MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 78348 bp
Accession: NZ_LT963413 Location: 1..78348 Organism: Pseudomonas syringae isolate CFBP3840 Replicon: plasmid PP4
Accession: NZ_LT963413 Location: 1..78348 Organism: Pseudomonas syringae isolate CFBP3840 Replicon: plasmid PP4
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C6H39_RS30485 () | 574..1170 | + | 597 | WP_057425230.1 | Tn3 family transposase TnpR_ISPsy30 | Transposase |
| C6H39_RS30490 () | 1160..4186 | + | 3027 | WP_060404205.1 | Tn3 family transposase TnpA_ISPsy30 | Transposase |
| C6H39_RS30495 () | 4218..4529 | - | 312 | Protein_3 | hypothetical protein | - |
| C6H39_RS30500 () | 4695..5117 | - | 423 | WP_060404204.1 | type II toxin-antitoxin system HicB family antitoxin | Antitoxin Detail |
| C6H39_RS30505 () | 5149..5331 | - | 183 | WP_044310977.1 | type II toxin-antitoxin system HicA family toxin | Toxin Detail |
| C6H39_RS30510 () | 5624..5905 | + | 282 | WP_060402791.1 | hypothetical protein | - |
| C6H39_RS30515 () | 5886..7112 | + | 1227 | WP_104721076.1 | IS91 family transposase IS801 | Transposase |
| C6H39_RS30525 () | 7386..7667 | + | 282 | WP_060407302.1 | hypothetical protein | - |
| C6H39_RS30530 () | 7648..8877 | + | 1230 | WP_104721077.1 | IS91 family transposase IS801 | Transposase |
| C6H39_RS30540 () | 9449..10825 | + | 1377 | WP_065348661.1 | multidrug transporter MatE | - |
| C6H39_RS30545 () | 10908..12095 | + | 1188 | WP_060403067.1 | AMP-binding protein | - |
| C6H39_RS30555 () | 12580..12897 | + | 318 | Protein_12 | Tn3 family transposase TnpA_ISRsp12 | Transposase |
| C6H39_RS30560 () | 13717..14223 | - | 507 | Protein_13 | DNA polymerase V subunit UmuC | - |
| C6H39_RS30565 () | 14267..15715 | - | 1449 | WP_005622074.1 | FAD-binding oxidoreductase | - |
| C6H39_RS30570 () | 15754..16719 | - | 966 | WP_024420007.1 | isopenicillin N synthase family oxygenase | - |
| C6H39_RS30575 () | 16931..17204 | - | 274 | Protein_16 | IS21 family transposase | - |
| C6H39_RS30580 () | 17348..17857 | - | 510 | WP_005735414.1 | peptide deformylase | - |
| C6H39_RS30590 () | 18145..19374 | - | 1230 | WP_015062536.1 | IS91 family transposase IS801 | Transposase |
| C6H39_RS30595 () | 19355..19636 | - | 282 | WP_015062535.1 | hypothetical protein | - |
| C6H39_RS31875 () | 19919..20259 | + | 341 | Protein_20 | hypothetical protein | - |
| C6H39_RS30605 () | 20375..20647 | + | 273 | WP_060403602.1 | hypothetical protein | - |
| C6H39_RS30610 () | 20860..21534 | + | 675 | WP_081080454.1 | Mobilization protein A | Relaxase |
| C6H39_RS30615 () | 21531..22058 | - | 528 | WP_003348567.1 | hypothetical protein | - |
| C6H39_RS30620 () | 22174..22467 | - | 294 | WP_005730619.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| C6H39_RS30625 () | 22467..22652 | - | 186 | WP_003348562.1 | hypothetical protein | Antitoxin Detail |
| C6H39_RS30630 () | 22739..23032 | - | 294 | WP_060403601.1 | HU family DNA-binding protein | - |
| C6H39_RS30635 () | 23355..23636 | + | 282 | WP_015062535.1 | hypothetical protein | - |
| C6H39_RS30640 () | 23617..24846 | + | 1230 | WP_015062536.1 | IS91 family transposase IS801 | Transposase |
| C6H39_RS30645 () | 24949..25030 | - | 82 | Protein_29 | hypothetical protein | VF |
| C6H39_RS30650 () | 25027..25389 | - | 363 | Protein_30 | hypothetical protein | VF |
| C6H39_RS30660 () | 25682..25885 | - | 204 | WP_053486275.1 | hypothetical protein | - |
| C6H39_RS30665 () | 26280..26645 | + | 366 | WP_019740136.1 | helix-turn-helix transcriptional regulator | - |
| C6H39_RS30670 () | 26889..28844 | - | 1956 | WP_060402972.1 | hypothetical protein | Relaxase |
| C6H39_RS30675 () | 28855..29184 | - | 330 | WP_060402973.1 | ribbon-helix-helix protein, CopG family | - |
| C6H39_RS30680 () | 29444..29788 | + | 345 | WP_005622131.1 | hypothetical protein | - |
| C6H39_RS30690 () | 30086..30364 | + | 279 | WP_004661031.1 | mobilization protein | - |
| C6H39_RS30695 () | 30431..30631 | - | 201 | WP_004666908.1 | hypothetical protein | - |
| C6H39_RS30700 () | 30699..31535 | - | 837 | WP_103753198.1 | DUF945 domain-containing protein | - |
| C6H39_RS30705 () | 31582..31959 | - | 378 | WP_007247501.1 | hypothetical protein | - |
| C6H39_RS30715 () | 32465..33013 | + | 549 | WP_044424146.1 | hypothetical protein | - |
| C6H39_RS30720 () | 33171..33611 | - | 441 | WP_053486278.1 | hypothetical protein | - |
| C6H39_RS30725 () | 33842..34462 | + | 621 | WP_005747119.1 | Tn3 family transposase TnpR_TnEc1 | Transposase |
| C6H39_RS30735 () | 35071..35361 | + | 291 | WP_019331239.1 | hypothetical protein | - |
| C6H39_RS30745 () | 35620..36036 | - | 417 | WP_058886740.1 | hypothetical protein | - |
| C6H39_RS30755 () | 36622..36927 | - | 306 | WP_060402981.1 | hypothetical protein | - |
| C6H39_RS30760 () | 37448..37741 | - | 294 | WP_053479441.1 | hypothetical protein | - |
| C6H39_RS30765 () | 37761..38192 | - | 432 | WP_060402976.1 | hypothetical protein | - |
| C6H39_RS30770 () | 38295..38582 | - | 288 | WP_081080333.1 | hypothetical protein | - |
| C6H39_RS30775 () | 38599..38820 | - | 222 | WP_060402978.1 | hypothetical protein | - |
| C6H39_RS30780 () | 38906..39118 | - | 213 | WP_060402979.1 | hypothetical protein | - |
| C6H39_RS30785 () | 39221..39457 | - | 237 | WP_054098588.1 | hypothetical protein | - |
| C6H39_RS30790 () | 39484..39738 | - | 255 | WP_057411422.1 | hypothetical protein | - |
| C6H39_RS30795 () | 39784..40131 | - | 348 | WP_054098586.1 | type II toxin-antitoxin system ChpB family toxin | - |
| C6H39_RS30800 () | 40128..40382 | - | 255 | WP_054098585.1 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | - |
| C6H39_RS30805 () | 40458..41114 | - | 657 | WP_081080334.1 | tyrosine-type recombinase/integrase | - |
| C6H39_RS30810 () | 41346..42242 | - | 897 | WP_060402983.1 | hypothetical protein | - |
| C6H39_RS30815 () | 42681..43652 | - | 972 | WP_044320632.1 | ExeA family protein | - |
| C6H39_RS30820 () | 43642..45300 | - | 1659 | WP_060402980.1 | IS481 family transposase ISAzs36 | Transposase |
| C6H39_RS30825 () | 45284..45844 | - | 561 | WP_005782565.1 | Tn3 family transposase TnpR_ISArsp6 | Transposase |
| C6H39_RS30830 () | 45941..46222 | + | 282 | WP_015062535.1 | hypothetical protein | - |
| C6H39_RS30835 () | 46203..47432 | + | 1230 | WP_015062536.1 | IS91 family transposase IS801 | Transposase |
| C6H39_RS30845 () | 48168..48914 | - | 747 | WP_060402717.1 | hypothetical protein | - |
| C6H39_RS30850 () | 49396..49824 | - | 429 | WP_060402720.1 | GntR family transcriptional regulator | - |
| C6H39_RS30855 () | 49948..51345 | - | 1398 | Protein_64 | hypothetical protein | - |
| C6H39_RS30860 () | 51652..52290 | + | 639 | WP_060402718.1 | recombinase family protein | - |
| C6H39_RS30865 () | 52290..53645 | + | 1356 | WP_060402719.1 | IS481 family transposase ISAzs36 | Transposase |
| C6H39_RS30875 () | 53819..55048 | - | 1230 | WP_015062536.1 | IS91 family transposase IS801 | Transposase |
| C6H39_RS30880 () | 55029..55310 | - | 282 | WP_015062535.1 | hypothetical protein | - |
| C6H39_RS30885 () | 55346..55747 | + | 402 | WP_143519811.1 | hypothetical protein | - |
| C6H39_RS30890 () | 55732..56700 | + | 969 | WP_044422905.1 | AAA family ATPase | - |
| C6H39_RS30895 () | 56840..58132 | - | 1293 | WP_060403044.1 | MFS transporter | - |
| C6H39_RS30900 () | 58145..59122 | - | 978 | WP_060403045.1 | hypothetical protein | - |
| C6H39_RS30905 () | 59146..59841 | - | 696 | WP_044422903.1 | hypothetical protein | - |
| C6H39_RS30910 () | 59841..60833 | - | 993 | WP_060403046.1 | SagB/ThcOx family dehydrogenase | - |
| C6H39_RS30915 () | 61536..62126 | + | 591 | WP_031598379.1 | Tn3 family transposase ISPsy39 | Transposase |
| C6H39_RS30920 () | 62358..62588 | - | 231 | Protein_76 | hypothetical protein | - |
| C6H39_RS32135 () | 62682..62837 | - | 156 | WP_003319478.1 | hypothetical protein | - |
| C6H39_RS30925 () | 62939..63319 | - | 381 | WP_044310907.1 | hypothetical protein | - |
| C6H39_RS30930 () | 63423..63614 | - | 192 | WP_060407431.1 | hypothetical protein | - |
| C6H39_RS30940 () | 64000..64323 | - | 324 | WP_007253135.1 | hypothetical protein | - |
| C6H39_RS30945 () | 64316..65014 | - | 699 | WP_005734862.1 | Protein virC1 | VF |
| C6H39_RS30950 () | 65359..65994 | + | 636 | WP_031598774.1 | Tn3 family transposase TnpR_TnEc1 | Transposase |
| C6H39_RS30955 () | 66077..66355 | + | 279 | WP_057446745.1 | hypothetical protein | - |
| C6H39_RS30960 () | 66387..68321 | - | 1935 | Protein_84 | hypothetical protein | VF |
| C6H39_RS30965 () | 68636..68887 | + | 252 | WP_004643047.1 | antitoxin | - |
| C6H39_RS30970 () | 68884..69195 | + | 312 | WP_060404140.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| C6H39_RS30975 () | 69493..70317 | - | 825 | WP_060404139.1 | alpha/beta fold hydrolase | - |
| C6H39_RS30980 () | 70734..70994 | + | 261 | WP_103356806.1 | hypothetical protein | - |
| C6H39_RS30985 () | 71049..72071 | + | 1023 | WP_002551322.1 | IS21 family transposase ISPsy4 | Transposase |
| C6H39_RS30990 () | 72068..72877 | + | 810 | WP_005741073.1 | IS21 family transposase ISPsy4 | Transposase |
| C6H39_RS31005 () | 73944..74549 | - | 606 | WP_060403786.1 | T3SS effector protein kinase HopBF1 | - |
| C6H39_RS31010 () | 74674..75906 | + | 1233 | WP_104698134.1 | IS91 family transposase IS801 | Transposase |
| C6H39_RS31025 () | 76407..76688 | + | 282 | WP_060402791.1 | hypothetical protein | - |
| C6H39_RS31030 () | 76669..77346 | + | 678 | Protein_94 | IS91 family transposase IS801 | Transposase |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|