MGE detailed information
MGE type: Genomic_island MGE length: 30584 bp
Accession: NZ_LT963408 Location: 523659..554242 Organism: Pseudomonas syringae group genomosp. 3 isolate CFBP6411 Replicon: chromosome
Accession: NZ_LT963408 Location: 523659..554242 Organism: Pseudomonas syringae group genomosp. 3 isolate CFBP6411 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C6H37_RS02620 () | 518915..522950 | + | 4036 | Protein_476 | non-ribosomal peptide synthetase | - |
| C6H37_RS02630 () | 522947..523564 | + | 618 | WP_005737548.1 | 4'-phosphopantetheinyl transferase superfamily protein | - |
| C6H37_RS02635 () | 523659..524252 | - | 594 | WP_005737549.1 | hypothetical protein | - |
| C6H37_RS31155 () | 524309..524794 | - | 486 | Protein_479 | hypothetical protein | - |
| C6H37_RS02645 () | 525069..525536 | + | 468 | WP_005737550.1 | helix-turn-helix domain-containing protein | Antitoxin Detail |
| C6H37_RS02650 () | 525533..526108 | + | 576 | WP_005737551.1 | PIN domain-containing protein | Toxin Detail |
| C6H37_RS02655 () | 526289..526540 | + | 252 | WP_005737552.1 | helix-turn-helix domain-containing protein | - |
| C6H37_RS02660 () | 526540..527736 | + | 1197 | WP_005737554.1 | type II toxin-antitoxin system HipA family toxin | - |
| C6H37_RS02665 () | 527857..528141 | + | 285 | Protein_484 | N-acetylmuramoyl-L-alanine amidase | - |
| C6H37_RS02670 () | 528157..528906 | - | 750 | WP_103377603.1 | IS5 family transposase ISPa67 | Transposase |
| C6H37_RS02685 () | 529775..531616 | + | 1842 | WP_081082485.1 | Methyl-accepting chemotaxis protein McpQ | VF |
| C6H37_RS31520 () | 532538..532714 | - | 177 | WP_005739834.1 | hypothetical protein | - |
| C6H37_RS31160 () | 532700..532871 | - | 172 | Protein_488 | site-specific integrase | - |
| C6H37_RS02705 () | 533607..533960 | + | 354 | WP_088234445.1 | hypothetical protein | - |
| C6H37_RS02710 () | 534038..534463 | + | 426 | WP_158664121.1 | hypothetical protein | - |
| C6H37_RS02715 () | 534701..535255 | + | 555 | WP_088236350.1 | hypothetical protein | - |
| C6H37_RS02725 () | 535546..535923 | + | 378 | WP_088234447.1 | hypothetical protein | - |
| C6H37_RS02730 () | 535939..536889 | + | 951 | WP_024659454.1 | hypothetical protein | - |
| C6H37_RS02735 () | 536983..537234 | + | 252 | WP_122563396.1 | antirestriction protein ArdR | - |
| C6H37_RS02740 () | 537246..537494 | + | 249 | WP_024659453.1 | hypothetical protein | - |
| C6H37_RS02745 () | 537614..537874 | + | 261 | WP_024659452.1 | hypothetical protein | - |
| C6H37_RS02750 () | 538034..538288 | + | 255 | WP_024659451.1 | hypothetical protein | - |
| C6H37_RS30660 () | 538315..538686 | + | 372 | WP_158664122.1 | hypothetical protein | - |
| C6H37_RS02755 () | 539183..539566 | + | 384 | WP_010924788.1 | fluoride efflux transporter CrcB | - |
| C6H37_RS02760 () | 539577..539930 | + | 354 | WP_046235779.1 | DUF190 domain-containing protein | - |
| C6H37_RS02765 () | 539933..540478 | + | 546 | WP_010924789.1 | inorganic diphosphatase | - |
| C6H37_RS02770 () | 540478..541080 | + | 603 | WP_052739322.1 | uracil-DNA glycosylase | - |
| C6H37_RS02775 () | 541089..542258 | - | 1170 | WP_010924791.1 | TDT family transporter | - |
| C6H37_RS02780 () | 542376..543272 | + | 897 | WP_017709553.1 | LysR family transcriptional regulator | - |
| C6H37_RS02785 () | 543430..544422 | + | 993 | WP_017709554.1 | YncE family protein | - |
| C6H37_RS02790 () | 544748..545128 | + | 381 | WP_010924793.1 | hypothetical protein | - |
| C6H37_RS02795 () | 545609..545815 | + | 207 | WP_161806366.1 | hypothetical protein | - |
| C6H37_RS02800 () | 545844..546806 | - | 963 | WP_010924794.1 | Tyrosine recombinase XerC ; Integrase | Integrase |
| C6H37_RS02805 () | 547143..547391 | + | 249 | WP_002556076.1 | type II toxin-antitoxin system prevent-host-death family antitoxin | Antitoxin Detail |
| C6H37_RS02810 () | 547404..547754 | + | 351 | WP_003304103.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| C6H37_RS02815 () | 548117..548338 | - | 222 | WP_003422691.1 | hypothetical protein | - |
| C6H37_RS02820 () | 548406..549791 | - | 1386 | WP_103365183.1 | P-type conjugative transfer protein TrbL | - |
| C6H37_RS02825 () | 549995..550750 | - | 756 | WP_088234448.1 | P-type conjugative transfer protein TrbJ | - |
| C6H37_RS02830 () | 550791..551165 | - | 375 | WP_088234449.1 | conjugal transfer transcriptional regulator TraJ | - |
| C6H37_RS02835 () | 551458..551736 | - | 279 | WP_088234450.1 | conjugal transfer protein TraK | - |
| C6H37_RS02840 () | 551803..552528 | - | 726 | WP_088236353.1 | phage replication protein | - |
| C6H37_RS02845 () | 552650..552868 | - | 219 | WP_003316232.1 | hypothetical protein | - |
| C6H37_RS02850 () | 553169..554242 | - | 1074 | WP_162497093.1 | Tyrosine recombinase XerC ; Integrase | Integrase |
| C6H37_RS02860 () | 554462..556939 | - | 2478 | WP_005739833.1 | bifunctional diguanylate cyclase/phosphodiesterase | - |
| C6H37_RS02865 () | 557209..559059 | - | 1851 | WP_005614111.1 | RNA polymerase sigma factor RpoD | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|