NZ_LR8904671..160530

MGE detailed information

MGE type: Conjugative plasmid        MGE length: 160530 bp
Accession: NZ_LR890467        Location: 1..160530         Organism: Escherichia coli isolate MSB1_7A-sc-2280394       Replicon: plasmid 2


Gene structure


The 5 kb flanking regions of this MGE are displayed.

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
JMW16_RS24515 () 1..978 + 978 WP_000361610.1 RepB family plasmid replication initiator protein -
JMW16_RS24520 () 1263..2003 - 741 WP_001066941.1 tyrosine-type recombinase/integrase -
JMW16_RS24525 () 2124..2312 - 189 WP_001309252.1 hypothetical protein -
JMW16_RS24530 () 2679..3848 + 1170 WP_001072358.1 hypothetical protein -
JMW16_RS24535 () 4074..4249 - 176 Protein_4 IS3 family transposase -
JMW16_RS24540 () 4695..4967 - 273 WP_001322642.1 adhesin biosynthesis transcription regulatory family protein -
JMW16_RS24545 () 5492..5928 - 437 Protein_6 IS3 family transposase IS2 Transposase
JMW16_RS24550 () 6210..8180 + 1971 WP_001298664.1 Hemin receptor VF
JMW16_RS24555 () 8187..8978 + 792 WP_000977394.1 DUF4198 domain-containing protein -
JMW16_RS24560 () 9041..9649 - 609 Protein_9 IS66 family transposase ISEc22 Transposase
JMW16_RS24565 () 9717..10499 - 783 WP_001300609.1 IS21 family transposase IS100kyp Transposase
JMW16_RS24570 () 10496..11518 - 1023 WP_001310017.1 IS21 family transposase IS100kyp Transposase
JMW16_RS24575 () 11604..12549 - 946 Protein_12 IS66 family transposase ISEc8 Transposase
JMW16_RS24580 () 12598..12945 - 348 WP_000612626.1 IS66 family transposase ISKpn24 Transposase
JMW16_RS24585 () 12942..13346 - 405 WP_000839179.1 IS66 family transposase ISEc22 Transposase
JMW16_RS24590 () 13375..13758 - 384 Protein_15 IS3 family transposase IS629 Transposase
JMW16_RS24595 () 13848..15356 - 1509 WP_001189113.1 group II intron reverse transcriptase/maturase -
JMW16_RS24600 () 16029..16768 - 740 Protein_17 IS3 family transposase IS629 Transposase
JMW16_RS24605 () 16794..17099 + 306 Protein_18 IS91 family transposase ISSbo1 Transposase
JMW16_RS24610 () 17622..18797 - 1176 WP_001020413.1 putative protein YncE VF
JMW16_RS24615 () 18866..21127 - 2262 WP_001100763.1 TonB-dependent receptor -
JMW16_RS24620 () 21296..22072 - 777 WP_000981091.1 energy transducer TonB -
JMW16_RS24625 () 22080..22955 - 876 WP_001224623.1 ChaN family lipoprotein -
JMW16_RS24630 () 23287..23834 - 548 Protein_23 replication initiation protein -
JMW16_RS24635 () 25406..25741 - 336 WP_001080732.1 colicin transporter -
JMW16_RS24640 () 25870..26217 + 348 WP_000142452.1 hypothetical protein -
JMW16_RS24645 () 26237..26746 - 510 WP_000194542.1 hypothetical protein -
JMW16_RS24650 () 26743..27003 - 261 WP_000371882.1 hypothetical protein -
JMW16_RS24655 () 27105..27844 + 740 Protein_28 IS3 family transposase IS629 Transposase
JMW16_RS24660 () 28517..28831 + 315 Protein_29 IS5 family transposase ISKpn26 Transposase
JMW16_RS24665 () 28832..29005 + 174 Protein_30 IS5 family transposase ISKpn26 Transposase
JMW16_RS24670 () 29155..29788 - 634 Protein_31 histidine-type phosphatase -
JMW16_RS24675 () 29910..30395 - 486 WP_000874189.1 hypothetical protein -
JMW16_RS24680 () 30420..30905 - 486 WP_001267176.1 TlpA family protein disulfide reductase -
JMW16_RS24685 () 30892..31587 - 696 WP_000117262.1 Lipoprotein-releasing system ATP-binding protein LolD VF
JMW16_RS24690 () 31592..32722 - 1131 WP_000729220.1 ABC transporter permease -
JMW16_RS24695 () 32712..33995 - 1284 WP_000964653.1 ABC transporter permease -
JMW16_RS24700 () 33998..35377 - 1380 WP_000119836.1 DUF2318 domain-containing protein -
JMW16_RS24705 () 35481..36008 - 528 WP_000178050.1 iron transporter -
JMW16_RS24710 () 36049..37935 - 1887 WP_000118029.1 FTR1 family iron permease -
JMW16_RS24715 () 38282..39097 - 816 WP_012372823.1 Na(+)-translocating NADH-quinone reductase subunit C -
JMW16_RS24720 () 39280..39786 - 507 WP_000949452.1 protein disulfide oxidoreductase -
JMW16_RS24725 () 39776..39934 - 159 WP_000449408.1 DsbA family protein -
JMW16_RS24730 () 40084..40197 - 114 Protein_43 IS6 family transposase -
JMW16_RS24735 () 40397..41094 + 698 Protein_44 IS1 family transposase IS1R Transposase
JMW16_RS24740 () 41109..41327 + 219 Protein_45 IS4 family transposase -
JMW16_RS24745 () 41377..42081 - 705 WP_001067858.1 IS6 family transposase IS15DI Transposase
JMW16_RS24750 () 42140..42889 - 750 Protein_47 IS91 family transposase ISAzo26 Transposase
JMW16_RS24755 () 43047..43520 + 474 WP_001389366.1 trimethoprim-resistant dihydrofolate reductase DfrA17 -
JMW16_RS24760 () 43651..44439 + 789 WP_000503573.1 Streptomycin 3''-adenylyltransferase ARG
JMW16_RS24765 () 44645..44992 + 348 WP_000679427.1 Multidrug transporter EmrE ARG
JMW16_RS24770 () 44986..45825 + 840 WP_000259031.1 Dihydropteroate synthase ARG
JMW16_RS24775 () 45953..46156 + 204 WP_000376616.1 hypothetical protein -
JMW16_RS24780 () 46312..47517 + 1206 WP_000184001.1 chromate efflux transporter -
JMW16_RS24785 () 47528..47833 + 306 WP_000130000.1 Transcriptional regulator Relaxase
JMW16_RS24790 () 47877..47942 + 66 Protein_55 EAL domain-containing protein -
JMW16_RS24795 () 48060..48824 + 765 WP_001389365.1 IS6 family transposase IS6100 Transposase
JMW16_RS24800 () 49317..49901 - 585 WP_001137892.1 TetR family transcriptional regulator -
JMW16_RS24805 () 49901..51139 - 1239 WP_000004159.1 MFS transporter -
JMW16_RS24810 () 51136..52041 - 906 WP_000219391.1 hypothetical protein ARG
JMW16_RS24815 () 52163..52867 - 705 WP_001067855.1 IS6 family transposase IS26 Transposase
JMW16_RS24820 () 52928..53104 + 177 Protein_61 replication protein C -
JMW16_RS24825 () 53412..54227 + 816 WP_001043260.1 Dihydropteroate synthase ARG
JMW16_RS24830 () 54288..55091 + 804 WP_001082319.1 Aminoglycoside 3'-phosphotransferase ARG
JMW16_RS24835 () 55091..55927 + 837 WP_000480972.1 hypothetical protein ARG
JMW16_RS24840 () 55981..56217 + 237 WP_042005022.1 hypothetical protein -
JMW16_RS24845 () 56249..56875 - 627 WP_031606906.1 tetracycline resistance transcriptional repressor TetR(A) -
JMW16_RS24850 () 56981..58180 + 1200 WP_000804064.1 Tetracycline resistance protein, class C ARG
JMW16_RS24855 () 58212..58442 - 231 Protein_68 EamA family transporter -
JMW16_RS24860 () 58497..59201 - 705 WP_001067858.1 IS6 family transposase IS15DI Transposase
JMW16_RS24865 () 59267..60182 - 916 Protein_70 IS1182 family transposase ISCfr1 Transposase
JMW16_RS24870 () 60297..61433 - 1137 WP_000080860.1 DUF3883 domain-containing protein -
JMW16_RS24875 () 61484..61711 - 228 WP_000248278.1 hypothetical protein -
JMW16_RS24880 () 61735..61926 + 192 WP_000951934.1 hypothetical protein -
JMW16_RS24885 () 62408..62854 - 447 Protein_74 tunicamycin resistance protein -
JMW16_RS24890 () 62918..63622 + 705 WP_001067858.1 IS6 family transposase IS15DI Transposase
JMW16_RS24895 () 63674..63823 + 150 Protein_76 type II toxin-antitoxin system antitoxin PemI -
JMW16_RS24900 () 63756..64157 + 402 WP_001398199.1 type II toxin-antitoxin system toxin endoribonuclease PemK -
JMW16_RS24905 () 64442..65752 + 1311 WP_001262765.1 DUF262 domain-containing protein -
JMW16_RS24910 () 65781..65879 + 99 Protein_79 IS1 family transposase -
JMW16_RS24915 () 66029..66889 - 861 WP_000027057.1 Beta-lactamase TEM ARG
JMW16_RS24920 () 67072..67629 - 558 WP_001235713.1 Tn3 family transposase TnpR_Tn3 Transposase
JMW16_RS24925 () 67793..68182 + 390 Protein_82 Tn3 family transposase TnpA_Tn3 Transposase
JMW16_RS24930 () 68250..69347 - 1098 Protein_83 TonB-dependent receptor -
JMW16_RS24935 () 69404..70372 - 969 WP_013362812.1 IS5 family transposase IS903B Transposase
JMW16_RS24940 () 70407..71282 - 876 WP_032277257.1 Beta-lactamase CTX-M-97 ARG
JMW16_RS24945 () 71532..71711 - 180 Protein_86 IS1380 family transposase -
JMW16_RS24950 () 71776..72480 + 705 WP_001067855.1 IS6 family transposase IS26 Transposase
JMW16_RS24955 () 72803..74335 - 1533 WP_013362816.1 IS91 family transposase ISVsa3 Transposase
JMW16_RS24960 () 74562..74903 - 342 WP_023909256.1 60 kDa chaperonin VF
JMW16_RS24965 () 74864..75313 - 450 WP_013362817.1 hypothetical protein -
JMW16_RS24970 () 75828..75998 - 171 WP_170852050.1 rRNA adenine methyltransferase -
JMW16_RS24975 () 75943..76680 - 738 WP_013362818.1 rRNA adenine N-6-methyltransferase ARG
JMW16_RS24980 () 76806..76901 - 96 WP_013362819.1 23S rRNA methyltransferase attenuation leader peptide -
JMW16_RS24985 () 77036..77740 + 705 WP_001067855.1 IS6 family transposase IS26 Transposase
JMW16_RS24990 () 77806..78351 + 546 Protein_95 Tn3 family transposase TnpA_Tn3 Transposase
JMW16_RS24995 () 78387..78802 - 416 Protein_96 IS1 family transposase -
JMW16_RS25000 () 79051..79452 - 402 WP_001398199.1 type II toxin-antitoxin system toxin endoribonuclease PemK -
JMW16_RS25005 () 79385..79642 - 258 WP_000557619.1 type II toxin-antitoxin system antitoxin PemI -
JMW16_RS25010 () 79735..80388 - 654 WP_000616807.1 CPBP family intramembrane metalloprotease -
JMW16_RS25015 () 81328..82185 - 858 WP_001617855.1 incFII family plasmid replication initiator RepA -
JMW16_RS25020 () 82178..82252 - 75 WP_031943482.1 RepA leader peptide Tap -
JMW16_RS25025 () 82249..82383 - 135 Protein_102 protein CopA/IncA -
JMW16_RS25030 () 82489..82743 - 255 WP_000083850.1 replication regulatory protein RepA -
JMW16_RS25035 () 83040..83174 - 135 WP_023144756.1 type I toxin-antitoxin system Hok family toxin Toxin Detail
- () 83219..83279 + 61 NuclAT_1 - Antitoxin Detail
- () 83219..83279 + 61 NuclAT_1 - Antitoxin Detail
- () 83219..83279 + 61 NuclAT_1 - Antitoxin Detail
- () 83219..83279 + 61 NuclAT_1 - Antitoxin Detail
JMW16_RS25040 () 83246..83532 - 287 Protein_105 DUF2726 domain-containing protein -
JMW16_RS25045 () 84045..84257 - 213 WP_013023861.1 hypothetical protein -
JMW16_RS25050 () 84388..84948 - 561 WP_000139341.1 fertility inhibition protein FinO -
JMW16_RS25055 () 85003..85749 - 747 WP_000205725.1 conjugal transfer pilus acetylase TraX -
JMW16_RS25060 () 85769..91039 - 5271 WP_032153768.1 Multifunctional conjugation protein TraI Relaxase
JMW16_RS25065 () 91039..93309 - 2271 WP_094283620.1 type IV conjugative transfer system coupling protein TraD -
JMW16_RS25070 () 93306..94085 - 780 WP_000199914.1 hypothetical protein -
JMW16_RS25075 () 94288..95019 - 732 WP_000850429.1 complement resistance protein TraT -
JMW16_RS25080 () 95051..95548 - 498 WP_000605862.1 entry exclusion protein -
JMW16_RS25085 () 95567..98386 - 2820 WP_001007062.1 conjugal transfer mating pair stabilization protein TraG -
JMW16_RS25090 () 98383..99756 - 1374 WP_000944328.1 conjugal transfer protein TraH -
JMW16_RS25095 () 99743..100168 - 426 WP_001348758.1 F-type conjugal transfer protein TrbF -
JMW16_RS25100 () 100116..100463 - 348 WP_071571857.1 P-type conjugative transfer protein TrbJ -
JMW16_RS25105 () 100393..100938 - 546 WP_000059829.1 type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB -
JMW16_RS25110 () 100925..101209 - 285 WP_001617873.1 type-F conjugative transfer system pilin chaperone TraQ -
JMW16_RS25115 () 101336..101656 - 321 WP_001348757.1 conjugal transfer protein TrbA -
JMW16_RS25120 () 101704..102401 - 698 Protein_121 IS1 family transposase IS1G Transposase
JMW16_RS25125 () 102556..103536 - 981 WP_000019450.1 IS5 family transposase ISKpn26 Transposase
JMW16_RS25130 () 103666..104409 - 744 WP_001030401.1 type-F conjugative transfer system pilin assembly protein TraF -
JMW16_RS25135 () 104402..104659 - 258 WP_000864347.1 conjugal transfer protein TrbE -
JMW16_RS25140 () 104686..106536 - 1851 WP_000821866.1 type-F conjugative transfer system mating-pair stabilization protein TraN -
JMW16_RS25145 () 106533..107171 - 639 WP_001080259.1 type-F conjugative transfer system pilin assembly protein TrbC -
JMW16_RS25150 () 107180..107485 - 306 WP_000224413.1 hypothetical protein -
JMW16_RS25155 () 107515..108507 - 993 WP_000830190.1 conjugal transfer pilus assembly protein TraU -
JMW16_RS25160 () 108504..109136 - 633 WP_001203727.1 type-F conjugative transfer system protein TraW -
JMW16_RS25165 () 109133..109519 - 387 WP_000214084.1 type-F conjugative transfer system protein TrbI -
JMW16_RS25170 () 109516..112143 - 2628 WP_001064258.1 type IV secretion system protein TraC -
JMW16_RS25175 () 112303..112524 - 222 WP_001278694.1 conjugal transfer protein TraR -
JMW16_RS25180 () 112659..113174 - 516 WP_000809886.1 type IV conjugative transfer system lipoprotein TraV -
JMW16_RS25185 () 113174..113533 - 360 WP_001617876.1 conjugal transfer protein TrbD -
JMW16_RS25190 () 113472..114059 - 588 WP_013023871.1 conjugal transfer protein TraP -
JMW16_RS25195 () 114028..115479 - 1452 WP_000146687.1 conjugal transfer protein TraB -
JMW16_RS25200 () 115479..116183 - 705 WP_148725207.1 type-F conjugative transfer system secretin TraK -
JMW16_RS25205 () 116194..116760 - 567 WP_000399791.1 type IV conjugative transfer system protein TraE -
JMW16_RS25210 () 116782..117093 - 312 WP_000012107.1 type IV conjugative transfer system protein TraL -
JMW16_RS25215 () 117098..117460 - 363 WP_000338606.1 type IV conjugative transfer system pilin TraA -
JMW16_RS25220 () 117494..117721 - 228 WP_001254388.1 conjugal transfer relaxosome protein TraY -
JMW16_RS25225 () 117809..118486 - 678 WP_001348626.1 PAS domain-containing protein -
JMW16_RS25230 () 118620..119003 - 384 WP_001151566.1 relaxosome protein TraM -
JMW16_RS25235 () 119334..119936 + 603 WP_000243712.1 hypothetical protein VF
JMW16_RS25240 () 120233..121054 - 822 WP_001234469.1 DUF945 domain-containing protein -
JMW16_RS25245 () 121173..121460 - 288 WP_000107535.1 hypothetical protein -
JMW16_RS25250 () 121485..121691 - 207 WP_000275859.1 hypothetical protein -
JMW16_RS25255 () 122382..122540 - 159 WP_001312861.1 type I toxin-antitoxin system Hok family toxin Toxin Detail
- () 122584..122808 - 225 NuclAT_0 - Antitoxin Detail
- () 122584..122808 - 225 NuclAT_0 - Antitoxin Detail
- () 122584..122808 - 225 NuclAT_0 - Antitoxin Detail
- () 122584..122808 - 225 NuclAT_0 - Antitoxin Detail
JMW16_RS25260 () 122620..122808 + 189 WP_001299721.1 hypothetical protein -
JMW16_RS25265 () 122820..123539 - 720 WP_001276232.1 plasmid SOS inhibition protein A -
JMW16_RS25270 () 123536..123970 - 435 WP_000845940.1 conjugation system SOS inhibitor PsiB -
JMW16_RS25275 () 124025..125983 - 1959 WP_000117179.1 ParB/RepB/Spo0J family partition protein -
JMW16_RS25280 () 126049..126282 - 234 WP_000005990.1 DUF905 family protein -
JMW16_RS25285 () 126345..126884 - 540 WP_000290841.1 single-stranded DNA-binding protein -
JMW16_RS25290 () 127527..127757 - 231 WP_021526513.1 hypothetical protein -
JMW16_RS25295 () 127783..128346 - 564 WP_001348621.1 class I SAM-dependent methyltransferase -
JMW16_RS25300 () 128394..129755 - 1362 WP_000170714.1 DUF3560 domain-containing protein -
JMW16_RS25305 () 129807..130037 - 231 WP_000218642.1 hypothetical protein -
JMW16_RS25310 () 131072..131263 - 192 WP_001027516.1 hypothetical protein -
JMW16_RS25315 () 131260..131682 - 423 WP_000271753.1 DUF1380 family protein -
JMW16_RS25320 () 131729..132031 - 303 WP_001671341.1 antirestriction protein -
JMW16_RS25325 () 132571..133347 - 777 WP_001753849.1 hypothetical protein -
JMW16_RS25330 () 133398..133832 - 435 WP_000274437.1 DUF1380 family protein -
JMW16_RS25335 () 133846..134067 - 222 WP_001104873.1 hypothetical protein -
JMW16_RS25340 () 134068..134751 - 684 WP_000086185.1 DNA methylase -
JMW16_RS25345 () 134828..135132 - 305 Protein_166 hypothetical protein -
JMW16_RS25350 () 135136..136038 - 903 WP_001348615.1 DUF1281 domain-containing protein -
JMW16_RS25355 () 136905..137876 - 972 WP_000817036.1 ParB/RepB/Spo0J family plasmid partition protein -
JMW16_RS25360 () 137876..139042 - 1167 WP_000772446.1 hypothetical protein VF
JMW16_RS25365 () 139630..140385 - 756 WP_000852146.1 replication initiation protein RepE -
JMW16_RS25370 () 141159..141965 - 807 WP_000016982.1 site-specific integrase -
JMW16_RS25375 () 141966..142271 - 306 WP_001159868.1 type II toxin-antitoxin system toxin CcdB Toxin Detail
JMW16_RS25380 () 142273..142491 - 219 WP_000813634.1 type II toxin-antitoxin system antitoxin CcdA Antitoxin Detail
JMW16_RS25385 () 143199..144194 + 996 WP_000246636.1 hypothetical protein -
JMW16_RS25390 () 144198..145130 + 933 WP_000991832.1 hypothetical protein -
JMW16_RS25395 () 145267..145964 - 698 Protein_176 IS1 family transposase IS1G Transposase
JMW16_RS25400 () 146020..148497 - 2478 Protein_177 HsdR family type I site-specific deoxyribonuclease -
JMW16_RS25405 () 148619..149902 - 1284 WP_001617890.1 restriction endonuclease subunit S -
JMW16_RS25410 () 149899..151455 - 1557 WP_001617892.1 type I restriction-modification system subunit M -
JMW16_RS25415 () 151638..151859 + 222 WP_001190712.1 type II toxin-antitoxin system Phd/YefM family antitoxin Antitoxin Detail
JMW16_RS25420 () 151859..152239 + 381 WP_001216034.1 type II toxin-antitoxin system death-on-curing family toxin Toxin Detail
JMW16_RS25425 () 152244..152423 + 180 WP_001513661.1 hypothetical protein -
JMW16_RS25430 () 152451..152810 + 360 WP_001513660.1 hypothetical protein -
JMW16_RS25435 () 152734..153147 + 414 Protein_184 IS3 family transposase ISLad1 Transposase
JMW16_RS25440 () 153097..153414 - 318 WP_001513659.1 hypothetical protein -
JMW16_RS25445 () 153642..154658 - 1017 WP_012372828.1 IS5 family transposase IS5D Transposase
JMW16_RS25450 () 154866..156269 + 1404 WP_001373486.1 S-methylmethionine permease -
JMW16_RS25455 () 156256..157188 + 933 WP_000081352.1 homocysteine S-methyltransferase -
JMW16_RS25460 () 157297..157626 - 330 Protein_189 TOBE domain-containing protein -
JMW16_RS25465 () 157642..158339 - 698 Protein_190 IS1 family transposase IS1R Transposase
JMW16_RS25470 () 158397..158645 + 249 Protein_191 abortive infection family protein -
JMW16_RS25475 () 159014..159745 - 732 WP_001617898.1 hypothetical protein -

Similar MGE(s)


Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.

Detail Organism MGE type Related TA Genome accession Coordinates Mash
distance