MGE detailed information
MGE type: Prophage MGE length: 42765 bp
Accession: NZ_LT992436 Location: 2557943..2600707 Organism: Staphylococcus aureus isolate 1549-REV Replicon: chromosome
Accession: NZ_LT992436 Location: 2557943..2600707 Organism: Staphylococcus aureus isolate 1549-REV Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| DYY98_RS13055 () | 2553386..2553619 | + | 234 | WP_000556760.1 | preprotein translocase subunit SecG | - |
| DYY98_RS13060 () | 2553748..2554488 | + | 741 | WP_001165966.1 | carboxylesterase | - |
| DYY98_RS13065 () | 2554522..2556894 | + | 2373 | WP_115657119.1 | ribonuclease R | - |
| DYY98_RS13070 () | 2556916..2557380 | + | 465 | WP_001085185.1 | SsrA-binding protein SmpB | - |
| DYY98_RS13080 () | 2557943..2559049 | - | 1107 | WP_000149511.1 | Putative prophage phiRv2 integrase ; Integrase | Integrase |
| DYY98_RS13085 () | 2559039..2559842 | - | 804 | WP_000358990.1 | helix-turn-helix domain-containing protein | - |
| DYY98_RS13090 () | 2559978..2560181 | + | 204 | WP_001045296.1 | transcriptional regulator | - |
| DYY98_RS13095 () | 2560217..2560435 | + | 219 | WP_000163544.1 | helix-turn-helix domain-containing protein | - |
| DYY98_RS13100 () | 2560447..2560593 | + | 147 | WP_000784885.1 | hypothetical protein | - |
| DYY98_RS13105 () | 2560586..2560795 | + | 210 | WP_001058494.1 | hypothetical protein | Antitoxin Detail |
| DYY98_RS13110 () | 2560798..2561115 | + | 318 | WP_001103939.1 | DUF1474 family protein | Toxin Detail |
| DYY98_RS13115 () | 2561179..2562048 | + | 870 | WP_001002717.1 | primase alpha helix C-terminal domain-containing protein | - |
| DYY98_RS13120 () | 2562065..2562589 | + | 525 | WP_111125118.1 | hypothetical protein | - |
| DYY98_RS13125 () | 2562601..2563730 | + | 1130 | WP_115657120.1 | IS3 family transposase IS655 | Transposase |
| DYY98_RS13130 () | 2563747..2564748 | + | 1002 | Protein_2439 | virulence-associated protein E | - |
| DYY98_RS13135 () | 2565049..2565411 | + | 363 | WP_001039170.1 | hypothetical protein | - |
| DYY98_RS13140 () | 2565413..2565697 | + | 285 | WP_000998185.1 | hypothetical protein | - |
| DYY98_RS13145 () | 2565694..2566335 | + | 642 | WP_001019808.1 | hypothetical protein | - |
| DYY98_RS13150 () | 2567044..2567388 | + | 345 | WP_001288441.1 | hypothetical protein | - |
| DYY98_RS13155 () | 2567423..2568001 | + | 579 | WP_000856046.1 | hypothetical protein | - |
| DYY98_RS14060 () | 2568001..2568177 | + | 177 | WP_001160678.1 | hypothetical protein | - |
| DYY98_RS13160 () | 2568230..2568757 | + | 528 | WP_000777464.1 | spore coat protein | - |
| DYY98_RS13165 () | 2568889..2569101 | + | 213 | WP_045181470.1 | hypothetical protein | - |
| DYY98_RS13170 () | 2569098..2569668 | + | 571 | Protein_2448 | terminase small subunit | - |
| DYY98_RS13175 () | 2569772..2570812 | + | 1041 | WP_000360021.1 | hypothetical protein | - |
| DYY98_RS13180 () | 2570925..2571113 | + | 189 | WP_001805416.1 | hypothetical protein | - |
| DYY98_RS13185 () | 2571106..2571774 | + | 669 | WP_001001286.1 | restriction endonuclease | - |
| DYY98_RS13190 () | 2571995..2572549 | - | 555 | WP_001035612.1 | DUF4888 domain-containing protein | - |
| DYY98_RS13195 () | 2573333..2574133 | + | 801 | WP_001043552.1 | Enterotoxin type C-2 | VF |
| DYY98_RS13200 () | 2574300..2575022 | - | 723 | WP_000746602.1 | Enterotoxin type A | VF |
| DYY98_RS13205 () | 2575863..2576477 | + | 615 | WP_000999093.1 | stage II sporulation protein M | - |
| DYY98_RS13210 () | 2576762..2577490 | - | 729 | WP_001806213.1 | DUF5067 domain-containing protein | - |
| DYY98_RS13215 () | 2577926..2578081 | + | 156 | WP_072468882.1 | hypothetical protein | - |
| DYY98_RS13220 () | 2578089..2578610 | + | 522 | WP_000608189.1 | hypothetical protein | - |
| DYY98_RS13225 () | 2578749..2579279 | + | 531 | WP_001167163.1 | N-acetyltransferase | - |
| DYY98_RS13230 () | 2579543..2582464 | + | 2922 | WP_001056333.1 | MSCRAMM family adhesin clumping factor ClfA | - |
| DYY98_RS13235 () | 2582685..2584214 | + | 1530 | WP_000791723.1 | hypothetical protein | VF |
| DYY98_RS13240 () | 2584565..2585590 | + | 1026 | WP_000727726.1 | extracellular matrix protein-binding adhesin Emp | - |
| DYY98_RS13245 () | 2585926..2586447 | + | 522 | WP_000824479.1 | hypothetical protein | VF |
| DYY98_RS13250 () | 2586788..2587474 | + | 687 | WP_001622483.1 | thermonuclease family protein | - |
| DYY98_RS13255 () | 2587831..2588031 | + | 201 | WP_001059082.1 | cold-shock protein | - |
| DYY98_RS13260 () | 2588528..2588746 | - | 219 | WP_000005884.1 | hypothetical protein | - |
| DYY98_RS13265 () | 2588819..2589091 | - | 273 | WP_001004400.1 | hypothetical protein | - |
| DYY98_RS13270 () | 2589179..2589748 | - | 570 | WP_001106662.1 | hypothetical protein | - |
| DYY98_RS13275 () | 2589936..2590124 | - | 189 | WP_000052076.1 | hypothetical protein | Toxin Detail |
| DYY98_RS13280 () | 2590153..2590413 | - | 261 | WP_001059690.1 | hypothetical protein | Antitoxin Detail |
| DYY98_RS13285 () | 2590754..2590957 | + | 204 | WP_000145160.1 | sterile alpha motif-like domain-containing protein | - |
| DYY98_RS13290 () | 2590954..2591190 | - | 237 | WP_000368687.1 | hypothetical protein | - |
| DYY98_RS13295 () | 2591414..2591995 | + | 582 | WP_001140696.1 | phosphoglycerate mutase family protein | - |
| DYY98_RS13300 () | 2592068..2592685 | - | 618 | WP_000255550.1 | LysE/ArgO family amino acid transporter | - |
| DYY98_RS13305 () | 2592841..2593335 | - | 495 | WP_000569884.1 | GNAT family N-acetyltransferase | - |
| DYY98_RS13310 () | 2593734..2594156 | - | 423 | WP_000974451.1 | organic hydroperoxide resistance protein | - |
| DYY98_RS13315 () | 2594304..2595020 | + | 717 | WP_000150033.1 | type I 3-dehydroquinate dehydratase | - |
| DYY98_RS13320 () | 2595103..2595642 | + | 540 | WP_000422908.1 | nitroreductase | - |
| DYY98_RS13325 () | 2595792..2596112 | - | 321 | WP_001147956.1 | thioredoxin family protein | - |
| DYY98_RS13330 () | 2596256..2596612 | + | 357 | WP_000589550.1 | arsenate reductase family protein | - |
| DYY98_RS13335 () | 2596770..2597150 | + | 381 | WP_000290492.1 | glycine cleavage system protein GcvH | - |
| DYY98_RS13345 () | 2597328..2598206 | + | 879 | WP_001796505.1 | DUF1963 domain-containing protein | - |
| DYY98_RS13355 () | 2598757..2599143 | + | 387 | WP_001018963.1 | toprim domain-containing protein | - |
| DYY98_RS13360 () | 2599136..2599432 | + | 297 | WP_001065802.1 | thioredoxin family protein | - |
| DYY98_RS13365 () | 2599682..2600707 | + | 1026 | WP_000571205.1 | Methionine import ATP-binding protein MetN 2 | VF |
| DYY98_RS13370 () | 2600700..2601395 | + | 696 | WP_076686132.1 | ABC transporter permease | - |
| DYY98_RS13375 () | 2601413..2602234 | + | 822 | WP_000732319.1 | MetQ/NlpA family ABC transporter substrate-binding protein | - |
| DYY98_RS13380 () | 2602585..2602779 | + | 195 | WP_000752917.1 | CsbD family protein | - |
| DYY98_RS13385 () | 2603013..2603864 | - | 852 | WP_001183845.1 | DUF368 domain-containing protein | - |
| DYY98_RS13390 () | 2604192..2604953 | + | 762 | WP_000168845.1 | Fe-S cluster assembly ATPase SufC | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|