MGE detailed information
MGE type: IS/Tn MGE length: 3905 bp
Accession: NZ_LT897798 Location: 526140..530044 Organism: Vibrio cholerae isolate Vibrio cholerae str. BC1071 Replicon: chromosome
Accession: NZ_LT897798 Location: 526140..530044 Organism: Vibrio cholerae isolate Vibrio cholerae str. BC1071 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| VCBK1071_RS17180 () | 522049..522489 | + | 441 | WP_001966102.1 | DUF1311 domain-containing protein | - |
| VCBK1071_RS17195 () | 522648..523652 | + | 1005 | WP_101411842.1 | LD-carboxypeptidase | - |
| VCBK1071_RS17200 () | 523743..524114 | + | 372 | WP_172440206.1 | DUF4144 domain-containing protein | - |
| VCBK1071_RS17205 () | 524143..525102 | - | 960 | WP_101411759.1 | IS30 family transposase | - |
| VCBK1071_RS17215 () | 525336..525737 | + | 402 | WP_052469078.1 | hypothetical protein | - |
| VCBK1071_RS17220 () | 525870..526019 | - | 150 | Protein_586 | RES family NAD+ phosphorylase | - |
| VCBK1071_RS17225 () | 526140..527180 | + | 1041 | WP_101411691.1 | IS481 family transposase ISVvu4 | Transposase |
| VCBK1071_RS17230 () | 527332..527610 | - | 279 | WP_000578471.1 | type II toxin-antitoxin system mRNA interferase toxin, RelE/StbE family | Toxin Detail |
| VCBK1071_RS17235 () | 527607..527891 | - | 285 | WP_033932134.1 | type II toxin-antitoxin system RelB/DinJ family antitoxin | Antitoxin Detail |
| VCBK1071_RS17240 () | 528085..528402 | - | 318 | WP_059261326.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| VCBK1071_RS17245 () | 528421..528663 | - | 243 | WP_000288450.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| VCBK1071_RS17250 () | 528915..529271 | + | 357 | WP_158087279.1 | hypothetical protein | - |
| VCBK1071_RS17255 () | 529415..530044 | + | 630 | WP_001009011.1 | Chloramphenicol acetyltransferase | VF |
| VCBK1071_RS17260 () | 530341..530509 | + | 169 | Protein_594 | DUF645 family protein | - |
| VCBK1071_RS17265 () | 530716..531027 | + | 312 | WP_000623749.1 | hypothetical protein | - |
| VCBK1071_RS17270 () | 531206..531709 | + | 504 | WP_101411846.1 | DinB family protein | - |
| VCBK1071_RS17275 () | 531827..532144 | - | 318 | WP_101411848.1 | CcdB family protein | - |
| VCBK1071_RS17280 () | 532144..532389 | - | 246 | WP_001260797.1 | type II toxin-antitoxin system CcdA family antitoxin | - |
| VCBK1071_RS17285 () | 532569..533081 | + | 513 | Protein_599 | MazG-related protein | - |
| VCBK1071_RS17290 () | 533222..533656 | + | 435 | WP_084980789.1 | GNAT family N-acetyltransferase | - |
| VCBK1071_RS17295 () | 533792..534406 | + | 615 | WP_172440161.1 | hypothetical protein | - |
| VCBK1071_RS17305 () | 534530..534847 | - | 318 | WP_000077449.1 | CcdB family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|