MGE detailed information
MGE type: Genomic_island MGE length: 32762 bp
Accession: NZ_LS483390 Location: 921609..954370 Organism: Streptococcus pneumoniae strain NCTC13276 Replicon: chromosome
Accession: NZ_LS483390 Location: 921609..954370 Organism: Streptococcus pneumoniae strain NCTC13276 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| DQM93_RS04865 () | 916893..917507 | + | 615 | WP_000476388.1 | cell wall hydrolase Pmp23 | - |
| DQM93_RS04870 () | 917581..918555 | + | 975 | WP_001227739.1 | DUF1002 domain-containing protein | - |
| DQM93_RS04875 () | 918629..920260 | + | 1632 | WP_000914581.1 | 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD | - |
| DQM93_RS04880 () | 920474..920752 | + | 279 | WP_000710803.1 | hypothetical protein | - |
| DQM93_RS04885 () | 920998..921216 | + | 219 | WP_000885335.1 | helix-turn-helix transcriptional regulator | - |
| DQM93_RS04895 () | 921609..922634 | + | 1026 | WP_000790743.1 | iron-siderophore ABC transporter substrate-binding protein | - |
| DQM93_RS04900 () | 922624..923631 | + | 1008 | WP_001244692.1 | Ferric enterobactin transport system permease protein FepD | VF |
| DQM93_RS04905 () | 923631..924638 | + | 1008 | WP_001180357.1 | putative siderophore transport system permease protein YfhA | VF |
| DQM93_RS04910 () | 924638..925432 | + | 795 | WP_000677519.1 | Petrobactin import ATP-binding protein FpuD | VF |
| DQM93_RS04915 () | 925820..926209 | + | 390 | WP_074017679.1 | restriction endonuclease subunit S | - |
| DQM93_RS11025 () | 926175..926489 | + | 315 | WP_161801538.1 | hypothetical protein | - |
| DQM93_RS04925 () | 927173..927334 | + | 162 | WP_000368174.1 | hypothetical protein | - |
| DQM93_RS04930 () | 927426..929105 | + | 1680 | WP_000031832.1 | Tn3 family transposase TnpR_ISAcsp1 | Transposase |
| DQM93_RS04935 () | 929373..929939 | + | 567 | WP_000234985.1 | hypothetical protein | - |
| DQM93_RS04940 () | 930261..930449 | + | 189 | WP_000179772.1 | hypothetical protein | - |
| DQM93_RS04945 () | 930511..931326 | + | 816 | WP_000262006.1 | ATP-grasp domain-containing protein | - |
| DQM93_RS04950 () | 931326..932180 | + | 855 | WP_000900020.1 | ADP-ribosylglycohydrolase family protein | - |
| DQM93_RS04955 () | 932292..933176 | + | 885 | WP_000710119.1 | diacylglycerol kinase family lipid kinase | - |
| DQM93_RS04960 () | 933339..935078 | + | 1740 | WP_000423451.1 | glycoside hydrolase family 13 protein | - |
| DQM93_RS04965 () | 935164..935481 | + | 318 | WP_000995820.1 | hypothetical protein | - |
| DQM93_RS04970 () | 935527..935808 | + | 282 | WP_000266233.1 | hypothetical protein | - |
| DQM93_RS04975 () | 936253..936729 | + | 477 | WP_000579612.1 | helix-turn-helix domain-containing protein | Antitoxin Detail |
| DQM93_RS04980 () | 936729..937490 | + | 762 | WP_000405357.1 | zeta toxin family protein | Toxin Detail |
| DQM93_RS04985 () | 937518..938674 | + | 1157 | Protein_923 | hypothetical protein | - |
| DQM93_RS04995 () | 939506..939865 | + | 360 | WP_000529543.1 | hypothetical protein | - |
| DQM93_RS05000 () | 939875..940204 | + | 330 | WP_000263037.1 | MobC family plasmid mobilization relaxosome protein | - |
| DQM93_RS11165 () | 940227..942112 | + | 1886 | Protein_926 | relaxase/mobilization nuclease domain-containing protein | - |
| DQM93_RS05020 () | 942157..943011 | - | 855 | WP_000837499.1 | XRE/MutR family transcriptional regulator | - |
| DQM93_RS10925 () | 943092..943163 | + | 72 | WP_001809668.1 | peptide pheromone SHP3 | - |
| DQM93_RS05025 () | 943263..944558 | + | 1296 | WP_000794307.1 | nucleotide sugar dehydrogenase | - |
| DQM93_RS05030 () | 944542..945168 | + | 627 | WP_000862562.1 | PIG-L family deacetylase | - |
| DQM93_RS05035 () | 945178..945960 | + | 783 | WP_000809423.1 | sugar phosphate isomerase/epimerase | - |
| DQM93_RS05040 () | 945983..947875 | + | 1893 | WP_000710678.1 | hypothetical protein | - |
| DQM93_RS05045 () | 947904..949010 | + | 1107 | WP_000444113.1 | hypothetical protein | - |
| DQM93_RS05050 () | 949018..950328 | + | 1311 | WP_000423517.1 | AMP-binding protein | - |
| DQM93_RS05055 () | 950330..951553 | + | 1224 | WP_000252068.1 | ATP phosphoribosyltransferase regulatory subunit | - |
| DQM93_RS05060 () | 951543..952493 | + | 951 | WP_000389975.1 | hypothetical protein | - |
| DQM93_RS05065 () | 952508..953707 | + | 1200 | WP_000238677.1 | ATP-grasp domain-containing protein | - |
| DQM93_RS05070 () | 953726..954370 | + | 645 | WP_000270072.1 | Putative acetyltransferase EpsM | VF |
| DQM93_RS05075 () | 954753..955964 | + | 1212 | WP_000687010.1 | MFS transporter | - |
| DQM93_RS05080 () | 956623..956844 | + | 222 | WP_000286251.1 | helix-turn-helix domain-containing protein | - |
| DQM93_RS05090 () | 957363..957602 | + | 240 | Protein_941 | transposase family protein | - |
| DQM93_RS05095 () | 957746..958975 | + | 1230 | WP_000703358.1 | FtsW/RodA/SpoVE family cell cycle protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Streptococcus pneumoniae R6 | Genomic island | TA6282 | NC_003098 | 920239..953000 | 0 |