487 | - | 300 | WP_000545113.1 | hypothetical protein | - |
| DXE39_RS00695 () | 135625..136008 | - | 384 | WP_000733445.1 | hypothetical protein | - |
| DXE39_RS00700 () | 136075..136518 | - | 444 | WP_001259673.1 | GNAT family N-acetyltransferase | - |
| DXE39_RS00705 () | 136645..137280 | + | 636 | Protein_131 | DUF1129 family protein | - |
| DXE39_RS00710 () | 137434..137922 | - | 489 | WP_000152580.1 | DUF456 domain-containing protein | - |
| DXE39_RS00715 () | 137919..139139 | - | 1221 | WP_000367065.1 | sugar efflux transporter | - |
| DXE39_RS00720 () | 139635..140501 | - | 867 | WP_000687413.1 | LysR family transcriptional regulator | - |
| DXE39_RS00725 () | 140618..141262 | - | 645 | WP_000865619.1 | DUF402 domain-containing protein | - |
| DXE39_RS00730 () | 141614..142087 | - | 474 | WP_000833486.1 | cupin domain-containing protein | - |
| DXE39_RS00735 () | 142087..142803 | - | 717 | WP_000532971.1 | putative transcriptional regulatory protein | VF |
| DXE39_RS00740 () | 142993..143352 | - | 360 | WP_001805574.1 | HTH-type transcriptional regulator SarX | - |
| DXE39_RS00745 () | 143498..145648 | - | 2151 | WP_001129746.1 | HTH-type transcriptional activator RhaR | VF |
| DXE39_RS00750 () | 146345..146989 | - | 645 | WP_031795498.1 | Bax inhibitor-1 family protein | - |
| DXE39_RS00755 () | 147350..148147 | + | 798 | WP_000731644.1 | putative autolysin SsaALP | VF |
| DXE39_RS00760 () | 148729..149736 | - | 1008 | WP_031795497.1 | inorganic phosphate transporter | - |
| DXE39_RS00765 () | 149752..150369 | - | 618 | WP_000491755.1 | DUF47 domain-containing protein | - |
| DXE39_RS00770 () | 150985..152874 | - | 1890 | WP_000009400.1 | ABC transporter permease | - |
| DXE39_RS00775 () | 152864..153625 | - | 762 | WP_000153733.1 | Bacitracin export ATP-binding protein BceA | VF |
| DXE39_RS00780 () | 153772..154812 | - | 1041 | WP_001061267.1 | histidine kinase GraS/ApsS | - |
| DXE39_RS00785 () | 154805..155479 | - | 675 | WP_001166506.1 | Response regulator protein GraR | VF |
| DXE39_RS00790 () | 155495..156418 | - | 924 | WP_000802948.1 | auxiliary protein GraX/ApsX | - |
| DXE39_RS00795 () | 156531..157037 | + | 507 | WP_000940129.1 | GNAT family N-acetyltransferase | - |
| DXE39_RS00800 () | 157245..157673 | - | 429 | WP_000198503.1 | hypothetical protein | - |
| DXE39_RS00810 () | 158003..159046 | - | 1044 | WP_001030759.1 | alpha/beta hydrolase | - |
| DXE39_RS00815 () | 159197..160264 | - | 1068 | WP_000980142.1 | membrane protein | - |
| DXE39_RS00820 () | 160720..161217 | - | 498 | WP_001164085.1 | hypothetical protein | - |
| DXE39_RS00825 () | 161333..161695 | - | 363 | WP_001124165.1 | PTS-dependent dihydroxyacetone kinase phosphotransferase subunit DhaM | - |
| DXE39_RS00830 () | 161688..162272 | - | 585 | WP_000867211.1 | dihydroxyacetone kinase subunit L | - |
| DXE39_RS00835 () | 162314..163282 | - | 969 | WP_000976255.1 | dihydroxyacetone kinase subunit DhaK | - |
| DXE39_RS00840 () | 163516..164532 | - | 1017 | WP_000625890.1 | Iron-uptake system permease protein FeuC | VF |
| DXE39_RS00845 () | 164529..165533 | - | 1005 | WP_000184742.1 | Iron-uptake system permease protein FeuB | VF |
| DXE39_RS00850 () | 165569..166366 | - | 798 | WP_001080809.1 | Ferric enterobactin transport ATP-binding protein FepC | VF |
| DXE39_RS00855 () | 166616..166900 | + | 285 | WP_000134547.1 | hypothetical protein | - |
| DXE39_RS00860 () | 167051..167371 | + | 321 | WP_000805733.1 | DUF961 family protein | - |
| DXE39_RS00865 () | 167385..167687 | + | 303 | WP_000386892.1 | hypothetical protein | - |
| DXE39_RS00870 () | 167862..168953 | + | 1092 | WP_000172943.1 | replication initiation factor domain-containing protein | - |
| DXE39_RS00875 () | 169014..170069 | + | 1056 | WP_000692002.1 | conjugal transfer protein | - |
| DXE39_RS00880 () | 170074..170334 | + | 261 | WP_000015639.1 | hypothetical protein | - |
| DXE39_RS00885 () | 170346..170729 | + | 384 | WP_000358144.1 | hypothetical protein | - |
| DXE39_RS00890 () | 170764..173259 | + | 2496 | WP_001049262.1 | ATP-binding protein | - |
| DXE39_RS00895 () | 173313..174671 | + | 1359 | WP_001251201.1 | cell division protein FtsK | - |
| DXE39_RS00900 () | 174676..176523 | + | 1848 | WP_000681143.1 | membrane protein | - |
| DXE39_RS00905 () | 176513..177559 | + | 1047 | WP_000247473.1 | hypothetical protein | VF |
| DXE39_RS00910 () | 177566..178156 | + | 591 | WP_000810443.1 | hypothetical protein | - |
| DXE39_RS00915 () | 178212..178553 | + | 342 | WP_001255377.1 | cystatin-like fold lipoprotein | - |
| DXE39_RS00920 () | 178662..179165 | + | 504 | WP_000746372.1 | IS30 family transposase ISSau5 | Transposase |
| DXE39_RS00925 () | 179146..179682 | + | 537 | WP_107399907.1 | IS30 family transposase ISSau5 | Transposase |
| DXE39_RS00930 () | 179990..180823 | - | 834 | WP_001044664.1 | YitT family protein | - |
| DXE39_RS00935 () | 181001..181093 | - | 93 | WP_001788321.1 | hypothetical protein | - |
| DXE39_RS00940 () | 181521..181700 | + | 180 | WP_000669789.1 | hypothetical protein | - |
| DXE39_RS00950 () | 182011..182271 | + | 261 | WP_001791826.1 | hypothetical protein | - |
| DXE39_RS00955 () | 182324..182674 | - | 351 | WP_000702263.1 | Staphylococcal complement inhibitor | VF |
| DXE39_RS00960 () | 183360..183809 | + | 450 | WP_000727649.1 | Chemotaxis inhibitory protein | VF |
| DXE39_RS00965 () | 183904..184239 | - | 336 | Protein_181 | SH3 domain-containing protein | - |
| DXE39_RS00975 () | 184889..185380 | - | 492 | WP_000919350.1 | Staphylokinase | VF |
| DXE39_RS00980 () | 185571..186326 | - | 756 | WP_000861038.1 | CHAP domain-containing protein | - |
| DXE39_RS00985 () | 186338..186592 | - | 255 | WP_000611512.1 | phage holin | - |
| DXE39_RS00990 () | 186644..186751 | + | 108 | WP_001791821.1 | hypothetical protein | - |
| - () | 186673..186812 | + | 140 | NuclAT_0 | - | Antitoxin Detail |
| - () | 186673..186812 | + | 140 | NuclAT_0 | - | Antitoxin Detail |
| - () | 186673..186812 | + | 140 | NuclAT_0 | - | Antitoxin Detail |
| - () | 186673..186812 | + | 140 | NuclAT_0 | - | Antitoxin Detail |
| DXE39_RS00995 () | 186804..186980 | - | 177 | WP_011447039.1 | putative holin-like toxin | Toxin Detail |
| DXE39_RS01000 () | 187089..187862 | - | 774 | WP_000750406.1 | Enterotoxin type A | VF |
| DXE39_RS01010 () | 188283..188657 | - | 375 | WP_000340977.1 | hypothetical protein | - |
| DXE39_RS01015 () | 188713..189000 | - | 288 | WP_001040259.1 | hypothetical protein | - |
| DXE39_RS01020 () | 189047..189199 | - | 153 | WP_001153681.1 | hypothetical protein | - |
| DXE39_RS01025 () | 189189..192974 | - | 3786 | WP_000582190.1 | hypothetical protein | - |
| DXE39_RS01030 () | 192990..194474 | - | 1485 | WP_114647891.1 | phage tail family protein | - |
| DXE39_RS01035 () | 194471..199000 | - | 4530 | WP_114647892.1 | phage tail tape measure protein | - |
| DXE39_RS15170 () | 199057..199194 | - | 138 | WP_001549167.1 | hypothetical protein | - |
| DXE39_RS01040 () | 199245..199595 | - | 351 | WP_001096355.1 | hypothetical protein | - |
| DXE39_RS01045 () | 199645..199950 | - | 306 | WP_114647941.1 | Ig-like domain-containing protein | - |
| DXE39_RS01050 () | 199911..200552 | - | 642 | WP_114647893.1 | phage tail protein | - |
| DXE39_RS01055 () | 200553..200960 | - | 408 | WP_086095461.1 | hypothetical protein | - |
| DXE39_RS01060 () | 200957..201361 | - | 405 | WP_000114341.1 | HK97 gp10 family phage protein | - |
| DXE39_RS01065 () | 201358..201720 | - | 363 | WP_000755150.1 | head-tail adaptor protein | - |
| DXE39_RS01070 () | 201704..201988 | - | 285 | WP_000150936.1 | phage head-tail adapter protein | - |
| DXE39_RS01075 () | 201978..202262 | - | 285 | WP_000238239.1 | hypothetical protein | - |
| DXE39_RS01080 () | 202282..203427 | - | 1146 | WP_000154569.1 | phage major capsid protein | - |
| DXE39_RS01085 () | 203450..204187 | - | 738 | WP_114647894.1 | Clp protease ClpP | - |
| DXE39_RS01090 () | 204171..205358 | - | 1188 | WP_000025266.1 | phage portal protein | - |
| DXE39_RS01095 () | 205374..207035 | - | 1662 | WP_000625087.1 | terminase large subunit | - |
| DXE39_RS01100 () | 207032..207376 | - | 345 | WP_000402904.1 | hypothetical protein | - |
| DXE39_RS01105 () | 207507..207806 | - | 300 | WP_000988336.1 | HNH endonuclease | - |
| DXE39_RS01110 () | 208038..208454 | - | 417 | WP_000590122.1 | hypothetical protein | - |
| DXE39_RS01115 () | 208482..208682 | - | 201 | WP_000265043.1 | DUF1514 family protein | - |
| DXE39_RS01120 () | 208682..208831 | - | 150 | WP_000595265.1 | transcriptional activator RinB | - |
| DXE39_RS01125 () | 208828..209214 | - | 387 | WP_000592207.1 | hypothetical protein | - |
| DXE39_RS01130 () | 209211..209417 | - | 207 | WP_000195803.1 | DUF1381 domain-containing protein | - |
| DXE39_RS01135 () | 209454..209996 | - | 543 | WP_114647895.1 | dUTP pyrophosphatase | - |
| DXE39_RS01140 () | 209989..210171 | - | 183 | WP_000028422.1 | hypothetical protein | Antitoxin Detail |
| DXE39_RS01145 () | 210161..210412 | - | 252 | WP_001065091.1 | DUF1024 family protein | Toxin Detail |
| DXE39_RS15175 () | 210405..210572 | - | 168 | WP_001624242.1 | hypothetical protein | - |
| DXE39_RS01150 () | 210584..210826 | - | 243 | WP_000131381.1 | phi PVL orf 51-like protein | - |
| DXE39_RS01155 () | 210830..211198 | - | 369 | WP_000101270.1 | hypothetical protein | - |
| DXE39_RS01160 () | 211211..211615 | - | 405 | WP_000401964.1 | RusA family crossover junction endodeoxyribonuclease | - |
| DXE39_RS01165 () | 211624..211842 | - | 219 | WP_000338528.1 | hypothetical protein | - |
| DXE39_RS01170 () | 211849..212733 | - | 885 | WP_000148298.1 | DnaD domain protein | - |
| DXE39_RS01175 () | 212763..213233 | - | 471 | WP_000934770.1 | single-stranded DNA-binding protein | - |
| DXE39_RS01180 () | 213234..213851 | - | 618 | WP_071621397.1 | MBL fold metallo-hydrolase | - |
| DXE39_RS01185 () | 213932..214852 | - | 921 | WP_000138475.1 | recombinase RecT | - |
| DXE39_RS01190 () | 214854..216809 | - | 1956 | WP_064127293.1 | AAA family ATPase | - |
| DXE39_RS01195 () | 216806..217069 | - | 264 | WP_114647896.1 | hypothetical protein | - |
| DXE39_RS01200 () | 217078..217338 | - | 261 | WP_000291488.1 | hypothetical protein ; Integrase | Integrase |
| DXE39_RS01205 () | 217431..217592 | - | 162 | WP_000066011.1 | DUF1270 domain-containing protein | - |
| DXE39_RS01210 () | 217589..217909 | - | 321 | WP_001120936.1 | DUF771 domain-containing protein | - |
| DXE39_RS15115 () | 217985..218122 | - | 138 | WP_001662405.1 | hypothetical protein | - |
| DXE39_RS01215 () | 218142..218402 | - | 261 | WP_000435343.1 | hypothetical protein | - |
| DXE39_RS01220 () | 218415..219164 | - | 750 | WP_114647897.1 | phage antirepressor KilAC domain-containing protein | - |
| DXE39_RS01225 () | 219221..219431 | + | 211 | Protein_234 | hypothetical protein | - |
| DXE39_RS01230 () | 219424..219564 | - | 141 | WP_000939495.1 | hypothetical protein | - |
| DXE39_RS01235 () | 219579..220022 | - | 444 | WP_001662741.1 | hypothetical protein | - |
| DXE39_RS01240 () | 220035..220277 | - | 243 | WP_000639923.1 | DUF739 family protein | - |
| DXE39_RS01245 () | 220441..221157 | + | 717 | WP_001083975.1 | LexA family transcriptional regulator | - |
| DXE39_RS01250 () | 221169..222023 | + | 855 | WP_114647898.1 | HIRAN domain-containing protein | - |
| DXE39_RS15180 () | 222097..222243 | + | 147 | WP_000345949.1 | hypothetical protein | - |
| DXE39_RS01255 () | 222240..222425 | + | 186 | WP_000109189.1 | hypothetical protein | - |
| DXE39_RS01260 () | 222496..222678 | + | 183 | WP_000705240.1 | hypothetical protein | - |
| DXE39_RS01265 () | 222756..223469 | + | 714 | WP_001549185.1 | type II toxin-antitoxin system PemK/MazF family toxin | - |
| DXE39_RS01270 () | 223661..224698 | + | 1038 | WP_114647899.1 | Tyrosine recombinase XerC ; Integrase | Integrase |
| DXE39_RS01275 () | 224983..226212 | - | 1230 | WP_000479274.1 | NupC/NupG family nucleoside CNT transporter | - |
| DXE39_RS01280 () | 226571..228298 | - | 1728 | WP_000817954.1 | Multidrug resistance ABC transporter ATP-binding/permease protein BmrA | VF |
| DXE39_RS01285 () | 228719..230014 | + | 1296 | WP_000793054.1 | penicillin-binding protein PBP4 | - |
| DXE39_RS01290 () | 230131..230529 | - | 399 | WP_000832260.1 | glycerol-3-phosphate cytidylyltransferase | - |
| DXE39_RS01295 () | 230592..231653 | - | 1062 | WP_001241202.1 | glycosyltransferase family 2 protein | - |
| DXE39_RS01300 () | 231650..232753 | - | 1104 | WP_001101610.1 | CDP-glycerol glycerophosphotransferase family protein | - |
| DXE39_RS01305 () | 232852..233664 | - | 813 | WP_001273058.1 | teichoic acids export ABC transporter permease subunit TagG | - |
| DXE39_RS01310 () | 234011..234805 | + | 795 | WP_001103232.1 | Teichoic acids export ATP-binding protein TagH | VF |
| DXE39_RS01315 () | 234865..235629 | - | 765 | WP_000215383.1 | WecB/TagA/CpsF family glycosyltransferase | - |
| DXE39_RS01320 () | 235865..236617 | + | 753 | WP_001108545.1 | M50 family metallopeptidase | - |
| DXE39_RS01325 () | 236697..237341 | - | 645 | WP_000954654.1 | HTH-type transcriptional regulator MntR | VF |
| DXE39_RS01330 () | 237463..238206 | + | 744 | WP_000894464.1 | Manganese transport system ATP-binding protein MntB | VF |
| DXE39_RS01335 () | 238200..239036 | + | 837 | WP_000889252.1 | Manganese transport system membrane protein MntB | VF |
| DXE39_RS01340 () | 239033..239962 | + | 930 | WP_000737654.1 | Manganese-binding lipoprotein MntA | VF |
| DXE39_RS01345 () | 241054..243096 | - | 2043 | WP_000402172.1 | sodium:proton antiporter | - |
| DXE39_RS01350 () | 243435..243872 | - | 438 | WP_000406615.1 | Na+/H+ antiporter Mnh2 subunit G | - |
| DXE39_RS01355 () | 243847..244149 | - | 303 | WP_000616643.1 | Na+/H+ antiporter Mnh2 subunit F | - |
| DXE39_RS01360 () | 244146..244628 | - | 483 | WP_001071971.1 | Na+/H+ antiporter Mnh2 subunit E | - |
| DXE39_RS01365 () | 244629..246125 | - | 1497 | WP_000950554.1 | Na+/H+ antiporter Mnh2 subunit D | - |
| DXE39_RS01370 () | 246115..246459 | - | 345 | WP_001048982.1 | Na+/H+ antiporter Mnh2 subunit C | - |
| DXE39_RS01375 () | 246456..246881 | - | 426 | WP_000661909.1 | Na+/H+ antiporter Mnh2 subunit B | - |
| DXE39_RS01380 () | 246868..249270 | - | 2403 | WP_000060757.1 | Na+/H+ antiporter Mnh2 subunit A | - |
| DXE39_RS01385 () | 249289..249849 | - | 561 | WP_001044969.1 | Tyrosine recombinase XerD | VF |
| DXE39_RS01390 () | 250004..250207 | + | 204 | WP_000047744.1 | hypothetical protein | - |
| DXE39_RS01395 () | 250224..250448 | + | 225 | WP_000169038.1 | DUF2922 domain-containing protein | - |
| DXE39_RS01400 () | 250641..251570 | + | 930 | WP_021285860.1 | DMT family transporter | - |
| DXE39_RS01405 () | 252518..252892 | + | 375 | WP_001018677.1 | global transcriptional regulator SarA | - |
| DXE39_RS01410 () | 253144..253932 | - | 789 | WP_001045424.1 | alpha/beta hydrolase | - |
| DXE39_RS01415 () | 254101..254817 | - | 717 | WP_001222139.1 | hypothetical protein | - |
| DXE39_RS01420 () | 254979..255485 | - | 507 | WP_000735556.1 | hypothetical protein | - |
| DXE39_RS01425 () | 255621..256421 | - | 801 | WP_000362963.1 | alpha/beta hydrolase | - |
| DXE39_RS01430 () | 256405..257124 | - | 720 | WP_000365352.1 | HAD family hydrolase | - |
| DXE39_RS01435 () | 257179..258129 | - | 951 | WP_010922824.1 | iron ABC transporter permease | - |
| DXE39_RS01440 () | 258280..259167 | - | 888 | WP_000749060.1 | ABC transporter substrate-binding protein | - |
| DXE39_RS01445 () | 259497..260132 | - | 636 | WP_000901759.1 | endonuclease III domain-containing protein | - |
| DXE39_RS01450 () | 260617..262278 | - | 1662 | WP_001021133.1 | arginine--tRNA ligase | - |
| DXE39_RS01455 () | 262275..262691 | - | 417 | WP_000359090.1 | DUF1934 domain-containing protein | - |
| DXE39_RS01460 () | 262784..262892 | - | 109 | Protein_282 | hypothetical protein | - |
| DXE39_RS01465 () | 262967..263977 | - | 1011 | WP_001200750.1 | alcohol dehydrogenase AdhP | - |
| DXE39_RS01470 () | 264476..264997 | - | 522 | WP_016187113.1 | YwhD family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|