MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 39521 bp
Accession: NZ_LT630450 Location: 2627314..2666834 Organism: Desulfovibrio piger strain FI11049 isolate FI11049 Replicon: chromosome
Accession: NZ_LT630450 Location: 2627314..2666834 Organism: Desulfovibrio piger strain FI11049 isolate FI11049 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| DESPIGER_RS11660 () | 2622843..2623580 | + | 738 | WP_072337161.1 | sulfite exporter TauE/SafE family protein | - |
| DESPIGER_RS11670 () | 2623875..2624963 | - | 1089 | WP_072337163.1 | site-specific integrase | - |
| DESPIGER_RS13025 () | 2625232..2625564 | - | 333 | WP_072337165.1 | hypothetical protein | - |
| DESPIGER_RS12700 () | 2625906..2626672 | + | 767 | WP_156831586.1 | IS5 family transposase | - |
| DESPIGER_RS11695 () | 2626948..2627184 | + | 237 | WP_072337169.1 | hypothetical protein | - |
| DESPIGER_RS13030 () | 2627129..2627680 | - | 552 | WP_162273865.1 | IS5 family transposase | - |
| DESPIGER_RS13100 () | 2627580..2627942 | - | 363 | WP_083575399.1 | transposase | - |
| DESPIGER_RS11705 () | 2628796..2629134 | - | 339 | WP_072337171.1 | hypothetical protein | - |
| DESPIGER_RS11710 () | 2629335..2629712 | + | 378 | WP_072337173.1 | hypothetical protein | - |
| DESPIGER_RS11715 () | 2629675..2631927 | + | 2253 | WP_072337174.1 | relaxase/mobilization nuclease domain-containing protein | - |
| DESPIGER_RS11720 () | 2632045..2638377 | - | 6333 | WP_083575449.1 | DEAD/DEAH box helicase family protein | - |
| DESPIGER_RS12715 () | 2638771..2638944 | - | 174 | WP_083575400.1 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | - |
| DESPIGER_RS11740 () | 2639040..2639795 | - | 756 | WP_156831704.1 | hypothetical protein | - |
| DESPIGER_RS11745 () | 2639884..2640141 | + | 258 | WP_072337184.1 | antitoxin | Antitoxin Detail |
| DESPIGER_RS11750 () | 2640141..2640473 | + | 333 | WP_072337186.1 | type II toxin-antitoxin system PemK/MazF family toxin | Toxin Detail |
| DESPIGER_RS11755 () | 2640490..2642265 | - | 1776 | WP_072337187.1 | hypothetical protein | VF |
| DESPIGER_RS11760 () | 2642273..2643592 | - | 1320 | WP_072337189.1 | hypothetical protein | - |
| DESPIGER_RS11765 () | 2643589..2644101 | - | 513 | WP_083575402.1 | hypothetical protein | VF |
| DESPIGER_RS11770 () | 2644098..2644514 | - | 417 | WP_072337191.1 | hypothetical protein | - |
| DESPIGER_RS11775 () | 2644511..2646640 | - | 2130 | WP_072337192.1 | DNA topoisomerase 3 | - |
| DESPIGER_RS11780 () | 2646644..2648068 | - | 1425 | WP_072337194.1 | DUF1738 domain-containing protein | - |
| DESPIGER_RS11785 () | 2648065..2648280 | - | 216 | WP_072337195.1 | hypothetical protein | - |
| DESPIGER_RS11790 () | 2648306..2648578 | - | 273 | WP_072337197.1 | hypothetical protein | VF |
| DESPIGER_RS11795 () | 2648575..2649750 | - | 1176 | WP_072337199.1 | hypothetical protein | VF |
| DESPIGER_RS11800 () | 2649747..2650793 | - | 1047 | WP_072337201.1 | type IV secretory system conjugative DNA transfer family protein | - |
| DESPIGER_RS11805 () | 2650790..2651260 | - | 471 | WP_072337203.1 | DotD/TraH family lipoprotein | - |
| DESPIGER_RS11810 () | 2651303..2651746 | - | 444 | WP_072337205.1 | hypothetical protein | - |
| DESPIGER_RS11815 () | 2651752..2653851 | - | 2100 | WP_072337207.1 | DotA/TraY family protein | - |
| DESPIGER_RS11820 () | 2653934..2654194 | + | 261 | WP_072337209.1 | type II toxin-antitoxin system RelB/DinJ family antitoxin | Antitoxin Detail |
| DESPIGER_RS11825 () | 2654195..2654467 | + | 273 | WP_072337211.1 | type II toxin-antitoxin system mRNA interferase toxin, RelE/StbE family | Toxin Detail |
| DESPIGER_RS11830 () | 2654486..2655586 | - | 1101 | WP_072337213.1 | hypothetical protein | - |
| DESPIGER_RS11840 () | 2658561..2659271 | - | 711 | WP_072337217.1 | hypothetical protein | VF |
| DESPIGER_RS11845 () | 2659290..2659679 | - | 390 | WP_072337219.1 | hypothetical protein | - |
| DESPIGER_RS11850 () | 2659694..2660200 | - | 507 | WP_072337221.1 | hypothetical protein | VF |
| DESPIGER_RS11855 () | 2660205..2661311 | - | 1107 | WP_072337223.1 | hypothetical protein | VF |
| DESPIGER_RS11860 () | 2661321..2662316 | - | 996 | WP_072337225.1 | hypothetical protein | - |
| DESPIGER_RS11865 () | 2662326..2663444 | - | 1119 | WP_083575404.1 | helix-turn-helix domain-containing protein | - |
| DESPIGER_RS11870 () | 2664416..2665627 | + | 1212 | WP_072337229.1 | Prophage integrase IntA ; Integrase | Integrase |
| DESPIGER_RS13145 () | 2665624..2665791 | + | 168 | WP_173783295.1 | hypothetical protein | - |
| DESPIGER_RS11875 () | 2665963..2666868 | + | 906 | WP_072337231.1 | hypothetical protein | - |
| DESPIGER_RS11880 () | 2666993..2667211 | + | 219 | WP_072337233.1 | AlpA family phage regulatory protein | - |
| DESPIGER_RS11885 () | 2667204..2668985 | + | 1782 | WP_072337235.1 | AAA family ATPase | - |
| DESPIGER_RS11890 () | 2669187..2670374 | + | 1188 | WP_072337237.1 | plasmid recombination protein | - |
| DESPIGER_RS11895 () | 2670522..2670803 | + | 282 | Protein_2286 | protein MobC | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|