NZ_LT8538841..27106

MGE detailed information

MGE type: Non-Mobilizable plasmid        MGE length: 27106 bp
Accession: NZ_LT853884        Location: 1..27106         Organism: Xanthomonas fragariae strain PD885       Replicon: plasmid pPD885-27


Gene structure

The 5 kb flanking regions of this MGE are displayed.

PD885_RS20030PD885_RS20035PD885_RS20075PD885_RS20080PD885_RS20085PD885_RS20090PD885_RS20110PD885_RS20115PD885_RS20120PD885_RS21780PD885_RS20155PD885_RS20160PD885_RS21660PD885_RS21220PD885_RS21665PD885_RS20175PD885_RS20180PD885_RS20185PD885_RS20190PD885_RS20210PD885_RS20215PD885_RS20220PD885_RS20225PD885_RS20230PD885_RS20040PD885_RS20045PD885_RS20050PD885_RS20055PD885_RS20060PD885_RS20065PD885_RS20070PD885_RS20095PD885_RS20100PD885_RS20105PD885_RS20125PD885_RS21775PD885_RS21655PD885_RS20145PD885_RS20150PD885_RS20170PD885_RS20195PD885_RS20200
Location: 1..1416 (1416 bp)
Type: Others
Protein ID: Protein_0
Location: 1682..1946 (265 bp)
Type: Others
Protein ID: Protein_1
Location: 7457..7819 (363 bp)
Type: Relaxase
Protein ID: WP_088057153.1
Location: 7809..10175 (2367 bp)
Type: Others
Protein ID: WP_108862514.1
Location: 10335..10553 (219 bp)
Type: Others
Protein ID: WP_088057162.1
Location: 10653..11012 (360 bp)
Type: Others
Protein ID: WP_088057155.1
Location: 12669..13067 (399 bp)
Type: Others
Protein ID: WP_108772809.1
Location: 13109..13672 (564 bp)
Type: Transposase
Protein ID: WP_108772810.1
Location: 13715..13990 (276 bp)
Type: Others
Protein ID: Protein_18
Location: 15026..15613 (588 bp)
Type: Others
Protein ID: WP_197685834.1
Location: 17587..17838 (252 bp)
Type: Others
Protein ID: WP_002804328.1
Location: 17835..18230 (396 bp)
Type: Others
Protein ID: WP_002804329.1
Location: 18236..18651 (416 bp)
Type: Others
Protein ID: Protein_27
Location: 19371..19814 (444 bp)
Type: Others
Protein ID: WP_145954081.1
Location: 19821..19985 (165 bp)
Type: Others
Protein ID: WP_156775378.1
Location: 20173..20748 (576 bp)
Type: Transposase
Protein ID: WP_040762337.1
Location: 20759..21025 (267 bp)
Type: Others
Protein ID: WP_002804333.1
Location: 21160..22875 (1716 bp)
Type: Others
Protein ID: WP_083215115.1
Location: 22944..23126 (183 bp)
Type: Others
Protein ID: WP_134656646.1
Location: 24409..24834 (426 bp)
Type: Others
Protein ID: WP_172404533.1
Location: 24876..25427 (552 bp)
Type: Transposase
Protein ID: WP_088057164.1
Location: 25530..26162 (633 bp)
Type: Others
Protein ID: WP_088057159.1
Location: 26155..26517 (363 bp)
Type: Others
Protein ID: WP_088057160.1
Location: 26600..26923 (324 bp)
Type: Others
Protein ID: WP_088057161.1
Location: 2567..3637 (1071 bp)
Type: VF
Protein ID: WP_088057146.1
Location: 3661..3906 (246 bp)
Type: VF
Protein ID: WP_088057147.1
Location: 3903..4343 (441 bp)
Type: Others
Protein ID: WP_088057148.1
Location: 4353..5063 (711 bp)
Type: VF
Protein ID: WP_088057149.1
Location: 5422..5874 (453 bp)
Type: Others
Protein ID: WP_088057150.1
Location: 5877..6605 (729 bp)
Type: Others
Protein ID: WP_088057151.1
Location: 6616..6990 (375 bp)
Type: Others
Protein ID: WP_159091986.1
Location: 11258..11671 (414 bp)
Type: Others
Protein ID: WP_088057156.1
Location: 11747..12040 (294 bp)
Type: Toxin
Protein ID: WP_088057157.1
Location: 12028..12300 (273 bp)
Type: Antitoxin
Protein ID: WP_088057158.1
Location: 13992..14420 (429 bp)
Type: Others
Protein ID: WP_002804319.1
Location: 14622..14993 (372 bp)
Type: Others
Protein ID: WP_197685833.1
Location: 15944..16513 (570 bp)
Type: Others
Protein ID: WP_172404532.1
Location: 16628..16936 (309 bp)
Type: Others
Protein ID: WP_002804321.1
Location: 16957..17421 (465 bp)
Type: Others
Protein ID: WP_002804324.1
Location: 18918..19319 (402 bp)
Type: Others
Protein ID: WP_002804331.1
Location: 23312..23596 (285 bp)
Type: Toxin
Protein ID: WP_002804295.1
Location: 23584..23862 (279 bp)
Type: Antitoxin
Protein ID: WP_002804296.1
ToxinAntibiotic ResistanceTransposaseIntegraseOthersAntitoxinVirulence FactorRelaxaseoriT
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Locus tag
Coordinates
Strand
Size (bp)
Protein ID
Product
Description
PD885_RS20030 ()1..1416+1416Protein_0replication protein-
PD885_RS20035 ()1682..1946+265Protein_1hypothetical protein-
PD885_RS20040 ()2567..3637-1071WP_088057146.1Type IV secretion system protein VirB6VF
PD885_RS20045 ()3661..3906-246WP_088057147.1hypothetical proteinVF
PD885_RS20050 ()3903..4343-441WP_088057148.1hypothetical protein-
PD885_RS20055 ()4353..5063-711WP_088057149.1Type IV secretion system protein virB5VF
PD885_RS20060 ()5422..5874-453WP_088057150.1hypothetical protein-
PD885_RS20065 ()5877..6605-729WP_088057151.1hypothetical protein-
PD885_RS20070 ()6616..6990-375WP_159091986.1hypothetical protein-
PD885_RS20075 ()7457..7819+363WP_088057153.1hypothetical proteinRelaxase
PD885_RS20080 ()7809..10175+2367WP_108862514.1hypothetical protein-
PD885_RS20085 ()10335..10553+219WP_088057162.1chromosome partitioning protein ParB-
PD885_RS20090 ()10653..11012+360WP_088057155.1hypothetical protein-
PD885_RS20095 ()11258..11671-414WP_088057156.1hypothetical protein-
PD885_RS20100 ()11747..12040-294WP_088057157.1type II toxin-antitoxin system RelE/ParE family toxinToxin Detail
PD885_RS20105 ()12028..12300-273WP_088057158.1CopG family ribbon-helix-helix proteinAntitoxin Detail
PD885_RS20110 ()12669..13067+399WP_108772809.1antitoxin VbhA family protein-
PD885_RS20115 ()13109..13672+564WP_108772810.1Tn3 family transposase TnpR_ISAzs17Transposase
PD885_RS20120 ()13715..13990+276Protein_18ParA family protein-
PD885_RS20125 ()13992..14420-429WP_002804319.1DUF3757 domain-containing protein-
Showing 1 to 20 of 42 rows
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Similar MGE(s)

Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.

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Detail
Organism
MGE type
Related TA
Genome accession
Coordinates
Mash
distance
No matching records found