MGE detailed information
MGE type: Conjugative plasmid MGE length: 102557 bp
Accession: NZ_LS999562 Location: 1..102557 Organism: Escherichia coli isolate EC-TO143 Replicon: plasmid 3
Accession: NZ_LS999562 Location: 1..102557 Organism: Escherichia coli isolate EC-TO143 Replicon: plasmid 3
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ECTO143_RS25805 () | 1087..1743 | - | 657 | WP_001193553.1 | hypothetical protein | VF |
| ECTO143_RS25810 () | 1728..2288 | - | 561 | WP_000014116.1 | hypothetical protein | VF |
| ECTO143_RS25815 () | 2298..2912 | - | 615 | WP_000959785.1 | hypothetical protein | VF |
| ECTO143_RS25820 () | 2930..4027 | - | 1098 | WP_001208805.1 | Toxin coregulated pilus biosynthesis protein E | VF |
| ECTO143_RS25825 () | 4040..5593 | - | 1554 | WP_000362202.1 | Toxin coregulated pilus biosynthesis protein T | VF |
| ECTO143_RS25830 () | 5604..6056 | - | 453 | WP_001247336.1 | hypothetical protein | VF |
| ECTO143_RS25835 () | 6043..7338 | - | 1296 | WP_021560540.1 | hypothetical protein | VF |
| ECTO143_RS25840 () | 7331..9013 | - | 1683 | WP_096949736.1 | Outer membrane lipoprotein BfpB | VF |
| ECTO143_RS25845 () | 9027..9464 | - | 438 | WP_000539807.1 | hypothetical protein | VF |
| ECTO143_RS25850 () | 9464..10531 | - | 1068 | WP_001302629.1 | hypothetical protein | VF |
| ECTO143_RS25860 () | 11205..11657 | - | 453 | WP_000008894.1 | hypothetical protein | - |
| ECTO143_RS25865 () | 11700..11954 | - | 255 | WP_001136192.1 | PilI type IV pilus biogenesis protein | - |
| ECTO143_RS25875 () | 12116..12667 | - | 552 | WP_000744644.1 | hypothetical protein | - |
| ECTO143_RS25880 () | 12840..13523 | - | 684 | WP_000213859.1 | conjugal transfer protein TraC | - |
| ECTO143_RS25885 () | 13776..14309 | - | 534 | WP_001306770.1 | transcription termination factor NusG | - |
| ECTO143_RS25895 () | 14751..15038 | - | 288 | WP_000074849.1 | conjugal transfer protein TraA | - |
| ECTO143_RS25900 () | 14956..15219 | - | 264 | WP_001324596.1 | ash family protein | - |
| ECTO143_RS25915 () | 16192..17223 | + | 1032 | WP_000907863.1 | replication initiation protein | - |
| ECTO143_RS25930 () | 18292..18801 | - | 510 | WP_032330250.1 | hypothetical protein | - |
| ECTO143_RS25935 () | 18857..19459 | - | 603 | WP_000517692.1 | hypothetical protein | - |
| ECTO143_RS25945 () | 19813..21159 | + | 1347 | WP_096949734.1 | hypothetical protein | - |
| ECTO143_RS25955 () | 21438..23318 | + | 1881 | WP_052971876.1 | colicin | - |
| ECTO143_RS25960 () | 23340..23675 | - | 336 | WP_001080734.1 | colicin 1A immunity protein | - |
| ECTO143_RS25965 () | 23804..24055 | + | 252 | Protein_24 | hypothetical protein | - |
| ECTO143_RS25970 () | 24069..24401 | + | 333 | WP_064754192.1 | WbuC family cupin fold metalloprotein | - |
| ECTO143_RS25975 () | 24448..25323 | - | 876 | WP_013188473.1 | Beta-lactamase CTX-M-1 | ARG |
| ECTO143_RS25980 () | 25611..26873 | - | 1263 | WP_000608644.1 | IS1380 family transposase ISEcp1 | Transposase |
| ECTO143_RS25985 () | 27179..27769 | - | 591 | WP_000194576.1 | hypothetical protein | - |
| ECTO143_RS25990 () | 27769..28026 | - | 258 | WP_000343085.1 | hypothetical protein | - |
| ECTO143_RS26000 () | 28594..29007 | + | 414 | WP_032330007.1 | hypothetical protein | - |
| ECTO143_RS26005 () | 29009..29788 | + | 780 | WP_032330009.1 | site-specific integrase | - |
| ECTO143_RS26010 () | 29968..30612 | + | 645 | WP_001144036.1 | ParA family protein | - |
| ECTO143_RS26015 () | 30699..31007 | + | 309 | WP_000030199.1 | hypothetical protein | - |
| ECTO143_RS26020 () | 31421..32401 | + | 981 | WP_000688514.1 | plasmid segregation protein ParM | - |
| ECTO143_RS26025 () | 32394..32810 | + | 417 | WP_001278818.1 | plasmid partitioning/stability family protein | - |
| ECTO143_RS26030 () | 32812..34086 | - | 1275 | WP_000457524.1 | Y-family DNA polymerase | - |
| ECTO143_RS26035 () | 34086..34523 | - | 438 | WP_000109071.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| ECTO143_RS26040 () | 34520..34768 | - | 249 | WP_000618110.1 | DinI-like family protein | - |
| ECTO143_RS26050 () | 35186..36088 | + | 903 | WP_134089490.1 | DUF1281 domain-containing protein | - |
| ECTO143_RS26055 () | 36085..36396 | + | 312 | WP_031942433.1 | hypothetical protein | - |
| ECTO143_RS26060 () | 36472..37155 | + | 684 | WP_000086147.1 | DNA methylase | - |
| ECTO143_RS26065 () | 37156..37377 | + | 222 | WP_001104881.1 | hypothetical protein | - |
| ECTO143_RS26070 () | 37391..37825 | + | 435 | WP_000274500.1 | DUF1380 family protein | - |
| ECTO143_RS27240 () | 37871..38647 | + | 777 | WP_032330368.1 | hypothetical protein | - |
| ECTO143_RS26085 () | 39188..39490 | + | 303 | WP_001671341.1 | antirestriction protein | - |
| ECTO143_RS26090 () | 39537..39959 | + | 423 | WP_000271763.1 | DUF1380 family protein | - |
| ECTO143_RS26095 () | 39956..40147 | + | 192 | WP_001027493.1 | hypothetical protein | - |
| ECTO143_RS27245 () | 40481..40549 | - | 69 | Protein_48 | pilus protein | - |
| ECTO143_RS26110 () | 40918..41445 | + | 528 | WP_001276114.1 | single-stranded DNA-binding protein | - |
| ECTO143_RS26115 () | 41503..41736 | + | 234 | WP_000006012.1 | DUF905 family protein | - |
| ECTO143_RS26120 () | 41795..43753 | + | 1959 | WP_032329756.1 | ParB/RepB/Spo0J family partition protein | - |
| ECTO143_RS26125 () | 43808..44242 | + | 435 | WP_000845897.1 | conjugation system SOS inhibitor PsiB | - |
| ECTO143_RS26130 () | 44239..44958 | + | 720 | WP_001276263.1 | plasmid SOS inhibition protein A | - |
| ECTO143_RS26135 () | 44955..45551 | + | 597 | WP_000978012.1 | hypothetical protein | - |
| ECTO143_RS26145 () | 46014..46514 | + | 501 | WP_000117622.1 | antirestriction protein ArdA | - |
| ECTO143_RS26155 () | 47250..47684 | + | 435 | WP_000218863.1 | hypothetical protein | - |
| ECTO143_RS26160 () | 47776..48042 | + | 267 | WP_001247862.1 | hypothetical protein | - |
| ECTO143_RS26165 () | 48107..49045 | + | 939 | WP_000038336.1 | Recombination-promoting nuclease RpnA | VF |
| ECTO143_RS26170 () | 49045..49290 | + | 246 | WP_001260884.1 | hypothetical protein | - |
| ECTO143_RS26175 () | 49321..49572 | - | 252 | WP_000148286.1 | helix-turn-helix domain-containing protein | - |
| ECTO143_RS27250 () | 49606..49803 | - | 198 | WP_024129998.1 | hypothetical protein | - |
| ECTO143_RS26190 () | 50152..51000 | + | 849 | WP_001077033.1 | DUF4942 domain-containing protein | - |
| ECTO143_RS26195 () | 51086..51421 | - | 336 | WP_000157095.1 | molybdopterin-guanine dinucleotide biosynthesis protein MobC | - |
| ECTO143_RS26200 () | 51655..51987 | + | 333 | WP_001283947.1 | IncI1-type relaxosome accessory protein NikA | - |
| ECTO143_RS26205 () | 51998..54697 | + | 2700 | WP_032329268.1 | Protein TraI | Relaxase |
| ECTO143_RS26210 () | 54734..57025 | - | 2292 | WP_001289276.1 | hypothetical protein | - |
| ECTO143_RS26215 () | 57018..58088 | - | 1071 | WP_000151583.1 | IncI1-type conjugal transfer protein TrbB | - |
| ECTO143_RS26220 () | 58107..59315 | - | 1209 | WP_016245570.1 | IncI1-type conjugal transfer protein TrbA | - |
| - () | 59495..59552 | - | 58 | NuclAT_1 | - | Antitoxin Detail |
| - () | 59495..59552 | - | 58 | NuclAT_1 | - | Antitoxin Detail |
| - () | 59495..59552 | - | 58 | NuclAT_1 | - | Antitoxin Detail |
| - () | 59495..59552 | - | 58 | NuclAT_1 | - | Antitoxin Detail |
| ECTO143_RS26225 () | 59607..59759 | + | 153 | WP_001331364.1 | Hok/Gef family protein | Toxin Detail |
| ECTO143_RS26230 () | 59831..60082 | - | 252 | WP_032329894.1 | hypothetical protein | - |
| ECTO143_RS27080 () | 60741..60917 | - | 177 | WP_001054897.1 | hypothetical protein | - |
| ECTO143_RS26235 () | 61309..61518 | + | 210 | WP_000062603.1 | HEAT repeat domain-containing protein | - |
| ECTO143_RS26240 () | 61590..62240 | - | 651 | WP_001178506.1 | plasmid IncI1-type surface exclusion protein ExcA | - |
| ECTO143_RS26245 () | 62314..64415 | - | 2102 | Protein_74 | DotA/TraY family protein | - |
| ECTO143_RS26250 () | 64518..64721 | - | 204 | Protein_75 | hypothetical protein | - |
| ECTO143_RS26255 () | 64721..65198 | + | 478 | Protein_76 | DUF4942 domain-containing protein | - |
| ECTO143_RS26260 () | 65283..65617 | - | 335 | Protein_77 | molybdopterin-guanine dinucleotide biosynthesis protein MobC | - |
| ECTO143_RS26265 () | 65851..66183 | + | 333 | WP_001283947.1 | IncI1-type relaxosome accessory protein NikA | - |
| ECTO143_RS26270 () | 66194..68892 | + | 2699 | Protein_79 | hypothetical protein | Relaxase |
| ECTO143_RS26275 () | 68929..71220 | - | 2292 | WP_001289276.1 | hypothetical protein | - |
| ECTO143_RS26280 () | 71213..72283 | - | 1071 | WP_000151583.1 | IncI1-type conjugal transfer protein TrbB | - |
| ECTO143_RS26285 () | 72302..73510 | - | 1209 | WP_016245570.1 | IncI1-type conjugal transfer protein TrbA | - |
| - () | 73690..73747 | - | 58 | NuclAT_0 | - | Antitoxin Detail |
| - () | 73690..73747 | - | 58 | NuclAT_0 | - | Antitoxin Detail |
| - () | 73690..73747 | - | 58 | NuclAT_0 | - | Antitoxin Detail |
| - () | 73690..73747 | - | 58 | NuclAT_0 | - | Antitoxin Detail |
| ECTO143_RS26290 () | 73802..73954 | + | 153 | WP_001331364.1 | Hok/Gef family protein | Toxin Detail |
| ECTO143_RS26295 () | 74026..74277 | - | 252 | WP_032329894.1 | hypothetical protein | - |
| ECTO143_RS27085 () | 74936..75112 | - | 177 | WP_001054897.1 | hypothetical protein | - |
| ECTO143_RS26300 () | 75504..75713 | + | 210 | WP_000062603.1 | HEAT repeat domain-containing protein | - |
| ECTO143_RS26305 () | 75785..76435 | - | 651 | WP_001178506.1 | plasmid IncI1-type surface exclusion protein ExcA | - |
| ECTO143_RS26310 () | 76509..78677 | - | 2169 | WP_000698357.1 | DotA/TraY family protein | - |
| ECTO143_RS26315 () | 78774..79358 | - | 585 | WP_001037982.1 | IncI1-type conjugal transfer protein TraX | - |
| ECTO143_RS26320 () | 79387..80589 | - | 1203 | WP_001189160.1 | IncI1-type conjugal transfer protein TraW | - |
| ECTO143_RS26325 () | 80556..81170 | - | 615 | WP_000337399.1 | IncI1-type conjugal transfer protein TraV | - |
| ECTO143_RS26330 () | 81170..84214 | - | 3045 | WP_001024782.1 | IncI1-type conjugal transfer protein TraU | - |
| ECTO143_RS26335 () | 84304..85104 | - | 801 | WP_001164788.1 | IncI1-type conjugal transfer protein TraT | - |
| ECTO143_RS26340 () | 85088..85276 | - | 189 | WP_001277255.1 | putative conjugal transfer protein TraS | - |
| ECTO143_RS26345 () | 85340..85744 | - | 405 | WP_000086959.1 | IncI1-type conjugal transfer protein TraR | - |
| ECTO143_RS26350 () | 85795..86322 | - | 528 | WP_001055569.1 | conjugal transfer protein TraQ | - |
| ECTO143_RS26355 () | 86322..87026 | - | 705 | WP_000801919.1 | IncI1-type conjugal transfer protein TraP | - |
| ECTO143_RS26360 () | 87026..88315 | - | 1290 | WP_032330003.1 | conjugal transfer protein TraO | - |
| ECTO143_RS26365 () | 88318..89301 | - | 984 | WP_001191877.1 | hypothetical protein | VF |
| ECTO143_RS26370 () | 89312..90004 | - | 693 | WP_000138550.1 | DotI/IcmL family type IV secretion protein | - |
| ECTO143_RS26375 () | 90001..90348 | - | 348 | WP_001055900.1 | conjugal transfer protein | - |
| ECTO143_RS26380 () | 90366..94133 | - | 3768 | WP_096949733.1 | DNA primase | - |
| ECTO143_RS26385 () | 94223..94774 | - | 552 | WP_000014583.1 | Phospholipase D | VF |
| ECTO143_RS26390 () | 94789..95079 | - | 291 | WP_001299214.1 | hypothetical protein | - |
| ECTO143_RS26395 () | 95076..96224 | - | 1149 | WP_001024972.1 | putative protein YggR | VF |
| ECTO143_RS26400 () | 96221..97039 | - | 819 | WP_000646098.1 | hypothetical protein | VF |
| ECTO143_RS26405 () | 97036..97494 | - | 459 | WP_001079808.1 | hypothetical protein | VF |
| ECTO143_RS26410 () | 97889..98473 | - | 585 | WP_000977522.1 | histidine phosphatase family protein | - |
| ECTO143_RS26415 () | 98533..99735 | - | 1203 | WP_000976351.1 | conjugal transfer protein TraF | - |
| ECTO143_RS26420 () | 99820..100644 | - | 825 | WP_001238939.1 | hypothetical protein | - |
| ECTO143_RS26425 () | 100795..101949 | - | 1155 | WP_001139957.1 | integrase | - |
| ECTO143_RS27255 () | 101933..102058 | + | 126 | Protein_112 | prepilin, shufflon protein A | - |
| ECTO143_RS27260 () | 102107..102355 | + | 249 | WP_001349157.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|