MGE detailed information
MGE type: Prophage MGE length: 38920 bp
Accession: NZ_LS483350 Location: 1853456..1892375 Organism: Staphylococcus aureus strain NCTC11940 Replicon: chromosome
Accession: NZ_LS483350 Location: 1853456..1892375 Organism: Staphylococcus aureus strain NCTC11940 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| DQM92_RS09245 () | 1849269..1850015 | - | 747 | WP_002868962.1 | S9 family peptidase | - |
| DQM92_RS09250 () | 1850020..1850493 | - | 474 | WP_000672014.1 | nucleoside triphosphatase YtkD | - |
| DQM92_RS09255 () | 1850559..1850816 | + | 258 | WP_000718107.1 | membrane protein insertion efficiency factor YidD | - |
| DQM92_RS09260 () | 1850813..1851814 | - | 1002 | WP_000778523.1 | o-succinylbenzoate synthase | - |
| DQM92_RS09265 () | 1851819..1853297 | - | 1479 | WP_000348360.1 | o-succinylbenzoate--CoA ligase | - |
| DQM92_RS09270 () | 1853456..1853911 | - | 456 | WP_011443643.1 | DUF4909 domain-containing protein | - |
| DQM92_RS09275 () | 1854214..1854864 | + | 651 | WP_001795535.1 | excalibur calcium-binding domain-containing protein | - |
| DQM92_RS09280 () | 1854945..1855940 | + | 996 | WP_000070653.1 | DUF4352 domain-containing protein | - |
| DQM92_RS09285 () | 1856016..1856642 | + | 627 | WP_000669046.1 | hypothetical protein | - |
| DQM92_RS09290 () | 1856683..1857027 | + | 345 | WP_000627551.1 | DUF3969 family protein | - |
| DQM92_RS09295 () | 1857125..1857676 | + | 552 | WP_000414205.1 | hypothetical protein | - |
| DQM92_RS09300 () | 1857894..1858535 | - | 642 | WP_000494956.1 | ImmA/IrrE family metallo-endopeptidase | - |
| DQM92_RS09305 () | 1858649..1858834 | - | 186 | WP_000809857.1 | hypothetical protein | - |
| DQM92_RS09310 () | 1858836..1859012 | - | 177 | WP_000375476.1 | hypothetical protein | - |
| DQM92_RS09315 () | 1859023..1859406 | - | 384 | WP_000070811.1 | hypothetical protein | - |
| DQM92_RS09325 () | 1860010..1860153 | - | 144 | WP_001549059.1 | IS3 family transposase IS655 | Transposase |
| DQM92_RS09335 () | 1860356..1860451 | + | 96 | WP_001801861.1 | type I toxin-antitoxin system Fst family toxin PepA1 | Toxin Detail |
| - () | 1860479..1860538 | - | 60 | - | - | Antitoxin Detail |
| DQM92_RS09340 () | 1860574..1860675 | + | 102 | WP_001791893.1 | hypothetical protein | - |
| DQM92_RS09345 () | 1860653..1860829 | - | 177 | Protein_1755 | transposase | - |
| DQM92_RS09350 () | 1861023..1861400 | - | 378 | WP_001037045.1 | DUF1433 domain-containing protein | - |
| DQM92_RS09355 () | 1861921..1866033 | - | 4113 | WP_000831218.1 | ATP-binding protein | - |
| DQM92_RS09360 () | 1866883..1868082 | - | 1200 | WP_000072576.1 | restriction endonuclease subunit S | - |
| DQM92_RS09365 () | 1868075..1869631 | - | 1557 | WP_000028659.1 | type I restriction-modification system subunit M | - |
| DQM92_RS09370 () | 1869795..1869929 | - | 135 | WP_001791797.1 | hypothetical protein | - |
| DQM92_RS09375 () | 1869994..1870713 | - | 720 | WP_001038688.1 | Serine protease SplF | VF |
| DQM92_RS09380 () | 1870864..1871580 | - | 717 | WP_001038759.1 | Serine protease SplE | VF |
| DQM92_RS09385 () | 1871682..1871789 | + | 108 | WP_011447030.1 | hypothetical protein | - |
| DQM92_RS09390 () | 1871738..1872457 | - | 720 | WP_001038704.1 | Serine protease SplD | VF |
| DQM92_RS09395 () | 1872578..1873297 | - | 720 | WP_001038867.1 | Serine protease SplC | VF |
| DQM92_RS09400 () | 1873355..1874077 | - | 723 | WP_001039447.1 | Serine protease SplB | VF |
| DQM92_RS09405 () | 1874202..1874909 | - | 708 | WP_001039435.1 | Serine protease SplA | VF |
| DQM92_RS09415 () | 1875872..1876438 | + | 567 | WP_001092763.1 | DUF4888 domain-containing protein | - |
| DQM92_RS09420 () | 1876912..1877610 | - | 699 | WP_000586140.1 | hypothetical protein | - |
| DQM92_RS09425 () | 1877607..1878368 | - | 762 | WP_111724820.1 | lantibiotic immunity ABC transporter MutE/EpiE family permease subunit | - |
| DQM92_RS09430 () | 1878365..1879057 | - | 693 | WP_001096791.1 | Bacitracin transport ATP-binding protein BcrA | VF |
| DQM92_RS09435 () | 1879080..1880453 | - | 1374 | WP_000691541.1 | S8 family serine peptidase | - |
| DQM92_RS09440 () | 1880463..1880981 | - | 519 | WP_000504439.1 | flavoprotein | - |
| DQM92_RS09445 () | 1880997..1882241 | - | 1245 | WP_000566596.1 | lanthionine synthetase C family protein | - |
| DQM92_RS09450 () | 1882234..1883976 | - | 1743 | WP_001803290.1 | lantibiotic dehydratase | - |
| DQM92_RS09455 () | 1884041..1884184 | - | 144 | WP_000416756.1 | gallidermin/nisin family lantibiotic | - |
| DQM92_RS09465 () | 1884921..1885064 | - | 144 | WP_000416759.1 | gallidermin/nisin family lantibiotic | - |
| DQM92_RS09470 () | 1885305..1886288 | - | 984 | WP_000782464.1 | Leucotoxin LukDv | VF |
| DQM92_RS09475 () | 1886290..1887225 | - | 936 | WP_000473596.1 | Leucotoxin LukEv | VF |
| DQM92_RS09480 () | 1888025..1888564 | + | 540 | WP_001790220.1 | hypothetical protein | - |
| DQM92_RS09485 () | 1888577..1889365 | + | 789 | WP_000206350.1 | DUF1828 domain-containing protein | - |
| DQM92_RS09490 () | 1889826..1890034 | + | 209 | Protein_1782 | hypothetical protein | - |
| DQM92_RS09540 () | 1891821..1892375 | - | 555 | WP_000132890.1 | alpha/beta hydrolase | - |
| DQM92_RS09550 () | 1892698..1894098 | - | 1401 | WP_000167538.1 | protoporphyrinogen oxidase | - |
| DQM92_RS09555 () | 1894122..1895045 | - | 924 | WP_000162881.1 | ferrochelatase | - |
| DQM92_RS09560 () | 1895103..1896140 | - | 1038 | WP_000233526.1 | uroporphyrinogen decarboxylase | - |
| DQM92_RS09565 () | 1896130..1896240 | - | 111 | WP_001790154.1 | hypothetical protein | - |
| DQM92_RS09570 () | 1896403..1896906 | + | 504 | WP_000737976.1 | signal transduction protein TRAP | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Staphylococcus aureus subsp. aureus str. Newman | Prophage | TA10024 | NC_009641 | 1882747..1922929 | 0.001 |