MGE detailed information
MGE type: Mobilizable plasmid MGE length: 77492 bp
Accession: NZ_LT963406 Location: 1..77492 Organism: Pseudomonas syringae pv. avii isolate CFBP3846 Replicon: plasmid PP4
Accession: NZ_LT963406 Location: 1..77492 Organism: Pseudomonas syringae pv. avii isolate CFBP3846 Replicon: plasmid PP4
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C6H38_RS31045 () | 848..1531 | - | 684 | WP_058398779.1 | hypothetical protein | - |
| C6H38_RS31050 () | 1724..3343 | + | 1620 | WP_003425021.1 | hypothetical protein | VF |
| C6H38_RS31055 () | 3469..3804 | - | 336 | Protein_3 | DUF1264 domain-containing protein | - |
| C6H38_RS31060 () | 4027..4251 | + | 225 | WP_003425025.1 | hypothetical protein | - |
| C6H38_RS31065 () | 4685..5119 | - | 435 | WP_003425026.1 | helix-turn-helix domain-containing protein | - |
| C6H38_RS31070 () | 5211..5648 | + | 438 | Protein_6 | arsenic resistance protein | - |
| C6H38_RS31075 () | 5681..8647 | - | 2967 | WP_060402558.1 | Tn3 family transposase TnpA_ISPa40 | Transposase |
| C6H38_RS31080 () | 8651..9211 | - | 561 | WP_005737570.1 | Tn3 family transposase TnpR_ISPa40 | Transposase |
| C6H38_RS31090 () | 9951..10616 | + | 666 | WP_032641726.1 | hypothetical protein | - |
| C6H38_RS32345 () | 10772..10936 | + | 165 | WP_004666862.1 | hypothetical protein | - |
| C6H38_RS31095 () | 10970..11197 | - | 228 | Protein_11 | IS21 family transposase ISPsy4 | Transposase |
| C6H38_RS31100 () | 11194..12216 | - | 1023 | WP_002551322.1 | IS21 family transposase ISPsy4 | Transposase |
| C6H38_RS31105 () | 12462..12662 | + | 201 | WP_002555995.1 | hypothetical protein | Antitoxin Detail |
| C6H38_RS31110 () | 12662..12940 | + | 279 | WP_002555994.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| C6H38_RS31115 () | 13345..14859 | + | 1515 | WP_005740312.1 | IS21 family transposase ISPsy14 | Transposase |
| C6H38_RS31120 () | 14880..15635 | + | 756 | WP_060402572.1 | IS21 family transposase ISPsy40 | Transposase |
| C6H38_RS31130 () | 15842..16915 | + | 1074 | Protein_17 | hypothetical protein | - |
| C6H38_RS31135 () | 17034..17291 | + | 258 | WP_053479520.1 | transcriptional regulator | - |
| C6H38_RS32785 () | 17368..17505 | + | 138 | WP_172678953.1 | hypothetical protein | - |
| C6H38_RS31140 () | 17639..18067 | + | 429 | WP_060412549.1 | GntR family transcriptional regulator | - |
| C6H38_RS32790 () | 18147..18374 | + | 228 | WP_031598801.1 | hypothetical protein | - |
| C6H38_RS31150 () | 18773..20086 | + | 1314 | WP_060412548.1 | replication initiation protein | - |
| C6H38_RS31155 () | 20311..20604 | + | 294 | WP_060403601.1 | HU family DNA-binding protein | - |
| C6H38_RS31165 () | 20876..21169 | + | 294 | WP_005730619.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| C6H38_RS31170 () | 21285..21812 | + | 528 | WP_060412547.1 | hypothetical protein | - |
| C6H38_RS31175 () | 21809..22291 | - | 483 | Protein_26 | Mobilization protein A | Relaxase |
| C6H38_RS31185 () | 22585..23817 | - | 1233 | WP_104698147.1 | IS91 family transposase IS801 | Transposase |
| C6H38_RS31195 () | 24098..25330 | - | 1233 | WP_104698134.1 | IS91 family transposase IS801 | Transposase |
| C6H38_RS31200 () | 25467..26210 | + | 744 | WP_002556041.1 | hypothetical protein | - |
| C6H38_RS31205 () | 26207..27019 | + | 813 | WP_002556042.1 | DUF3037 domain-containing protein | - |
| C6H38_RS31215 () | 27261..28034 | - | 774 | WP_002556043.1 | hypothetical protein | - |
| C6H38_RS31220 () | 28545..29243 | + | 699 | WP_005734862.1 | Protein virC1 | VF |
| C6H38_RS31225 () | 29236..29559 | + | 324 | WP_007253135.1 | hypothetical protein | - |
| C6H38_RS31235 () | 29945..30136 | + | 192 | WP_060413540.1 | hypothetical protein | - |
| C6H38_RS32350 () | 30240..30386 | + | 147 | WP_158663735.1 | hypothetical protein | - |
| C6H38_RS31240 () | 30526..32040 | + | 1515 | WP_005740312.1 | IS21 family transposase ISPsy14 | Transposase |
| C6H38_RS31245 () | 32061..32816 | + | 756 | WP_060402572.1 | IS21 family transposase ISPsy40 | Transposase |
| C6H38_RS31255 () | 32922..33224 | + | 303 | Protein_38 | hypothetical protein | - |
| C6H38_RS32795 () | 33326..33481 | + | 156 | WP_003319478.1 | hypothetical protein | - |
| C6H38_RS31260 () | 33575..33823 | + | 249 | WP_044310906.1 | hypothetical protein | - |
| C6H38_RS32355 () | 33837..34001 | + | 165 | WP_154598117.1 | hypothetical protein | - |
| C6H38_RS31265 () | 34009..34359 | + | 351 | WP_135004263.1 | hypothetical protein | - |
| C6H38_RS31270 () | 34637..35440 | - | 804 | WP_031598096.1 | IS21 family transposase ISPsy20 | Transposase |
| C6H38_RS31275 () | 35433..36926 | - | 1494 | WP_104698145.1 | IS21 family transposase ISPsy20 | Transposase |
| C6H38_RS31280 () | 37049..37480 | + | 432 | Protein_45 | sulfotransferase family protein | - |
| C6H38_RS31285 () | 37544..38476 | + | 933 | WP_060413761.1 | IS5 family transposase ISPssy | Transposase |
| C6H38_RS31290 () | 38662..39027 | + | 366 | Protein_47 | sulfotransferase family protein | - |
| C6H38_RS31295 () | 39068..40270 | + | 1203 | WP_005734276.1 | aspartate aminotransferase family protein | - |
| C6H38_RS31300 () | 40307..40963 | + | 657 | WP_060414434.1 | SanC | - |
| C6H38_RS31305 () | 40963..41541 | + | 579 | WP_024420030.1 | AAA family ATPase | - |
| C6H38_RS31310 () | 41747..42013 | + | 267 | WP_044423204.1 | carbon storage regulator | - |
| C6H38_RS31320 () | 42359..43593 | + | 1235 | Protein_52 | IS91 family transposase | - |
| C6H38_RS31330 () | 43775..44311 | - | 537 | Protein_53 | hypothetical protein | - |
| C6H38_RS31335 () | 44626..45045 | - | 420 | WP_057447521.1 | hypothetical protein | - |
| C6H38_RS32360 () | 45213..45614 | - | 402 | WP_158663736.1 | hypothetical protein | - |
| C6H38_RS31350 () | 46038..46763 | - | 726 | WP_057447522.1 | relaxosome protein | - |
| C6H38_RS31355 () | 47128..47517 | + | 390 | WP_015060693.1 | hypothetical protein | - |
| C6H38_RS31360 () | 47532..48104 | - | 573 | WP_002556108.1 | hypothetical protein | - |
| C6H38_RS31365 () | 48101..48835 | - | 735 | WP_015060692.1 | hypothetical protein | - |
| C6H38_RS31375 () | 49141..49734 | - | 594 | WP_060412325.1 | single-stranded DNA-binding protein | - |
| C6H38_RS31380 () | 49762..50046 | - | 285 | WP_060412324.1 | hypothetical protein | - |
| C6H38_RS31385 () | 50073..52238 | - | 2166 | WP_060412323.1 | type IA DNA topoisomerase | - |
| C6H38_RS31390 () | 52266..52628 | - | 363 | WP_060412322.1 | killer protein | - |
| C6H38_RS31395 () | 52669..54342 | - | 1674 | WP_060412321.1 | type IV secretory system conjugative DNA transfer family protein | - |
| C6H38_RS31400 () | 54342..54575 | - | 234 | WP_060412320.1 | hypothetical protein | - |
| C6H38_RS31405 () | 54691..54984 | - | 294 | WP_060412319.1 | hypothetical protein | - |
| C6H38_RS31410 () | 55087..56103 | - | 1017 | WP_031598824.1 | hypothetical protein | - |
| C6H38_RS31415 () | 56139..56339 | - | 201 | WP_031598826.1 | hypothetical protein | VF |
| C6H38_RS31420 () | 56339..56572 | - | 234 | WP_060412318.1 | hypothetical protein | - |
| C6H38_RS31430 () | 57044..57853 | - | 810 | WP_104698146.1 | IS21 family transposase ISPsy4 | Transposase |
| C6H38_RS31435 () | 57850..58872 | - | 1023 | WP_002551322.1 | IS21 family transposase ISPsy4 | Transposase |
| C6H38_RS31440 () | 58961..59044 | + | 84 | Protein_72 | DUF4113 domain-containing protein | - |
| C6H38_RS31445 () | 59118..59387 | + | 270 | WP_003348774.1 | hypothetical protein | - |
| C6H38_RS31450 () | 59459..59743 | - | 285 | WP_003348777.1 | putative addiction module antidote protein | Antitoxin Detail |
| C6H38_RS31455 () | 59740..60039 | - | 300 | WP_011282511.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| C6H38_RS31460 () | 60420..61175 | - | 756 | WP_060402572.1 | IS21 family transposase ISPsy40 | Transposase |
| C6H38_RS31465 () | 61196..62710 | - | 1515 | WP_005740312.1 | IS21 family transposase ISPsy14 | Transposase |
| C6H38_RS31475 () | 63154..63570 | + | 417 | WP_003348781.1 | hypothetical protein | - |
| C6H38_RS31485 () | 63965..64618 | + | 654 | WP_003348786.1 | AAA family ATPase | - |
| C6H38_RS31490 () | 64707..64958 | + | 252 | WP_003348789.1 | ribbon-helix-helix protein, CopG family | - |
| C6H38_RS31495 () | 65226..65867 | + | 642 | WP_058398749.1 | SOS response-associated peptidase family protein | - |
| C6H38_RS31500 () | 66097..66384 | + | 288 | WP_003319480.1 | hypothetical protein | - |
| C6H38_RS31505 () | 66473..66712 | + | 240 | WP_058398748.1 | hypothetical protein | - |
| C6H38_RS31510 () | 66887..67909 | + | 1023 | WP_002551322.1 | IS21 family transposase ISPsy4 | Transposase |
| C6H38_RS31515 () | 67906..68715 | + | 810 | WP_005741073.1 | IS21 family transposase ISPsy4 | Transposase |
| C6H38_RS31525 () | 68989..69480 | + | 492 | WP_058398746.1 | hypothetical protein | - |
| C6H38_RS32365 () | 69501..69659 | + | 159 | WP_158607438.1 | hypothetical protein | - |
| C6H38_RS31535 () | 70061..70336 | + | 276 | WP_058398786.1 | hypothetical protein | - |
| C6H38_RS31540 () | 70381..70686 | + | 306 | WP_058398785.1 | hypothetical protein | - |
| C6H38_RS31545 () | 70698..70958 | + | 261 | WP_058398784.1 | hypothetical protein | - |
| C6H38_RS31550 () | 71057..71473 | + | 417 | WP_058398783.1 | hypothetical protein | - |
| C6H38_RS31555 () | 71663..72046 | + | 384 | WP_058398782.1 | hypothetical protein | - |
| C6H38_RS32370 () | 72297..72629 | + | 333 | WP_003317539.1 | IS66 family transposase ISPpu19 | Transposase |
| C6H38_RS32375 () | 72626..72961 | + | 336 | WP_004409766.1 | IS66 family transposase ISPsy43 | Transposase |
| C6H38_RS31575 () | 73045..74571 | + | 1527 | WP_054090576.1 | IS66 family transposase ISPsy43 | Transposase |
| C6H38_RS31580 () | 74858..76894 | + | 2037 | WP_054080285.1 | IS66 family transposase ISPsy43 | VF |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|