MGE detailed information
MGE type: Prophage MGE length: 42765 bp
Accession: NZ_LT992434 Location: 2557916..2600680 Organism: Staphylococcus aureus isolate 1549-WT Replicon: chromosome
Accession: NZ_LT992434 Location: 2557916..2600680 Organism: Staphylococcus aureus isolate 1549-WT Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| DYY92_RS13060 () | 2553359..2553592 | + | 234 | WP_000556760.1 | preprotein translocase subunit SecG | - |
| DYY92_RS13065 () | 2553721..2554461 | + | 741 | WP_001165966.1 | carboxylesterase | - |
| DYY92_RS13070 () | 2554495..2556867 | + | 2373 | WP_115657119.1 | ribonuclease R | - |
| DYY92_RS13075 () | 2556889..2557353 | + | 465 | WP_001085185.1 | SsrA-binding protein SmpB | - |
| DYY92_RS13085 () | 2557916..2559022 | - | 1107 | WP_000149511.1 | Putative prophage phiRv2 integrase ; Integrase | Integrase |
| DYY92_RS13090 () | 2559012..2559815 | - | 804 | WP_000358990.1 | helix-turn-helix domain-containing protein | - |
| DYY92_RS13095 () | 2559951..2560154 | + | 204 | WP_001045296.1 | transcriptional regulator | - |
| DYY92_RS13100 () | 2560190..2560408 | + | 219 | WP_000163544.1 | helix-turn-helix domain-containing protein | - |
| DYY92_RS13105 () | 2560420..2560566 | + | 147 | WP_000784885.1 | hypothetical protein | - |
| DYY92_RS13110 () | 2560559..2560768 | + | 210 | WP_001058494.1 | hypothetical protein | Antitoxin Detail |
| DYY92_RS13115 () | 2560771..2561088 | + | 318 | WP_001103939.1 | DUF1474 family protein | Toxin Detail |
| DYY92_RS13120 () | 2561152..2562021 | + | 870 | WP_001002717.1 | primase alpha helix C-terminal domain-containing protein | - |
| DYY92_RS13125 () | 2562038..2562562 | + | 525 | WP_111125118.1 | hypothetical protein | - |
| DYY92_RS13130 () | 2562574..2563703 | + | 1130 | WP_115657120.1 | IS3 family transposase IS655 | Transposase |
| DYY92_RS13135 () | 2563720..2564721 | + | 1002 | Protein_2439 | virulence-associated protein E | - |
| DYY92_RS13140 () | 2565022..2565384 | + | 363 | WP_001039170.1 | hypothetical protein | - |
| DYY92_RS13145 () | 2565386..2565670 | + | 285 | WP_000998185.1 | hypothetical protein | - |
| DYY92_RS13150 () | 2565667..2566308 | + | 642 | WP_001019808.1 | hypothetical protein | - |
| DYY92_RS13155 () | 2567017..2567361 | + | 345 | WP_001288441.1 | hypothetical protein | - |
| DYY92_RS13160 () | 2567396..2567974 | + | 579 | WP_000856046.1 | hypothetical protein | - |
| DYY92_RS14070 () | 2567974..2568150 | + | 177 | WP_001160678.1 | hypothetical protein | - |
| DYY92_RS13165 () | 2568203..2568730 | + | 528 | WP_000777464.1 | spore coat protein | - |
| DYY92_RS13170 () | 2568862..2569074 | + | 213 | WP_045181470.1 | hypothetical protein | - |
| DYY92_RS13175 () | 2569071..2569641 | + | 571 | Protein_2448 | terminase small subunit | - |
| DYY92_RS13180 () | 2569745..2570785 | + | 1041 | WP_000360021.1 | hypothetical protein | - |
| DYY92_RS13185 () | 2570898..2571086 | + | 189 | WP_001805416.1 | hypothetical protein | - |
| DYY92_RS13190 () | 2571079..2571747 | + | 669 | WP_001001286.1 | restriction endonuclease | - |
| DYY92_RS13195 () | 2571968..2572522 | - | 555 | WP_001035612.1 | DUF4888 domain-containing protein | - |
| DYY92_RS13200 () | 2573306..2574106 | + | 801 | WP_001043552.1 | Enterotoxin type C-2 | VF |
| DYY92_RS13205 () | 2574273..2574995 | - | 723 | WP_000746602.1 | Enterotoxin type A | VF |
| DYY92_RS13210 () | 2575836..2576450 | + | 615 | WP_000999093.1 | stage II sporulation protein M | - |
| DYY92_RS13215 () | 2576735..2577463 | - | 729 | WP_001806213.1 | DUF5067 domain-containing protein | - |
| DYY92_RS13220 () | 2577899..2578054 | + | 156 | WP_072468882.1 | hypothetical protein | - |
| DYY92_RS13225 () | 2578062..2578583 | + | 522 | WP_000608189.1 | hypothetical protein | - |
| DYY92_RS13230 () | 2578722..2579252 | + | 531 | WP_001167163.1 | N-acetyltransferase | - |
| DYY92_RS13235 () | 2579516..2582437 | + | 2922 | WP_001056333.1 | MSCRAMM family adhesin clumping factor ClfA | - |
| DYY92_RS13240 () | 2582658..2584187 | + | 1530 | WP_000791723.1 | hypothetical protein | VF |
| DYY92_RS13245 () | 2584538..2585563 | + | 1026 | WP_000727726.1 | extracellular matrix protein-binding adhesin Emp | - |
| DYY92_RS13250 () | 2585899..2586420 | + | 522 | WP_000824479.1 | hypothetical protein | VF |
| DYY92_RS13255 () | 2586761..2587447 | + | 687 | WP_001622483.1 | thermonuclease family protein | - |
| DYY92_RS13260 () | 2587804..2588004 | + | 201 | WP_001059082.1 | cold-shock protein | - |
| DYY92_RS13265 () | 2588501..2588719 | - | 219 | WP_000005884.1 | hypothetical protein | - |
| DYY92_RS13270 () | 2588792..2589064 | - | 273 | WP_001004400.1 | hypothetical protein | - |
| DYY92_RS13275 () | 2589152..2589721 | - | 570 | WP_001106662.1 | hypothetical protein | - |
| DYY92_RS13280 () | 2589909..2590097 | - | 189 | WP_000052076.1 | hypothetical protein | Toxin Detail |
| DYY92_RS13285 () | 2590126..2590386 | - | 261 | WP_001059690.1 | hypothetical protein | Antitoxin Detail |
| DYY92_RS13290 () | 2590727..2590930 | + | 204 | WP_000145160.1 | sterile alpha motif-like domain-containing protein | - |
| DYY92_RS13295 () | 2590927..2591163 | - | 237 | WP_000368687.1 | hypothetical protein | - |
| DYY92_RS13300 () | 2591387..2591968 | + | 582 | WP_001140696.1 | phosphoglycerate mutase family protein | - |
| DYY92_RS13305 () | 2592041..2592658 | - | 618 | WP_000255550.1 | LysE/ArgO family amino acid transporter | - |
| DYY92_RS13310 () | 2592814..2593308 | - | 495 | WP_000569884.1 | GNAT family N-acetyltransferase | - |
| DYY92_RS13315 () | 2593707..2594129 | - | 423 | WP_000974451.1 | organic hydroperoxide resistance protein | - |
| DYY92_RS13320 () | 2594277..2594993 | + | 717 | WP_000150033.1 | type I 3-dehydroquinate dehydratase | - |
| DYY92_RS13325 () | 2595076..2595615 | + | 540 | WP_000422908.1 | nitroreductase | - |
| DYY92_RS13330 () | 2595765..2596085 | - | 321 | WP_001147956.1 | thioredoxin family protein | - |
| DYY92_RS13335 () | 2596229..2596585 | + | 357 | WP_000589550.1 | arsenate reductase family protein | - |
| DYY92_RS13340 () | 2596743..2597123 | + | 381 | WP_000290492.1 | glycine cleavage system protein GcvH | - |
| DYY92_RS13350 () | 2597301..2598179 | + | 879 | WP_001796505.1 | DUF1963 domain-containing protein | - |
| DYY92_RS13360 () | 2598730..2599116 | + | 387 | WP_001018963.1 | toprim domain-containing protein | - |
| DYY92_RS13365 () | 2599109..2599405 | + | 297 | WP_001065802.1 | thioredoxin family protein | - |
| DYY92_RS13370 () | 2599655..2600680 | + | 1026 | WP_000571205.1 | Methionine import ATP-binding protein MetN 2 | VF |
| DYY92_RS13375 () | 2600673..2601368 | + | 696 | WP_076686132.1 | ABC transporter permease | - |
| DYY92_RS13380 () | 2601386..2602207 | + | 822 | WP_000732319.1 | MetQ/NlpA family ABC transporter substrate-binding protein | - |
| DYY92_RS13385 () | 2602558..2602752 | + | 195 | WP_000752917.1 | CsbD family protein | - |
| DYY92_RS13390 () | 2602986..2603837 | - | 852 | WP_001183845.1 | DUF368 domain-containing protein | - |
| DYY92_RS13395 () | 2604165..2604926 | + | 762 | WP_000168845.1 | Fe-S cluster assembly ATPase SufC | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|