MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 43975 bp
Accession: NZ_LT963403 Location: 1..43975 Organism: Pseudomonas syringae pv. avii isolate CFBP3846 Replicon: plasmid PP1
Accession: NZ_LT963403 Location: 1..43975 Organism: Pseudomonas syringae pv. avii isolate CFBP3846 Replicon: plasmid PP1
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C6H38_RS29340 () | 33..842 | - | 810 | WP_005741073.1 | IS21 family transposase ISPsy4 | Transposase |
| C6H38_RS29345 () | 839..1861 | - | 1023 | WP_002551322.1 | IS21 family transposase ISPsy4 | Transposase |
| C6H38_RS29350 () | 1905..2240 | - | 336 | WP_103388890.1 | hypothetical protein | - |
| C6H38_RS29355 () | 2278..3138 | - | 861 | WP_057415931.1 | MurR/RpiR family transcriptional regulator | - |
| C6H38_RS29360 () | 3485..3739 | + | 255 | WP_024421297.1 | plasmid stabilization protein | Antitoxin Detail |
| C6H38_RS29365 () | 3736..4152 | + | 417 | WP_004642352.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| C6H38_RS29370 () | 4414..6369 | - | 1956 | WP_104698131.1 | hypothetical protein | Relaxase |
| C6H38_RS29375 () | 6380..6709 | - | 330 | WP_003344297.1 | ribbon-helix-helix protein, CopG family | - |
| C6H38_RS29380 () | 6969..7313 | + | 345 | WP_031599149.1 | hypothetical protein | - |
| C6H38_RS29390 () | 7611..7889 | + | 279 | WP_004661031.1 | mobilization protein | - |
| C6H38_RS29395 () | 7956..8156 | - | 201 | WP_004666908.1 | hypothetical protein | - |
| C6H38_RS29400 () | 8224..8676 | - | 453 | Protein_11 | DUF932 domain-containing protein | - |
| C6H38_RS29405 () | 8763..9239 | + | 477 | Protein_12 | IS21 family transposase ISPsy4 | Transposase |
| C6H38_RS29415 () | 9591..10820 | + | 1230 | WP_103409974.1 | IS91 family transposase IS801 | Transposase |
| C6H38_RS29425 () | 11003..11551 | + | 549 | Protein_14 | IS21 family transposase ISPsy4 | Transposase |
| C6H38_RS29430 () | 11548..12357 | + | 810 | WP_005741073.1 | IS21 family transposase ISPsy4 | Transposase |
| C6H38_RS29435 () | 12393..12794 | - | 402 | Protein_16 | DUF945 domain-containing protein | - |
| C6H38_RS29440 () | 12841..13218 | - | 378 | WP_007247501.1 | hypothetical protein | - |
| C6H38_RS29445 () | 13693..14607 | - | 915 | WP_057447511.1 | hypothetical protein | - |
| C6H38_RS29455 () | 14908..15324 | - | 417 | WP_024420291.1 | hypothetical protein | - |
| C6H38_RS29460 () | 15386..15673 | - | 288 | WP_005622028.1 | helix-turn-helix domain-containing protein | - |
| C6H38_RS29465 () | 15673..16011 | - | 339 | WP_024420290.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| C6H38_RS29470 () | 16220..16840 | + | 621 | WP_005747119.1 | Tn3 family transposase TnpR_TnEc1 | Transposase |
| C6H38_RS29475 () | 17360..17527 | + | 168 | Protein_23 | IS91 family transposase IS801 | Transposase |
| C6H38_RS29485 () | 17736..18875 | - | 1140 | WP_060402230.1 | hypothetical protein | - |
| C6H38_RS29490 () | 18881..19624 | - | 744 | WP_162273801.1 | type III effector | - |
| C6H38_RS32590 () | 19628..19732 | - | 105 | Protein_26 | type III effector | - |
| C6H38_RS29495 () | 19985..20413 | - | 429 | WP_005783154.1 | CesT family type III secretion system chaperone | - |
| C6H38_RS29500 () | 20889..21290 | - | 402 | WP_057443138.1 | S24 family peptidase | - |
| C6H38_RS29505 () | 21636..21854 | - | 219 | WP_004666922.1 | chromosome partitioning protein ParB | - |
| C6H38_RS29510 () | 21875..22504 | - | 630 | WP_004666923.1 | AAA family ATPase | - |
| C6H38_RS29515 () | 22810..23787 | + | 978 | WP_020306143.1 | IS5 family transposase IS52 | Transposase |
| C6H38_RS29520 () | 23991..24743 | + | 753 | Protein_32 | IS21 family transposase ISPsy4 | Transposase |
| C6H38_RS29525 () | 24842..26074 | + | 1233 | WP_104698133.1 | IS91 family transposase IS801 | Transposase |
| C6H38_RS29535 () | 26355..27587 | + | 1233 | WP_104698134.1 | IS91 family transposase IS801 | Transposase |
| C6H38_RS29545 () | 27779..28477 | - | 699 | WP_024421138.1 | GNAT family N-acetyltransferase | - |
| C6H38_RS29550 () | 28717..29004 | - | 288 | WP_060401174.1 | HU family DNA-binding protein | - |
| C6H38_RS29555 () | 29227..30540 | - | 1314 | WP_099264720.1 | replication initiation protein | - |
| C6H38_RS32770 () | 30938..31165 | - | 228 | WP_024421147.1 | hypothetical protein | - |
| C6H38_RS29565 () | 31244..31672 | - | 429 | WP_002556024.1 | GntR family transcriptional regulator | - |
| C6H38_RS29570 () | 31860..32423 | - | 564 | WP_060402321.1 | hypothetical protein | - |
| C6H38_RS29575 () | 32444..32866 | - | 423 | WP_060413928.1 | hypothetical protein | - |
| C6H38_RS29580 () | 32894..35182 | - | 2289 | WP_103379297.1 | type IV secretory system conjugative DNA transfer family protein | - |
| C6H38_RS29585 () | 35169..36254 | - | 1086 | WP_104698132.1 | thioredoxin fold domain-containing protein | - |
| C6H38_RS29590 () | 36346..36546 | + | 201 | WP_031598125.1 | type II toxin-antitoxin system VapB family antitoxin | Antitoxin Detail |
| C6H38_RS29595 () | 36543..36920 | + | 378 | WP_011106996.1 | PIN domain-containing protein | Toxin Detail |
| C6H38_RS29600 () | 36910..38112 | - | 1203 | WP_103724603.1 | conjugal transfer protein | - |
| C6H38_RS29605 () | 38205..38855 | - | 651 | WP_060413746.1 | plasmid IncI1-type surface exclusion protein ExcA | - |
| C6H38_RS29610 () | 38852..39097 | - | 246 | WP_003344389.1 | hypothetical protein | - |
| C6H38_RS29615 () | 39199..41343 | - | 2145 | WP_005740374.1 | DotA/TraY family protein | - |
| C6H38_RS29620 () | 41372..41974 | - | 603 | WP_005740375.1 | conjugal transfer protein TraX | - |
| C6H38_RS29625 () | 41964..43178 | - | 1215 | WP_002556016.1 | conjugal transfer protein TraW | - |
| C6H38_RS29630 () | 43190..43579 | - | 390 | WP_005740376.1 | hypothetical protein | - |
| C6H38_RS29635 () | 43601..43837 | - | 237 | WP_005740377.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|