MGE detailed information
MGE type: Genomic_island MGE length: 24473 bp
Accession: NZ_LT906474 Location: 3656969..3681441 Organism: Escherichia coli strain NCTC122 Replicon: chromosome
Accession: NZ_LT906474 Location: 3656969..3681441 Organism: Escherichia coli strain NCTC122 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CKV98_RS23845 () | 3651986..3652338 | - | 353 | Protein_3413 | peptide chain release factor H | - |
| CKV98_RS18615 () | 3652334..3652540 | - | 207 | Protein_3414 | RtcB family protein | - |
| CKV98_RS18625 () | 3652857..3653309 | - | 453 | WP_071780660.1 | GNAT family N-acetyltransferase | - |
| CKV98_RS18630 () | 3653306..3654361 | - | 1056 | WP_001226164.1 | DNA polymerase IV | - |
| CKV98_RS18635 () | 3654432..3655217 | - | 786 | WP_000207555.1 | putative lateral flagellar export/assembly protein LafU | - |
| CKV98_RS18640 () | 3655189..3656911 | + | 1723 | Protein_3418 | flagellar biosynthesis protein FlhA | - |
| CKV98_RS18645 () | 3656990..3657346 | + | 357 | WP_047402977.1 | type II toxin-antitoxin system HicB family antitoxin | - |
| CKV98_RS18650 () | 3657403..3658176 | - | 774 | WP_122990173.1 | hypothetical protein | VF |
| CKV98_RS18655 () | 3658362..3658622 | + | 261 | WP_000729704.1 | type II toxin-antitoxin system antitoxin DinJ | Antitoxin Detail |
| CKV98_RS18660 () | 3658625..3658903 | + | 279 | WP_000615979.1 | type II toxin-antitoxin system mRNA interferase toxin YafQ | Toxin Detail |
| CKV98_RS18665 () | 3659059..3659799 | + | 741 | WP_001225679.1 | murein L,D-transpeptidase | - |
| CKV98_RS18670 () | 3659770..3660537 | - | 768 | WP_000333380.1 | class II glutamine amidotransferase | - |
| CKV98_RS18675 () | 3660746..3661324 | - | 579 | WP_000284050.1 | Phosphoheptose isomerase | VF |
| CKV98_RS18680 () | 3661564..3664008 | + | 2445 | WP_047402958.1 | Acyl-coenzyme A dehydrogenase | VF |
| CKV98_RS18685 () | 3664051..3664497 | - | 447 | WP_047402973.1 | Ivy family C-type lysozyme inhibitor | - |
| CKV98_RS18690 () | 3664678..3665448 | + | 771 | WP_001118041.1 | 2-oxoglutaramate amidase | - |
| CKV98_RS18695 () | 3665500..3665874 | - | 375 | Protein_3429 | ISAs1 family transposase | - |
| CKV98_RS18700 () | 3665920..3667056 | - | 1137 | Protein_3430 | ISAs1 family transposase ISEc1 | Transposase |
| CKV98_RS18715 () | 3667802..3668311 | - | 510 | WP_001419315.1 | sel1 repeat family protein | - |
| CKV98_RS18720 () | 3668380..3669864 | - | 1485 | Protein_3432 | hypothetical protein | VF |
| CKV98_RS18725 () | 3670070..3670807 | - | 738 | WP_001625207.1 | hypothetical protein | VF |
| CKV98_RS18730 () | 3670911..3671516 | - | 606 | Protein_3434 | RHS repeat-associated core domain-containing protein | - |
| CKV98_RS18735 () | 3671529..3672665 | - | 1137 | WP_053889911.1 | ISAs1 family transposase ISEc1 | Transposase |
| CKV98_RS18745 () | 3673014..3673451 | - | 438 | WP_001350058.1 | hypothetical protein | - |
| CKV98_RS18750 () | 3673411..3674701 | - | 1291 | Protein_3437 | hypothetical protein | VF |
| CKV98_RS18755 () | 3674755..3675258 | + | 504 | Protein_3438 | hypothetical protein | VF |
| CKV98_RS18760 () | 3675282..3675764 | + | 483 | WP_001284199.1 | Major exported protein | VF |
| CKV98_RS18765 () | 3675808..3676722 | + | 915 | WP_000908057.1 | hypothetical protein | - |
| CKV98_RS18770 () | 3676732..3677211 | + | 480 | WP_001236652.1 | hypothetical protein | - |
| CKV98_RS18775 () | 3677348..3678133 | - | 786 | WP_001086142.1 | aminopeptidase | - |
| CKV98_RS18785 () | 3678670..3679401 | - | 732 | WP_001300756.1 | DNA polymerase III subunit epsilon | - |
| CKV98_RS18790 () | 3679466..3679933 | + | 468 | WP_000917883.1 | ribonuclease HI | - |
| CKV98_RS18795 () | 3679930..3680652 | - | 723 | WP_001295200.1 | class I SAM-dependent methyltransferase | - |
| CKV98_RS18800 () | 3680686..3681441 | + | 756 | WP_001052721.1 | hydroxyacylglutathione hydrolase | - |
| CKV98_RS18805 () | 3681513..3682871 | + | 1359 | WP_000644685.1 | murein transglycosylase D | - |
| CKV98_RS18810 () | 3682919..3683689 | - | 771 | WP_000211686.1 | class I SAM-dependent methyltransferase | - |
| CKV98_RS18815 () | 3683767..3684567 | - | 801 | WP_001230983.1 | endonuclease/exonuclease/phosphatase family protein | - |
| CKV98_RS18820 () | 3684808..3685722 | + | 915 | WP_000648583.1 | LysR family transcriptional regulator | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli C | Genomic island | TA75077 | NZ_CP020543 | 3657894..3682366 | 0 |