MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 151612 bp
Accession: NZ_LT969521 Location: 1..151612 Organism: Pseudomonas aeruginosa isolate RW109 Replicon: plasmid RW109 plasmid 2
Accession: NZ_LT969521 Location: 1..151612 Organism: Pseudomonas aeruginosa isolate RW109 Replicon: plasmid RW109 plasmid 2
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| RW109_RS38780 () | 24..1166 | - | 1143 | WP_023100569.1 | hypothetical protein | - |
| RW109_RS37280 () | 1163..1573 | - | 411 | WP_031634010.1 | hypothetical protein | VF |
| RW109_RS37285 () | 1588..2055 | - | 468 | WP_023100571.1 | hypothetical protein | - |
| RW109_RS37290 () | 2048..3220 | - | 1173 | WP_023100572.1 | hypothetical protein | - |
| RW109_RS37295 () | 3220..3645 | - | 426 | WP_023100573.1 | hypothetical protein | - |
| RW109_RS37300 () | 3728..3979 | - | 252 | WP_031634011.1 | hypothetical protein | - |
| RW109_RS37305 () | 4008..5585 | - | 1578 | WP_031634012.1 | type IA DNA topoisomerase | - |
| RW109_RS37310 () | 5586..5843 | - | 258 | WP_031634014.1 | hypothetical protein | - |
| RW109_RS37315 () | 5845..6936 | - | 1092 | WP_044286278.1 | hypothetical protein | - |
| RW109_RS37320 () | 6976..8358 | - | 1383 | WP_031634016.1 | hypothetical protein | - |
| RW109_RS37325 () | 8526..8957 | + | 432 | WP_023100577.1 | hypothetical protein | VF |
| RW109_RS37330 () | 9241..9774 | + | 534 | WP_023100578.1 | hypothetical protein | - |
| RW109_RS37335 () | 9779..10162 | + | 384 | WP_023100579.1 | hypothetical protein | - |
| RW109_RS37340 () | 10209..10640 | + | 432 | WP_023100580.1 | hypothetical protein | - |
| RW109_RS37345 () | 10701..11219 | - | 519 | WP_023100581.1 | hypothetical protein | - |
| RW109_RS37350 () | 11200..11808 | - | 609 | WP_023100582.1 | hypothetical protein | - |
| RW109_RS37355 () | 11928..14102 | - | 2175 | WP_023100583.1 | CRISPR type aferr-associated dead/deah-box helicase csf4 | - |
| RW109_RS37360 () | 14191..14916 | + | 726 | WP_023100584.1 | hypothetical protein | - |
| RW109_RS37365 () | 14909..15700 | + | 792 | WP_023100585.1 | CRISPR type aferr-associated protein csf1 | - |
| RW109_RS37370 () | 15700..16743 | + | 1044 | WP_023100586.1 | type IV CRISPR-associated protein Csf2 | - |
| RW109_RS37375 () | 16765..17400 | + | 636 | WP_031634023.1 | hypothetical protein | - |
| RW109_RS37380 () | 17669..18181 | - | 513 | WP_023100588.1 | hypothetical protein | - |
| RW109_RS37385 () | 18273..18554 | - | 282 | WP_023100589.1 | hypothetical protein | - |
| RW109_RS37390 () | 18554..19588 | - | 1035 | WP_074197753.1 | hypothetical protein | - |
| RW109_RS37395 () | 19645..20775 | - | 1131 | WP_031634027.1 | hypothetical protein | - |
| RW109_RS37400 () | 20791..21282 | - | 492 | WP_023111169.1 | hypothetical protein | - |
| RW109_RS37405 () | 21275..21772 | - | 498 | WP_023100593.1 | hypothetical protein | - |
| RW109_RS37410 () | 22088..24349 | + | 2262 | WP_023100594.1 | DotA/TraY family protein | - |
| RW109_RS37415 () | 24459..24797 | - | 339 | WP_023100595.1 | hypothetical protein | - |
| RW109_RS37420 () | 24950..25189 | + | 240 | WP_057384284.1 | helix-turn-helix domain-containing protein | - |
| RW109_RS37425 () | 25325..26305 | - | 981 | WP_057380777.1 | IS5 family transposase ISPre1 | Transposase |
| RW109_RS37430 () | 26461..28347 | - | 1887 | WP_023111168.1 | hypothetical protein | VF |
| RW109_RS37435 () | 28534..28953 | - | 420 | WP_078451034.1 | hypothetical protein | - |
| RW109_RS37440 () | 29112..29315 | + | 204 | Protein_34 | Tn3 family transposase TnpA_ISPa42 | Transposase |
| RW109_RS37445 () | 29529..30617 | - | 1089 | Protein_35 | hypothetical protein | VF |
| RW109_RS37450 () | 30614..31591 | - | 978 | WP_023100599.1 | Twitching mobility protein | VF |
| RW109_RS37455 () | 31619..32221 | - | 603 | WP_078451035.1 | hypothetical protein | VF |
| RW109_RS37460 () | 32218..33300 | - | 1083 | WP_023100601.1 | Toxin coregulated pilus biosynthesis protein E | VF |
| RW109_RS37465 () | 33302..34864 | - | 1563 | WP_023100602.1 | hypothetical protein | VF |
| RW109_RS37470 () | 34884..35405 | - | 522 | WP_023100603.1 | type IV pilus biogenesis protein PilP | - |
| RW109_RS37475 () | 35392..36732 | - | 1341 | WP_023100604.1 | type 4b pilus protein PilO2 | - |
| RW109_RS37480 () | 36735..38426 | - | 1692 | WP_023100605.1 | hypothetical protein | VF |
| RW109_RS37485 () | 38429..39256 | - | 828 | WP_074197740.1 | hypothetical protein | VF |
| RW109_RS37490 () | 39284..39730 | - | 447 | WP_071534987.1 | hypothetical protein | - |
| RW109_RS37495 () | 39734..40789 | - | 1056 | WP_171947060.1 | ParM/StbA family protein | - |
| RW109_RS38785 () | 40881..41150 | - | 270 | WP_023100608.1 | hypothetical protein | VF |
| RW109_RS37505 () | 41143..42348 | - | 1206 | WP_023100609.1 | hypothetical protein | VF |
| RW109_RS37510 () | 42345..43154 | - | 810 | WP_023100610.1 | hypothetical protein | VF |
| RW109_RS37515 () | 43141..43629 | - | 489 | WP_023100611.1 | hypothetical protein | VF |
| RW109_RS37520 () | 44155..45126 | + | 972 | WP_023100612.1 | site-specific integrase | - |
| RW109_RS37525 () | 45188..45550 | - | 363 | WP_023100613.1 | DNA binding protein | - |
| RW109_RS37530 () | 45662..46423 | - | 762 | WP_023100614.1 | hypothetical protein | - |
| RW109_RS37535 () | 46443..46748 | - | 306 | WP_023100615.1 | hypothetical protein | - |
| RW109_RS38315 () | 46835..47029 | - | 195 | WP_023100616.1 | hypothetical protein | - |
| RW109_RS37550 () | 47686..48213 | - | 528 | WP_023100618.1 | hypothetical protein | - |
| RW109_RS37555 () | 48269..49198 | - | 930 | WP_023100619.1 | hypothetical protein | - |
| RW109_RS37560 () | 49198..49470 | - | 273 | WP_023100620.1 | hypothetical protein | - |
| RW109_RS37565 () | 49732..50856 | + | 1125 | WP_023100621.1 | ParA family protein | - |
| RW109_RS37570 () | 50853..51887 | + | 1035 | WP_023100622.1 | ParB/RepB/Spo0J family partition protein | - |
| RW109_RS37575 () | 52373..53692 | - | 1320 | WP_176742046.1 | replication initiation protein | - |
| RW109_RS37580 () | 55020..55538 | + | 519 | WP_023100624.1 | hypothetical protein | - |
| RW109_RS37585 () | 55672..56322 | + | 651 | WP_023100625.1 | hypothetical protein | VF |
| RW109_RS37590 () | 56322..57248 | + | 927 | WP_044286280.1 | hypothetical protein | VF |
| RW109_RS37595 () | 57251..58483 | + | 1233 | WP_023100627.1 | hypothetical protein | VF |
| RW109_RS37600 () | 58483..59415 | + | 933 | WP_023100628.1 | hypothetical protein | VF |
| RW109_RS37605 () | 59426..59959 | + | 534 | WP_031634041.1 | hypothetical protein | - |
| RW109_RS37610 () | 60046..60369 | + | 324 | WP_031634043.1 | hypothetical protein | - |
| RW109_RS37615 () | 60384..61097 | + | 714 | WP_023100630.1 | hypothetical protein | VF |
| RW109_RS37620 () | 61097..62329 | + | 1233 | WP_023100631.1 | hypothetical protein | - |
| RW109_RS37625 () | 62322..62591 | + | 270 | WP_023100632.1 | hypothetical protein | - |
| RW109_RS37630 () | 62588..65614 | + | 3027 | WP_023100633.1 | hypothetical protein | VF |
| RW109_RS38320 () | 65611..66048 | + | 438 | WP_125728857.1 | hypothetical protein | - |
| RW109_RS37645 () | 66168..66521 | + | 354 | WP_176601040.1 | hypothetical protein | - |
| RW109_RS37650 () | 66627..67232 | + | 606 | WP_023100635.1 | hypothetical protein | - |
| RW109_RS37655 () | 67452..68210 | + | 759 | WP_074197742.1 | hypothetical protein | - |
| RW109_RS37660 () | 68423..69322 | + | 900 | WP_086352096.1 | hypothetical protein | - |
| RW109_RS37665 () | 69401..69640 | + | 240 | WP_049875203.1 | hypothetical protein | - |
| RW109_RS37670 () | 69662..70267 | + | 606 | WP_023100638.1 | hypothetical protein | - |
| RW109_RS37675 () | 70348..70965 | + | 618 | WP_023111167.1 | hypothetical protein | - |
| RW109_RS37680 () | 70994..71524 | + | 531 | WP_023100640.1 | hypothetical protein | - |
| RW109_RS37685 () | 71534..71875 | + | 342 | WP_023100641.1 | hypothetical protein | - |
| RW109_RS37690 () | 71897..72124 | + | 228 | WP_023100642.1 | hypothetical protein | - |
| RW109_RS37695 () | 72159..72635 | + | 477 | WP_023100643.1 | hypothetical protein | - |
| RW109_RS37700 () | 72782..74281 | + | 1500 | WP_174517464.1 | UvrD-helicase domain-containing protein | - |
| RW109_RS37705 () | 74317..75618 | + | 1302 | WP_023100645.1 | hypothetical protein | - |
| RW109_RS37710 () | 75694..80928 | + | 5235 | WP_023100646.1 | strawberry notch C-terminal domain-containing protein | - |
| RW109_RS37715 () | 80938..81282 | + | 345 | WP_023100647.1 | hypothetical protein | - |
| RW109_RS37720 () | 81299..81577 | - | 279 | WP_023100648.1 | hypothetical protein | - |
| RW109_RS37725 () | 81675..83825 | + | 2151 | WP_023100649.1 | topoisomerase DNA-binding C4 zinc finger domain-containing protein | - |
| RW109_RS37730 () | 83835..84518 | + | 684 | WP_023100650.1 | hypothetical protein | - |
| RW109_RS37735 () | 84574..85089 | + | 516 | WP_023100651.1 | hypothetical protein | - |
| RW109_RS37740 () | 85138..85830 | + | 693 | WP_174517462.1 | EAL domain-containing protein | - |
| RW109_RS37745 () | 86476..86802 | + | 327 | WP_023100653.1 | hypothetical protein | - |
| RW109_RS37760 () | 87930..88592 | + | 663 | WP_023100654.1 | site-specific integrase | - |
| RW109_RS37765 () | 88812..89393 | + | 582 | WP_049267518.1 | hypothetical protein | - |
| RW109_RS37770 () | 89413..89637 | + | 225 | WP_023100656.1 | hypothetical protein | - |
| RW109_RS37775 () | 89728..89988 | + | 261 | WP_020308217.1 | hypothetical protein | - |
| RW109_RS38790 () | 90001..90168 | + | 168 | WP_023100657.1 | hypothetical protein | - |
| RW109_RS38795 () | 90186..90341 | + | 156 | WP_023100658.1 | hypothetical protein | - |
| RW109_RS37780 () | 90353..90634 | + | 282 | WP_023100659.1 | hypothetical protein | - |
| RW109_RS37785 () | 90656..91057 | + | 402 | WP_023111166.1 | DUF2591 family protein | - |
| RW109_RS37790 () | 91069..91251 | + | 183 | WP_023100660.1 | hypothetical protein | - |
| RW109_RS37795 () | 91561..92415 | + | 855 | WP_036997997.1 | TnsA endonuclease N-terminal domain-containing protein | - |
| RW109_RS37800 () | 92412..94580 | + | 2169 | WP_003290891.1 | DDE-type integrase/transposase/recombinase | - |
| RW109_RS37805 () | 94655..95635 | + | 981 | WP_019437692.1 | IS5 family transposase ISPpu21 | Transposase |
| RW109_RS37810 () | 95778..97232 | + | 1455 | WP_101476556.1 | AAA family ATPase | - |
| RW109_RS37815 () | 97248..98912 | + | 1665 | WP_023121734.1 | TnsD family Tn7-like transposition protein | - |
| RW109_RS37820 () | 99316..101001 | + | 1686 | WP_034033938.1 | IS21 family transposase IS1474 | Transposase |
| RW109_RS37825 () | 100889..101638 | + | 750 | WP_034033936.1 | IS21 family transposase IS1474 | Transposase |
| RW109_RS37830 () | 101855..103549 | + | 1695 | WP_023121733.1 | TniQ family protein | - |
| RW109_RS37835 () | 103829..105051 | + | 1223 | WP_076611849.1 | IS3 family transposase ISPst4 | Transposase |
| RW109_RS37840 () | 105591..105788 | + | 198 | WP_003149051.1 | hypothetical protein | - |
| RW109_RS37845 () | 105800..106060 | + | 261 | WP_023100661.1 | hypothetical protein | - |
| RW109_RS38800 () | 106073..106243 | + | 171 | WP_023100662.1 | hypothetical protein | - |
| RW109_RS37850 () | 106254..106451 | + | 198 | WP_023100663.1 | hypothetical protein | - |
| RW109_RS37855 () | 106499..106933 | + | 435 | WP_023100664.1 | hypothetical protein | - |
| RW109_RS37860 () | 107196..109175 | + | 1980 | WP_023111165.1 | DEAD/DEAH box helicase | - |
| RW109_RS37865 () | 109189..109902 | + | 714 | WP_023100667.1 | hypothetical protein | - |
| RW109_RS37870 () | 109995..110312 | + | 318 | WP_171947059.1 | hypothetical protein | - |
| RW109_RS37875 () | 110505..110966 | + | 462 | WP_031634057.1 | hypothetical protein | - |
| RW109_RS38805 () | 110959..111135 | + | 177 | WP_153549643.1 | hypothetical protein | - |
| RW109_RS37880 () | 111153..112511 | + | 1359 | WP_023100669.1 | replicative DNA helicase | - |
| RW109_RS37885 () | 112511..113002 | + | 492 | WP_023100670.1 | hypothetical protein | - |
| RW109_RS37890 () | 113234..113977 | + | 744 | WP_023100671.1 | hypothetical protein | - |
| RW109_RS38325 () | 114425..115510 | + | 1086 | WP_020302085.1 | IS66 family transposase ISSal1 | Transposase |
| RW109_RS37900 () | 115571..116857 | - | 1287 | WP_020302086.1 | outer membrane protein transport protein | - |
| RW109_RS37905 () | 116944..117906 | - | 963 | WP_004577240.1 | IS30 family transposase ISPpu17 | Transposase |
| RW109_RS37910 () | 118561..120117 | - | 1557 | WP_019818069.1 | IS66 family transposase ISPpu19 | Transposase |
| RW109_RS37915 () | 120199..120534 | - | 336 | WP_019719038.1 | IS66 family transposase ISPsy43 | Transposase |
| RW109_RS37920 () | 120531..120899 | - | 369 | WP_078451037.1 | IS66 family transposase ISPpu19 | Transposase |
| RW109_RS37925 () | 121212..121475 | + | 264 | WP_020303033.1 | type II toxin-antitoxin system RelB/DinJ family antitoxin | Antitoxin Detail |
| RW109_RS37930 () | 121462..121743 | + | 282 | WP_023100672.1 | type II toxin-antitoxin system YafQ family toxin | Toxin Detail |
| RW109_RS37935 () | 121780..122115 | + | 336 | WP_023100673.1 | hypothetical protein | - |
| RW109_RS37945 () | 122497..122949 | + | 453 | WP_023100674.1 | hypothetical protein | - |
| RW109_RS37950 () | 122998..123720 | - | 723 | WP_031634065.1 | hypothetical protein | - |
| RW109_RS37955 () | 123720..124070 | - | 351 | WP_023100676.1 | type II toxin-antitoxin system PemK/MazF family toxin | Toxin Detail |
| RW109_RS37960 () | 124067..124315 | - | 249 | WP_023100677.1 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | Antitoxin Detail |
| RW109_RS38330 () | 124312..124731 | - | 420 | WP_041167413.1 | hypothetical protein | - |
| RW109_RS37965 () | 124851..125327 | - | 477 | WP_023100690.1 | single-stranded DNA-binding protein | - |
| RW109_RS37970 () | 125338..125775 | - | 438 | WP_023100689.1 | hypothetical protein | - |
| RW109_RS37975 () | 125784..126467 | - | 684 | WP_023100688.1 | hypothetical protein | - |
| RW109_RS37980 () | 126464..127000 | - | 537 | WP_023100687.1 | hypothetical protein | - |
| RW109_RS37985 () | 126997..127227 | - | 231 | WP_023100686.1 | hypothetical protein | - |
| RW109_RS37990 () | 127217..129286 | - | 2070 | WP_023100685.1 | DNA cytosine methyltransferase | - |
| RW109_RS37995 () | 129292..130224 | - | 933 | WP_023100684.1 | recombination-associated protein RdgC | - |
| RW109_RS38000 () | 130233..130517 | - | 285 | WP_023100683.1 | hypothetical protein | - |
| RW109_RS38005 () | 130894..131223 | + | 330 | WP_031634091.1 | hypothetical protein | - |
| RW109_RS38010 () | 131289..131567 | + | 279 | WP_023100682.1 | HU family DNA-binding protein | - |
| RW109_RS38015 () | 131681..132541 | + | 861 | WP_031634090.1 | SprT-like domain-containing protein | - |
| RW109_RS38020 () | 132598..132948 | + | 351 | WP_023100680.1 | hypothetical protein | - |
| RW109_RS38025 () | 132969..133169 | + | 201 | WP_023100679.1 | hypothetical protein | - |
| RW109_RS38030 () | 133236..134885 | + | 1650 | WP_023100530.1 | DNA sulfur modification protein DndB | - |
| RW109_RS38040 () | 135162..141242 | - | 6081 | WP_023111164.1 | hypothetical protein | - |
| RW109_RS38045 () | 141263..141883 | - | 621 | WP_023100558.1 | hypothetical protein | - |
| RW109_RS38050 () | 141947..142888 | - | 942 | WP_023100559.1 | Tyrosine recombinase XerC | VF |
| RW109_RS38810 () | 143011..143175 | + | 165 | WP_023100560.1 | hypothetical protein | - |
| RW109_RS38055 () | 143279..144451 | - | 1173 | WP_023100561.1 | hypothetical protein | - |
| RW109_RS38060 () | 144467..146074 | - | 1608 | WP_023100562.1 | DUF1738 domain-containing protein | - |
| RW109_RS38815 () | 146080..146238 | - | 159 | WP_023100563.1 | hypothetical protein | - |
| RW109_RS38065 () | 146432..146833 | - | 402 | WP_023100564.1 | hypothetical protein | - |
| RW109_RS38070 () | 146916..147710 | - | 795 | WP_031634008.1 | thiol:disulfide interchange protein DsbG | - |
| RW109_RS38075 () | 147698..148318 | - | 621 | WP_023100566.1 | DUF882 domain-containing protein | - |
| RW109_RS38080 () | 148315..150849 | - | 2535 | WP_023100567.1 | hypothetical protein | VF |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|