MGE detailed information
MGE type: Prophage MGE length: 42765 bp
Accession: NZ_LT992435 Location: 2557942..2600706 Organism: Staphylococcus aureus isolate 1549-SCV Replicon: chromosome
Accession: NZ_LT992435 Location: 2557942..2600706 Organism: Staphylococcus aureus isolate 1549-SCV Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| DYY96_RS13055 () | 2553385..2553618 | + | 234 | WP_000556760.1 | preprotein translocase subunit SecG | - |
| DYY96_RS13060 () | 2553747..2554487 | + | 741 | WP_001165966.1 | carboxylesterase | - |
| DYY96_RS13065 () | 2554521..2556893 | + | 2373 | WP_115657119.1 | ribonuclease R | - |
| DYY96_RS13070 () | 2556915..2557379 | + | 465 | WP_001085185.1 | SsrA-binding protein SmpB | - |
| DYY96_RS13080 () | 2557942..2559048 | - | 1107 | WP_000149511.1 | Putative prophage phiRv2 integrase ; Integrase | Integrase |
| DYY96_RS13085 () | 2559038..2559841 | - | 804 | WP_000358990.1 | helix-turn-helix domain-containing protein | - |
| DYY96_RS13090 () | 2559977..2560180 | + | 204 | WP_001045296.1 | transcriptional regulator | - |
| DYY96_RS13095 () | 2560216..2560434 | + | 219 | WP_000163544.1 | helix-turn-helix domain-containing protein | - |
| DYY96_RS13100 () | 2560446..2560592 | + | 147 | WP_000784885.1 | hypothetical protein | - |
| DYY96_RS13105 () | 2560585..2560794 | + | 210 | WP_001058494.1 | hypothetical protein | Antitoxin Detail |
| DYY96_RS13110 () | 2560797..2561114 | + | 318 | WP_001103939.1 | DUF1474 family protein | Toxin Detail |
| DYY96_RS13115 () | 2561178..2562047 | + | 870 | WP_001002717.1 | primase alpha helix C-terminal domain-containing protein | - |
| DYY96_RS13120 () | 2562064..2562588 | + | 525 | WP_111125118.1 | hypothetical protein | - |
| DYY96_RS13125 () | 2562600..2563729 | + | 1130 | WP_115657120.1 | IS3 family transposase IS655 | Transposase |
| DYY96_RS13130 () | 2563746..2564747 | + | 1002 | Protein_2440 | virulence-associated protein E | - |
| DYY96_RS13135 () | 2565048..2565410 | + | 363 | WP_001039170.1 | hypothetical protein | - |
| DYY96_RS13140 () | 2565412..2565696 | + | 285 | WP_000998185.1 | hypothetical protein | - |
| DYY96_RS13145 () | 2565693..2566334 | + | 642 | WP_001019808.1 | hypothetical protein | - |
| DYY96_RS13150 () | 2567043..2567387 | + | 345 | WP_001288441.1 | hypothetical protein | - |
| DYY96_RS13155 () | 2567422..2568000 | + | 579 | WP_000856046.1 | hypothetical protein | - |
| DYY96_RS14065 () | 2568000..2568176 | + | 177 | WP_001160678.1 | hypothetical protein | - |
| DYY96_RS13160 () | 2568229..2568756 | + | 528 | WP_000777464.1 | spore coat protein | - |
| DYY96_RS13165 () | 2568888..2569100 | + | 213 | WP_045181470.1 | hypothetical protein | - |
| DYY96_RS13170 () | 2569097..2569667 | + | 571 | Protein_2449 | terminase small subunit | - |
| DYY96_RS13175 () | 2569771..2570811 | + | 1041 | WP_000360021.1 | hypothetical protein | - |
| DYY96_RS13180 () | 2570924..2571112 | + | 189 | WP_001805416.1 | hypothetical protein | - |
| DYY96_RS13185 () | 2571105..2571773 | + | 669 | WP_001001286.1 | restriction endonuclease | - |
| DYY96_RS13190 () | 2571994..2572548 | - | 555 | WP_001035612.1 | DUF4888 domain-containing protein | - |
| DYY96_RS13195 () | 2573332..2574132 | + | 801 | WP_001043552.1 | Enterotoxin type C-2 | VF |
| DYY96_RS13200 () | 2574299..2575021 | - | 723 | WP_000746602.1 | Enterotoxin type A | VF |
| DYY96_RS13205 () | 2575862..2576476 | + | 615 | WP_000999093.1 | stage II sporulation protein M | - |
| DYY96_RS13210 () | 2576761..2577489 | - | 729 | WP_001806213.1 | DUF5067 domain-containing protein | - |
| DYY96_RS13215 () | 2577925..2578080 | + | 156 | WP_072468882.1 | hypothetical protein | - |
| DYY96_RS13220 () | 2578088..2578609 | + | 522 | WP_000608189.1 | hypothetical protein | - |
| DYY96_RS13225 () | 2578748..2579278 | + | 531 | WP_001167163.1 | N-acetyltransferase | - |
| DYY96_RS13230 () | 2579542..2582463 | + | 2922 | WP_001056333.1 | MSCRAMM family adhesin clumping factor ClfA | - |
| DYY96_RS13235 () | 2582684..2584213 | + | 1530 | WP_000791723.1 | hypothetical protein | VF |
| DYY96_RS13240 () | 2584564..2585589 | + | 1026 | WP_000727726.1 | extracellular matrix protein-binding adhesin Emp | - |
| DYY96_RS13245 () | 2585925..2586446 | + | 522 | WP_000824479.1 | hypothetical protein | VF |
| DYY96_RS13250 () | 2586787..2587473 | + | 687 | WP_001622483.1 | thermonuclease family protein | - |
| DYY96_RS13255 () | 2587830..2588030 | + | 201 | WP_001059082.1 | cold-shock protein | - |
| DYY96_RS13260 () | 2588527..2588745 | - | 219 | WP_000005884.1 | hypothetical protein | - |
| DYY96_RS13265 () | 2588818..2589090 | - | 273 | WP_001004400.1 | hypothetical protein | - |
| DYY96_RS13270 () | 2589178..2589747 | - | 570 | WP_001106662.1 | hypothetical protein | - |
| DYY96_RS13275 () | 2589935..2590123 | - | 189 | WP_000052076.1 | hypothetical protein | Toxin Detail |
| DYY96_RS13280 () | 2590152..2590412 | - | 261 | WP_001059690.1 | hypothetical protein | Antitoxin Detail |
| DYY96_RS13285 () | 2590753..2590956 | + | 204 | WP_000145160.1 | sterile alpha motif-like domain-containing protein | - |
| DYY96_RS13290 () | 2590953..2591189 | - | 237 | WP_000368687.1 | hypothetical protein | - |
| DYY96_RS13295 () | 2591413..2591994 | + | 582 | WP_001140696.1 | phosphoglycerate mutase family protein | - |
| DYY96_RS13300 () | 2592067..2592684 | - | 618 | WP_000255550.1 | LysE/ArgO family amino acid transporter | - |
| DYY96_RS13305 () | 2592840..2593334 | - | 495 | WP_000569884.1 | GNAT family N-acetyltransferase | - |
| DYY96_RS13310 () | 2593733..2594155 | - | 423 | WP_000974451.1 | organic hydroperoxide resistance protein | - |
| DYY96_RS13315 () | 2594303..2595019 | + | 717 | WP_000150033.1 | type I 3-dehydroquinate dehydratase | - |
| DYY96_RS13320 () | 2595102..2595641 | + | 540 | WP_000422908.1 | nitroreductase | - |
| DYY96_RS13325 () | 2595791..2596111 | - | 321 | WP_001147956.1 | thioredoxin family protein | - |
| DYY96_RS13330 () | 2596255..2596611 | + | 357 | WP_000589550.1 | arsenate reductase family protein | - |
| DYY96_RS13335 () | 2596769..2597149 | + | 381 | WP_000290492.1 | glycine cleavage system protein GcvH | - |
| DYY96_RS13345 () | 2597327..2598205 | + | 879 | WP_001796505.1 | DUF1963 domain-containing protein | - |
| DYY96_RS13355 () | 2598756..2599142 | + | 387 | WP_001018963.1 | toprim domain-containing protein | - |
| DYY96_RS13360 () | 2599135..2599431 | + | 297 | WP_001065802.1 | thioredoxin family protein | - |
| DYY96_RS13365 () | 2599681..2600706 | + | 1026 | WP_000571205.1 | Methionine import ATP-binding protein MetN 2 | VF |
| DYY96_RS13370 () | 2600699..2601394 | + | 696 | WP_076686132.1 | ABC transporter permease | - |
| DYY96_RS13375 () | 2601412..2602233 | + | 822 | WP_000732319.1 | MetQ/NlpA family ABC transporter substrate-binding protein | - |
| DYY96_RS13380 () | 2602584..2602778 | + | 195 | WP_000752917.1 | CsbD family protein | - |
| DYY96_RS13385 () | 2603012..2603863 | - | 852 | WP_001183845.1 | DUF368 domain-containing protein | - |
| DYY96_RS13390 () | 2604191..2604952 | + | 762 | WP_000168845.1 | Fe-S cluster assembly ATPase SufC | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|