MGE detailed information
MGE type: Genomic_island MGE length: 9351 bp
Accession: NZ_LT615378 Location: 4349058..4358408 Organism: Escherichia coli isolate 103 Replicon: chromosome
Accession: NZ_LT615378 Location: 4349058..4358408 Organism: Escherichia coli isolate 103 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| BV310_RS22920 () | 4345789..4346508 | - | 720 | WP_000611288.1 | two-component system response regulator DcuR | - |
| BV310_RS22925 () | 4346505..4348136 | - | 1632 | WP_001216477.1 | sensor histidine kinase | - |
| BV310_RS22930 () | 4348317..4348547 | + | 231 | WP_000371704.1 | (4Fe-4S)-binding protein | - |
| BV310_RS22935 () | 4348559..4348831 | + | 273 | WP_000405651.1 | N-acetyltransferase | - |
| BV310_RS22945 () | 4349058..4349354 | + | 297 | WP_000398619.1 | type V toxin-antitoxin system endoribonuclease antitoxin GhoS | Antitoxin Detail |
| BV310_RS22950 () | 4349382..4349555 | + | 174 | WP_001173343.1 | type V toxin-antitoxin system toxin GhoT | Toxin Detail |
| BV310_RS22955 () | 4349674..4351191 | - | 1518 | WP_001295074.1 | lysine--tRNA ligase | - |
| BV310_RS22960 () | 4351428..4352885 | - | 1458 | WP_000856829.1 | dipeptide/tripeptide permease DtpC | - |
| BV310_RS22965 () | 4352944..4355091 | - | 2148 | WP_001295383.1 | lysine decarboxylase CadA | - |
| BV310_RS22970 () | 4355171..4356505 | - | 1335 | WP_000092909.1 | cadaverine/lysine antiporter | - |
| BV310_RS22975 () | 4356870..4358408 | - | 1539 | WP_001187173.1 | lysine decarboxylation/transport transcriptional activator CadC | - |
| BV310_RS22990 () | 4359207..4359782 | - | 576 | WP_001188520.1 | transcriptional regulator | - |
| BV310_RS22995 () | 4359819..4361516 | - | 1698 | WP_000068922.1 | protein-disulfide reductase DsbD | - |
| BV310_RS23000 () | 4361492..4361830 | - | 339 | WP_000883400.1 | divalent cation tolerance protein CutA | - |
| BV310_RS23005 () | 4361946..4363247 | - | 1302 | WP_000961959.1 | anaerobic C4-dicarboxylate transporter DcuA | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli str. K-12 substr. MC4100 | Genomic island | TA20087 | HG738867 | 4238430..4247780 | 0 | |
| Escherichia coli str. K-12 substr. W3110 | Genomic island | TA21458 | NC_007779 | 4357262..4366612 | 0 | |
| Escherichia coli BW2952 | Genomic island | TA23874 | NC_012759 | 4289342..4298692 | 0 | |
| Escherichia coli str. K-12 substr. W3110 strain K-12 substr. ZK126 | Genomic island | TA68443 | NZ_CP017979 | 4248154..4261393 | 0.009 | |
| Escherichia coli str. K-12 substr. MC4100 strain K-12 | Genomic island | TA285032 | NZ_HG738867 | 4238430..4247780 | 0 |