MGE detailed information
MGE type: Genomic_island MGE length: 23031 bp
Accession: NZ_LT906474 Location: 3620826..3643856 Organism: Escherichia coli strain NCTC122 Replicon: chromosome
Accession: NZ_LT906474 Location: 3620826..3643856 Organism: Escherichia coli strain NCTC122 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CKV98_RS18395 () | 3616141..3617649 | + | 1509 | WP_001189111.1 | group II intron reverse transcriptase/maturase | - |
| CKV98_RS18400 () | 3617730..3618217 | + | 488 | Protein_3372 | IS3 family transposase | - |
| CKV98_RS18405 () | 3618115..3619413 | - | 1299 | WP_000342159.1 | IS256 family transposase | - |
| CKV98_RS18415 () | 3619631..3619795 | - | 165 | Protein_3374 | transposase domain-containing protein | - |
| CKV98_RS23715 () | 3619740..3620003 | - | 264 | WP_001247776.1 | transposase | - |
| CKV98_RS23720 () | 3620018..3620281 | + | 264 | WP_001295708.1 | hypothetical protein | - |
| CKV98_RS18425 () | 3620510..3620791 | + | 282 | WP_000643628.1 | helix-turn-helix domain-containing protein | - |
| CKV98_RS18430 () | 3620826..3621395 | + | 570 | WP_000350435.1 | hypothetical protein | VF |
| CKV98_RS18435 () | 3621501..3624383 | + | 2883 | WP_000101612.1 | ATP-dependent Clp protease ATP-binding subunit ClpC | VF |
| CKV98_RS18440 () | 3624383..3624574 | + | 192 | WP_001295707.1 | hypothetical protein | - |
| CKV98_RS18445 () | 3624635..3626363 | + | 1729 | Protein_3381 | ATP-dependent metallopeptidase FtsH/Yme1/Tma family protein | - |
| CKV98_RS18450 () | 3626451..3626909 | + | 459 | WP_001275372.1 | Spore protein SP21 | VF |
| CKV98_RS18455 () | 3626932..3627846 | + | 915 | WP_001022485.1 | heat resistance protein YfdX1 | - |
| CKV98_RS18460 () | 3627949..3628836 | + | 888 | WP_081508864.1 | heat resistance protein YfdX2 | - |
| CKV98_RS18465 () | 3628926..3629537 | + | 612 | WP_001090787.1 | heat resistance membrane protein HdeD-GI | - |
| CKV98_RS18470 () | 3629617..3630762 | + | 1146 | WP_001166995.1 | hypothetical protein | - |
| CKV98_RS18475 () | 3630752..3631192 | + | 441 | WP_000786817.1 | heat resistance system thioredoxin Trx-GI | - |
| CKV98_RS18480 () | 3631196..3632911 | + | 1716 | WP_001295706.1 | heat resistance system K+/H+ antiporter KefB-GI | - |
| CKV98_RS18485 () | 3632908..3633405 | + | 498 | WP_000843382.1 | heat resistance protein PsiE-GI | - |
| CKV98_RS18490 () | 3633383..3634348 | + | 966 | WP_000196689.1 | M48 family metalloprotease | - |
| CKV98_RS18495 () | 3634373..3635524 | + | 1152 | WP_000323729.1 | hypothetical protein | VF |
| CKV98_RS18500 () | 3635749..3636318 | - | 570 | Protein_3392 | IS5 family transposase ISThi1 | Transposase |
| CKV98_RS18505 () | 3636314..3637008 | - | 695 | Protein_3393 | IS5 family transposase ISThi1 | Transposase |
| CKV98_RS18510 () | 3637440..3638303 | + | 864 | WP_081508865.1 | GTPase family protein | - |
| CKV98_RS18515 () | 3638395..3639216 | + | 822 | WP_000197388.1 | DUF945 domain-containing protein | - |
| CKV98_RS18520 () | 3639433..3640134 | + | 702 | WP_000189411.1 | WYL domain-containing protein | - |
| CKV98_RS18525 () | 3640175..3640411 | + | 237 | WP_001144031.1 | hypothetical protein | - |
| CKV98_RS18530 () | 3640411..3640854 | + | 444 | WP_000649865.1 | hypothetical protein | - |
| CKV98_RS18535 () | 3640877..3641344 | + | 468 | WP_001385283.1 | hypothetical protein | - |
| CKV98_RS18540 () | 3641421..3641660 | + | 240 | WP_000194654.1 | DUF905 domain-containing protein | - |
| CKV98_RS18545 () | 3641758..3642216 | + | 459 | WP_000211838.1 | antirestriction protein | - |
| CKV98_RS18550 () | 3642232..3642708 | + | 477 | WP_000811693.1 | RadC family protein | - |
| CKV98_RS18555 () | 3642717..3642938 | + | 222 | WP_000691994.1 | DUF987 domain-containing protein | - |
| CKV98_RS18560 () | 3642957..3643274 | + | 318 | WP_000070396.1 | type IV toxin-antitoxin system antitoxin YafW | Antitoxin Detail |
| CKV98_RS18565 () | 3643295..3643636 | + | 342 | WP_000854680.1 | type IV toxin-antitoxin system toxin YkfI | Toxin Detail |
| CKV98_RS18575 () | 3644208..3645461 | - | 1254 | WP_000893272.1 | glutamate-5-semialdehyde dehydrogenase | - |
| CKV98_RS18580 () | 3645473..3646576 | - | 1104 | WP_001285288.1 | glutamate 5-kinase | - |
| CKV98_RS18585 () | 3646864..3647919 | + | 1056 | WP_045145434.1 | phosphoporin PhoE | - |
| CKV98_RS18590 () | 3647958..3648359 | - | 402 | WP_047402959.1 | sigma factor-binding protein Crl | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli C | Genomic island | TA75076 | NZ_CP020543 | 3621751..3644781 | 0 |