MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 89538 bp
Accession: NZ_LS483450 Location: 1020982..1110519 Organism: Streptococcus pneumoniae strain 4041STDY6583227 Replicon: chromosome
Accession: NZ_LS483450 Location: 1020982..1110519 Organism: Streptococcus pneumoniae strain 4041STDY6583227 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| DQL12_RS05475 () | 1016393..1017793 | - | 1401 | WP_050087403.1 | 6-phospho-beta-galactosidase | - |
| DQL12_RS05480 () | 1018096..1019076 | - | 981 | WP_001229140.1 | tagatose-bisphosphate aldolase | - |
| DQL12_RS05485 () | 1019078..1020007 | - | 930 | WP_000604272.1 | tagatose-6-phosphate kinase | - |
| DQL12_RS05490 () | 1020018..1020533 | - | 516 | WP_001216910.1 | galactose-6-phosphate isomerase subunit LacB | - |
| DQL12_RS05495 () | 1020564..1020989 | - | 426 | WP_000029272.1 | galactose-6-phosphate isomerase subunit LacA | - |
| DQL12_RS05500 () | 1021146..1021610 | - | 465 | WP_078132258.1 | aldose epimerase | - |
| DQL12_RS05515 () | 1022844..1023704 | - | 861 | WP_000631543.1 | methionyl aminopeptidase | - |
| DQL12_RS05520 () | 1023720..1024997 | - | 1278 | WP_000033830.1 | CBS-HotDog domain-containing transcription factor SpxR | - |
| DQL12_RS05525 () | 1024990..1025541 | - | 552 | WP_050255672.1 | GNAT family N-acetyltransferase | - |
| DQL12_RS05530 () | 1025557..1026816 | - | 1260 | WP_001227083.1 | UDP-N-acetylglucosamine 1-carboxyvinyltransferase | - |
| DQL12_RS05535 () | 1028018..1028625 | + | 608 | Protein_1021 | ISL3 family transposase IS1167 | Transposase |
| DQL12_RS05545 () | 1028817..1030163 | - | 1347 | WP_001808790.1 | IS1380 family transposase ISSpn5 | Transposase |
| DQL12_RS05550 () | 1030328..1031052 | + | 725 | Protein_1023 | ISL3 family transposase IS1167 | Transposase |
| DQL12_RS05555 () | 1031104..1031262 | - | 159 | WP_001808548.1 | hypothetical protein | - |
| DQL12_RS05560 () | 1031272..1032582 | - | 1311 | WP_050255698.1 | GTPase ObgE | - |
| DQL12_RS05565 () | 1032646..1032780 | - | 135 | WP_000863859.1 | DUF4044 domain-containing protein | - |
| DQL12_RS05570 () | 1032839..1033015 | - | 177 | WP_001256251.1 | PspC domain-containing protein | - |
| DQL12_RS05575 () | 1033046..1034371 | - | 1326 | WP_001219434.1 | glycosyltransferase family 4 protein | - |
| DQL12_RS05580 () | 1034387..1035430 | - | 1044 | WP_000412279.1 | alpha-galactosylglucosyldiacylglycerol synthase | - |
| DQL12_RS05585 () | 1035545..1035874 | - | 330 | WP_000331928.1 | metal-sulfur cluster assembly factor | - |
| DQL12_RS05590 () | 1035888..1036997 | - | 1110 | WP_000201898.1 | RNA polymerase sigma factor RpoD | - |
| DQL12_RS05595 () | 1037000..1038760 | - | 1761 | WP_050255697.1 | DNA primase | - |
| DQL12_RS05600 () | 1038850..1039608 | - | 759 | WP_000125401.1 | ABC transporter ATP-binding protein | - |
| DQL12_RS05605 () | 1039605..1040471 | - | 867 | WP_000637234.1 | ABC transporter permease | - |
| DQL12_RS05610 () | 1040540..1041544 | - | 1005 | WP_000792155.1 | hypothetical protein | VF |
| DQL12_RS05615 () | 1041957..1044653 | - | 2697 | WP_000058147.1 | phosphoenolpyruvate carboxylase | - |
| DQL12_RS05620 () | 1044673..1045902 | - | 1230 | WP_000703361.1 | FtsW/RodA/SpoVE family cell cycle protein | - |
| DQL12_RS05625 () | 1046030..1046283 | - | 254 | Protein_1038 | transposase family protein | - |
| DQL12_RS05630 () | 1046459..1046737 | - | 279 | WP_000416471.1 | aminoglycoside phosphotransferase | - |
| DQL12_RS05635 () | 1046988..1047575 | - | 588 | WP_172448677.1 | Type 1 glutamine amidotransferase-like domain-containing protein | - |
| DQL12_RS05640 () | 1047680..1049473 | - | 1794 | WP_000740021.1 | hypothetical protein ; Integrase | Integrase |
| DQL12_RS11810 () | 1049640..1049792 | - | 153 | WP_001812617.1 | hypothetical protein | - |
| DQL12_RS05645 () | 1050092..1051438 | + | 1347 | WP_001808790.1 | IS1380 family transposase ISSpn5 | Transposase |
| DQL12_RS05650 () | 1051631..1051834 | - | 204 | WP_000275922.1 | helix-turn-helix transcriptional regulator | - |
| DQL12_RS05655 () | 1052336..1053531 | + | 1196 | Protein_1045 | IS110 family transposase | - |
| DQL12_RS05660 () | 1053910..1054695 | - | 786 | WP_050213898.1 | ABC transporter permease | - |
| DQL12_RS05665 () | 1054697..1055514 | - | 818 | Protein_1047 | ABC-2 family transporter protein | - |
| DQL12_RS05670 () | 1055516..1056508 | - | 993 | Protein_1048 | hypothetical protein | VF |
| DQL12_RS05675 () | 1057525..1058318 | - | 794 | Protein_1049 | tyrosine-protein phosphatase | - |
| DQL12_RS05680 () | 1058418..1060055 | - | 1638 | WP_000021543.1 | methionine--tRNA ligase | - |
| DQL12_RS05685 () | 1060123..1060797 | - | 675 | WP_000903082.1 | chloramphenicol acetyltransferase | - |
| DQL12_RS11935 () | 1060856..1061259 | - | 404 | Protein_1052 | hypothetical protein | - |
| DQL12_RS05695 () | 1061643..1062596 | + | 954 | WP_050255693.1 | IS30 family transposase ISSpn8 | Transposase |
| DQL12_RS05700 () | 1062917..1063051 | + | 135 | Protein_1054 | transposase family protein | - |
| DQL12_RS05705 () | 1063289..1064721 | - | 1433 | Protein_1055 | IS1182 family transposase | - |
| DQL12_RS05710 () | 1064977..1066827 | - | 1851 | WP_001865166.1 | relaxase/mobilization nuclease domain-containing protein | - |
| DQL12_RS05715 () | 1066814..1067179 | - | 366 | WP_000263054.1 | MobC family plasmid mobilization relaxosome protein | - |
| DQL12_RS05720 () | 1067189..1067548 | - | 360 | WP_000003750.1 | hypothetical protein | - |
| DQL12_RS05725 () | 1068367..1068819 | - | 453 | WP_001808559.1 | hypothetical protein | - |
| DQL12_RS05730 () | 1068747..1069523 | - | 777 | Protein_1060 | hypothetical protein | - |
| DQL12_RS05735 () | 1069551..1070312 | - | 762 | WP_050255691.1 | zeta toxin family protein | Toxin Detail |
| DQL12_RS05740 () | 1070312..1070788 | - | 477 | WP_000579613.1 | helix-turn-helix domain-containing protein | Antitoxin Detail |
| DQL12_RS05745 () | 1071233..1071688 | - | 456 | WP_000500474.1 | hypothetical protein | - |
| DQL12_RS05750 () | 1071963..1072787 | - | 825 | Protein_1064 | alpha-glycosidase | - |
| DQL12_RS05755 () | 1072991..1073914 | + | 924 | WP_000417606.1 | protein rep | - |
| DQL12_RS05765 () | 1074710..1075429 | - | 720 | Protein_1066 | hypothetical protein | ARG |
| DQL12_RS05770 () | 1075600..1075848 | - | 249 | WP_001814254.1 | hypothetical protein | - |
| DQL12_RS05775 () | 1076087..1076875 | - | 789 | WP_000214003.1 | hypothetical protein | - |
| DQL12_RS05780 () | 1077351..1078109 | - | 759 | WP_000405369.1 | zeta toxin family protein | Toxin Detail |
| DQL12_RS05785 () | 1078109..1078585 | - | 477 | WP_000579623.1 | helix-turn-helix domain-containing protein | Antitoxin Detail |
| DQL12_RS05790 () | 1078653..1078925 | - | 273 | WP_000495438.1 | hypothetical protein | - |
| DQL12_RS05795 () | 1078963..1079346 | - | 384 | WP_002933294.1 | hypothetical protein | - |
| DQL12_RS05800 () | 1079343..1079576 | - | 234 | WP_000152419.1 | hypothetical protein | - |
| DQL12_RS05805 () | 1079627..1080712 | - | 1086 | WP_001019160.1 | toprim domain-containing protein | - |
| DQL12_RS05810 () | 1080722..1081363 | - | 642 | WP_000933082.1 | hypothetical protein | - |
| DQL12_RS05815 () | 1081523..1081720 | + | 198 | WP_004249782.1 | hypothetical protein | - |
| DQL12_RS05820 () | 1081734..1082030 | - | 297 | WP_000998891.1 | hypothetical protein | - |
| DQL12_RS05825 () | 1082044..1082328 | - | 285 | WP_000969641.1 | hypothetical protein | - |
| DQL12_RS05830 () | 1082403..1088636 | - | 6234 | WP_050255543.1 | DEAD/DEAH box helicase family protein | - |
| DQL12_RS05835 () | 1088669..1089079 | - | 411 | WP_000387507.1 | thrombospondin type 3 repeat-containing protein | - |
| DQL12_RS05840 () | 1089510..1090202 | - | 693 | WP_001841476.1 | hypothetical protein | - |
| DQL12_RS05845 () | 1090243..1090827 | - | 585 | WP_050255544.1 | FtsX-like permease family protein | - |
| DQL12_RS05850 () | 1090845..1091576 | - | 732 | WP_000247939.1 | hypothetical protein | VF |
| DQL12_RS05860 () | 1092462..1093679 | - | 1218 | WP_050255545.1 | hypothetical protein ; Integrase | Integrase |
| DQL12_RS05865 () | 1093761..1093964 | - | 204 | WP_000814512.1 | excisionase | - |
| DQL12_RS05875 () | 1094421..1094651 | - | 231 | WP_000857133.1 | helix-turn-helix domain-containing protein | - |
| DQL12_RS05880 () | 1094648..1095070 | - | 423 | WP_000804599.1 | sigma-70 family RNA polymerase sigma factor | - |
| DQL12_RS05885 () | 1095575..1095928 | + | 354 | WP_001227347.1 | helix-turn-helix transcriptional regulator | - |
| DQL12_RS05890 () | 1095988..1096155 | - | 168 | WP_000336323.1 | cysteine-rich KTR domain-containing protein | - |
| DQL12_RS05895 () | 1096274..1098193 | - | 1920 | WP_050237755.1 | hypothetical protein | VF |
| DQL12_RS05900 () | 1098209..1098325 | - | 117 | WP_001814923.1 | tetracycline resistance determinant leader peptide | - |
| DQL12_RS05905 () | 1098570..1099484 | - | 915 | WP_002345006.1 | conjugal transfer protein | - |
| DQL12_RS05910 () | 1099499..1100500 | - | 1002 | WP_020224359.1 | hypothetical protein | VF |
| DQL12_RS05915 () | 1100497..1102680 | - | 2184 | WP_050237754.1 | hypothetical protein | - |
| DQL12_RS05920 () | 1102683..1105130 | - | 2448 | WP_000331160.1 | ATP-binding protein | - |
| DQL12_RS05925 () | 1105114..1105620 | - | 507 | WP_000506270.1 | conjugal transfer protein | - |
| DQL12_RS05930 () | 1105595..1106092 | - | 498 | WP_000342539.1 | antirestriction protein ArdA | - |
| DQL12_RS05935 () | 1106209..1106430 | - | 222 | WP_001009056.1 | hypothetical protein | - |
| DQL12_RS05940 () | 1106473..1107678 | - | 1206 | WP_000398284.1 | replication initiation factor domain-containing protein | - |
| DQL12_RS05945 () | 1107701..1107853 | - | 153 | WP_000879507.1 | hypothetical protein | - |
| DQL12_RS05950 () | 1107856..1109241 | - | 1386 | WP_000813488.1 | DNA translocase FtsK | - |
| DQL12_RS05955 () | 1109270..1109656 | - | 387 | WP_000985015.1 | YdcP family protein | - |
| DQL12_RS05960 () | 1109672..1109986 | - | 315 | WP_000420682.1 | YdcP family protein | - |
| DQL12_RS05975 () | 1110554..1113367 | - | 2814 | WP_050255546.1 | CHAP domain-containing protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|